EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003509 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 492 bases
Position: chrJH651653.1:861042-861533
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004601	RRM_1	PF00076.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004688	-	453	-	ENSODEP00000004601	150 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003509	-	69	70.192	ENSODEG00000002374	-	82	68.217
ENSODEG00000003509	-	53	81.013	ENSODEG00000009724	-	63	61.146
ENSODEG00000003509	-	55	33.333	ENSODEG00000012711	-	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003509	-	65	88.660	ENSAPLG00000013776	SRSF3	89	85.135	Anas_platyrhynchos
ENSODEG00000003509	-	59	65.909	ENSCSAVG00000002676	-	68	58.594	Ciona_savignyi
ENSODEG00000003509	-	69	80.769	ENSCGRG00001024550	-	90	78.082	Cricetulus_griseus_chok1gshd
ENSODEG00000003509	-	97	69.655	ENSCGRG00001006656	-	79	73.846	Cricetulus_griseus_chok1gshd
ENSODEG00000003509	-	97	69.655	ENSCGRG00000007542	-	79	73.846	Cricetulus_griseus_crigri
ENSODEG00000003509	-	69	80.769	ENSCGRG00000019294	-	94	78.082	Cricetulus_griseus_crigri
ENSODEG00000003509	-	69	63.462	ENSEBUG00000002633	-	72	52.414	Eptatretus_burgeri
ENSODEG00000003509	-	64	85.417	ENSPKIG00000001408	-	88	81.081	Paramormyrops_kingsleyae
ENSODEG00000003509	-	70	71.429	ENSPCIG00000007090	-	79	68.462	Phascolarctos_cinereus