EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 825 bases
Position: chrJH651736.1:3081264-3082088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004631	Brix	PF04427.18	6.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004718	-	765	-	ENSODEP00000004631	254 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003531	-	99	74.231	ENSODEG00000006939	-	99	74.231
ENSODEG00000003531	-	100	77.818	ENSODEG00000019144	-	90	77.818
ENSODEG00000003531	-	100	80.727	ENSODEG00000013529	-	96	79.457
ENSODEG00000003531	-	100	74.809	ENSODEG00000006584	-	89	74.809
ENSODEG00000003531	-	96	69.318	ENSODEG00000002442	-	90	69.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003531	-	100	78.182	ENSG00000197498	RPF2	96	75.122	Homo_sapiens
ENSODEG00000003531	-	100	62.545	ENSAPOG00000005714	rpf2	89	62.545	Acanthochromis_polyacanthus
ENSODEG00000003531	-	100	78.182	ENSAMEG00000015753	RPF2	90	78.182	Ailuropoda_melanoleuca
ENSODEG00000003531	-	57	67.586	ENSACIG00000006659	rpf2	87	67.586	Amphilophus_citrinellus
ENSODEG00000003531	-	100	62.545	ENSAOCG00000005173	rpf2	89	62.545	Amphiprion_ocellaris
ENSODEG00000003531	-	100	62.545	ENSAPEG00000004003	rpf2	89	62.545	Amphiprion_percula
ENSODEG00000003531	-	100	61.455	ENSATEG00000012818	rpf2	90	61.455	Anabas_testudineus
ENSODEG00000003531	-	95	70.229	ENSAPLG00000008812	RPF2	96	70.229	Anas_platyrhynchos
ENSODEG00000003531	-	100	67.636	ENSACAG00000011270	RPF2	89	67.636	Anolis_carolinensis
ENSODEG00000003531	-	94	64.751	ENSANAG00000033736	-	87	65.900	Aotus_nancymaae
ENSODEG00000003531	-	100	79.623	ENSANAG00000026549	-	90	79.623	Aotus_nancymaae
ENSODEG00000003531	-	100	70.115	ENSANAG00000025459	-	90	65.182	Aotus_nancymaae
ENSODEG00000003531	-	100	70.545	ENSANAG00000034834	-	89	70.545	Aotus_nancymaae
ENSODEG00000003531	-	100	61.567	ENSANAG00000021067	-	88	60.448	Aotus_nancymaae
ENSODEG00000003531	-	100	60.364	ENSAMXG00000035201	rpf2	89	60.364	Astyanax_mexicanus
ENSODEG00000003531	-	100	79.554	ENSBTAG00000016584	RPF2	90	79.554	Bos_taurus
ENSODEG00000003531	-	100	36.957	WBGene00021830	Y54E10A.10	93	36.957	Caenorhabditis_elegans
ENSODEG00000003531	-	100	77.818	ENSCJAG00000038330	RPF2	91	82.805	Callithrix_jacchus
ENSODEG00000003531	-	100	77.455	ENSCAFG00000003918	RPF2	90	77.818	Canis_familiaris
ENSODEG00000003531	-	100	80.000	ENSCHIG00000022499	RPF2	90	80.000	Capra_hircus
ENSODEG00000003531	-	100	76.000	ENSTSYG00000013924	RPF2	90	76.000	Carlito_syrichta
ENSODEG00000003531	-	100	72.157	ENSCAPG00000014257	RPF2	88	70.588	Cavia_aperea
ENSODEG00000003531	-	100	80.000	ENSCPOG00000006797	RPF2	96	78.682	Cavia_porcellus
ENSODEG00000003531	-	99	63.774	ENSCCAG00000028553	-	88	61.654	Cebus_capucinus
ENSODEG00000003531	-	98	68.582	ENSCCAG00000028906	-	96	69.725	Cebus_capucinus
ENSODEG00000003531	-	100	78.182	ENSCCAG00000030864	-	90	78.182	Cebus_capucinus
ENSODEG00000003531	-	100	77.818	ENSCCAG00000030365	-	90	77.818	Cebus_capucinus
ENSODEG00000003531	-	89	62.753	ENSCATG00000034352	-	78	71.921	Cercocebus_atys
ENSODEG00000003531	-	92	62.162	ENSCATG00000029725	-	83	75.510	Cercocebus_atys
ENSODEG00000003531	-	100	79.636	ENSCLAG00000010393	-	96	78.295	Chinchilla_lanigera
ENSODEG00000003531	-	99	68.100	ENSCLAG00000010874	-	92	66.667	Chinchilla_lanigera
ENSODEG00000003531	-	91	65.948	ENSCLAG00000013252	-	91	65.948	Chinchilla_lanigera
ENSODEG00000003531	-	100	75.273	ENSCHOG00000005865	RPF2	90	75.273	Choloepus_hoffmanni
ENSODEG00000003531	-	100	72.364	ENSCPBG00000006504	RPF2	90	72.364	Chrysemys_picta_bellii
ENSODEG00000003531	-	100	48.000	ENSCING00000008090	-	89	48.000	Ciona_intestinalis
ENSODEG00000003531	-	100	46.931	ENSCSAVG00000010672	-	93	46.931	Ciona_savignyi
ENSODEG00000003531	-	100	78.545	ENSCANG00000030665	RPF2	90	78.545	Colobus_angolensis_palliatus
ENSODEG00000003531	-	100	76.727	ENSCGRG00001007331	-	90	76.727	Cricetulus_griseus_chok1gshd
ENSODEG00000003531	-	100	62.182	ENSCGRG00001005262	-	87	62.182	Cricetulus_griseus_chok1gshd
ENSODEG00000003531	-	100	76.727	ENSCGRG00000006083	Rpf2	96	75.194	Cricetulus_griseus_crigri
ENSODEG00000003531	-	100	62.545	ENSCSEG00000015725	rpf2	91	62.545	Cynoglossus_semilaevis
ENSODEG00000003531	-	100	61.455	ENSCVAG00000001072	rpf2	90	61.818	Cyprinodon_variegatus
ENSODEG00000003531	-	100	58.909	ENSDARG00000043960	rpf2	89	58.909	Danio_rerio
ENSODEG00000003531	-	70	80.435	ENSDNOG00000039270	RPF2	89	80.435	Dasypus_novemcinctus
ENSODEG00000003531	-	57	81.720	ENSDORG00000026915	Rpf2	94	81.720	Dipodomys_ordii
ENSODEG00000003531	-	100	37.681	FBgn0038585	Non3	86	38.043	Drosophila_melanogaster
ENSODEG00000003531	-	100	47.273	ENSEBUG00000003640	rpf2	83	47.273	Eptatretus_burgeri
ENSODEG00000003531	-	100	77.941	ENSEASG00005006927	-	90	77.941	Equus_asinus_asinus
ENSODEG00000003531	-	53	79.259	ENSEASG00005002363	-	87	79.259	Equus_asinus_asinus
ENSODEG00000003531	-	100	78.309	ENSECAG00000017121	RPF2	90	78.309	Equus_caballus
ENSODEG00000003531	-	82	85.161	ENSEEUG00000006169	RPF2	74	85.161	Erinaceus_europaeus
ENSODEG00000003531	-	100	60.727	ENSELUG00000018518	rpf2	90	60.727	Esox_lucius
ENSODEG00000003531	-	100	77.455	ENSFCAG00000001527	RPF2	90	77.455	Felis_catus
ENSODEG00000003531	-	100	73.818	ENSFALG00000010816	RPF2	90	73.818	Ficedula_albicollis
ENSODEG00000003531	-	94	70.612	ENSFDAG00000016721	-	96	70.612	Fukomys_damarensis
ENSODEG00000003531	-	100	79.636	ENSFDAG00000005811	-	96	77.907	Fukomys_damarensis
ENSODEG00000003531	-	100	63.636	ENSFHEG00000011243	rpf2	89	63.636	Fundulus_heteroclitus
ENSODEG00000003531	-	100	53.430	ENSGMOG00000002521	rpf2	92	53.430	Gadus_morhua
ENSODEG00000003531	-	100	70.909	ENSGALG00000037087	RPF2	90	70.909	Gallus_gallus
ENSODEG00000003531	-	100	63.333	ENSGAFG00000009537	rpf2	90	63.333	Gambusia_affinis
ENSODEG00000003531	-	100	62.182	ENSGACG00000006507	rpf2	89	62.182	Gasterosteus_aculeatus
ENSODEG00000003531	-	100	72.932	ENSGAGG00000016221	RPF2	89	72.932	Gopherus_agassizii
ENSODEG00000003531	-	100	62.182	ENSGGOG00000001469	RPF2	88	61.091	Gorilla_gorilla
ENSODEG00000003531	-	99	72.993	ENSGGOG00000024187	-	96	72.993	Gorilla_gorilla
ENSODEG00000003531	-	100	62.545	ENSHBUG00000021805	rpf2	89	62.545	Haplochromis_burtoni
ENSODEG00000003531	-	100	73.455	ENSHGLG00000012697	-	95	73.818	Heterocephalus_glaber_female
ENSODEG00000003531	-	100	70.909	ENSHGLG00000012500	-	72	72.000	Heterocephalus_glaber_female
ENSODEG00000003531	-	100	78.545	ENSHGLG00000001322	RPF2	96	77.132	Heterocephalus_glaber_female
ENSODEG00000003531	-	100	73.455	ENSHGLG00100000462	-	95	73.818	Heterocephalus_glaber_male
ENSODEG00000003531	-	100	71.264	ENSHGLG00100002981	-	96	71.264	Heterocephalus_glaber_male
ENSODEG00000003531	-	74	67.788	ENSHGLG00100009310	-	91	62.948	Heterocephalus_glaber_male
ENSODEG00000003531	-	100	78.545	ENSHGLG00100012131	RPF2	96	77.132	Heterocephalus_glaber_male
ENSODEG00000003531	-	100	70.545	ENSHGLG00100012473	-	88	71.636	Heterocephalus_glaber_male
ENSODEG00000003531	-	100	63.333	ENSHCOG00000000225	rpf2	92	63.333	Hippocampus_comes
ENSODEG00000003531	-	100	53.818	ENSIPUG00000016288	rpf2	89	53.455	Ictalurus_punctatus
ENSODEG00000003531	-	100	59.701	ENSSTOG00000013114	RPF2	95	58.964	Ictidomys_tridecemlineatus
ENSODEG00000003531	-	100	75.940	ENSJJAG00000009092	Rpf2	96	76.744	Jaculus_jaculus
ENSODEG00000003531	-	100	63.636	ENSKMAG00000014609	rpf2	90	63.636	Kryptolebias_marmoratus
ENSODEG00000003531	-	100	62.909	ENSLBEG00000011907	rpf2	88	61.303	Labrus_bergylta
ENSODEG00000003531	-	100	65.108	ENSLACG00000003942	RPF2	89	65.108	Latimeria_chalumnae
ENSODEG00000003531	-	100	62.230	ENSLOCG00000016992	rpf2	90	62.230	Lepisosteus_oculatus
ENSODEG00000003531	-	100	78.182	ENSLAFG00000018219	RPF2	90	78.182	Loxodonta_africana
ENSODEG00000003531	-	100	78.545	ENSMFAG00000000417	RPF2	88	86.897	Macaca_fascicularis
ENSODEG00000003531	-	92	61.923	ENSMFAG00000036119	-	95	61.923	Macaca_fascicularis
ENSODEG00000003531	-	100	78.545	ENSMMUG00000021532	RPF2	96	75.610	Macaca_mulatta
ENSODEG00000003531	-	99	61.290	ENSMMUG00000042376	-	90	61.290	Macaca_mulatta
ENSODEG00000003531	-	100	62.909	ENSMNEG00000031683	RPF2	88	61.818	Macaca_nemestrina
ENSODEG00000003531	-	99	62.044	ENSMLEG00000042472	-	90	62.044	Mandrillus_leucophaeus
ENSODEG00000003531	-	100	60.727	ENSMAMG00000004267	rpf2	89	60.727	Mastacembelus_armatus
ENSODEG00000003531	-	100	62.545	ENSMZEG00005015632	rpf2	89	62.545	Maylandia_zebra
ENSODEG00000003531	-	100	70.909	ENSMGAG00000013429	RPF2	90	70.909	Meleagris_gallopavo
ENSODEG00000003531	-	89	63.274	ENSMAUG00000005049	Rpf2	98	63.274	Mesocricetus_auratus
ENSODEG00000003531	-	100	67.636	ENSMICG00000038169	-	89	67.636	Microcebus_murinus
ENSODEG00000003531	-	99	65.314	ENSMICG00000028979	-	89	65.314	Microcebus_murinus
ENSODEG00000003531	-	100	77.091	ENSMICG00000032086	-	88	85.517	Microcebus_murinus
ENSODEG00000003531	-	100	77.455	ENSMOCG00000005634	Rpf2	96	75.969	Microtus_ochrogaster
ENSODEG00000003531	-	100	56.727	ENSMMOG00000014844	rpf2	91	56.727	Mola_mola
ENSODEG00000003531	-	100	74.545	ENSMODG00000017919	RPF2	90	74.909	Monodelphis_domestica
ENSODEG00000003531	-	100	61.455	ENSMALG00000019046	rpf2	89	61.455	Monopterus_albus
ENSODEG00000003531	-	100	77.091	MGP_CAROLIEiJ_G0015254	Rpf2	96	75.581	Mus_caroli
ENSODEG00000003531	-	100	76.364	ENSMUSG00000038510	Rpf2	96	74.806	Mus_musculus
ENSODEG00000003531	-	100	76.727	MGP_PahariEiJ_G0030671	Rpf2	96	75.194	Mus_pahari
ENSODEG00000003531	-	100	76.364	MGP_SPRETEiJ_G0016063	Rpf2	96	74.806	Mus_spretus
ENSODEG00000003531	-	100	79.636	ENSMPUG00000010183	RPF2	78	79.636	Mustela_putorius_furo
ENSODEG00000003531	-	86	83.186	ENSMLUG00000005676	RPF2	89	83.186	Myotis_lucifugus
ENSODEG00000003531	-	100	77.091	ENSNGAG00000009701	Rpf2	96	75.581	Nannospalax_galili
ENSODEG00000003531	-	100	61.818	ENSNBRG00000011087	rpf2	89	61.818	Neolamprologus_brichardi
ENSODEG00000003531	-	100	77.091	ENSNLEG00000027819	RPF2	90	77.091	Nomascus_leucogenys
ENSODEG00000003531	-	92	76.078	ENSNLEG00000033597	-	83	76.078	Nomascus_leucogenys
ENSODEG00000003531	-	85	76.695	ENSNLEG00000011848	-	95	75.983	Nomascus_leucogenys
ENSODEG00000003531	-	100	55.839	ENSMEUG00000006421	RPF2	93	55.839	Notamacropus_eugenii
ENSODEG00000003531	-	100	61.455	ENSONIG00000011383	rpf2	89	61.455	Oreochromis_niloticus
ENSODEG00000003531	-	100	78.182	ENSOCUG00000016028	RPF2	90	78.182	Oryctolagus_cuniculus
ENSODEG00000003531	-	100	62.909	ENSORLG00000015183	rpf2	89	62.909	Oryzias_latipes
ENSODEG00000003531	-	100	62.825	ENSORLG00020008756	rpf2	88	62.825	Oryzias_latipes_hni
ENSODEG00000003531	-	100	63.197	ENSORLG00015003841	RPF2	89	62.909	Oryzias_latipes_hsok
ENSODEG00000003531	-	100	64.727	ENSOMEG00000011508	rpf2	89	64.727	Oryzias_melastigma
ENSODEG00000003531	-	100	76.364	ENSOGAG00000007438	RPF2	90	76.364	Otolemur_garnettii
ENSODEG00000003531	-	100	78.909	ENSOARG00000015548	-	90	78.909	Ovis_aries
ENSODEG00000003531	-	100	78.909	ENSOARG00000009886	-	90	78.909	Ovis_aries
ENSODEG00000003531	-	100	78.182	ENSPPAG00000035622	RPF2	90	78.182	Pan_paniscus
ENSODEG00000003531	-	98	71.747	ENSPPAG00000032089	-	96	71.747	Pan_paniscus
ENSODEG00000003531	-	100	77.818	ENSPPRG00000000320	-	90	77.818	Panthera_pardus
ENSODEG00000003531	-	99	65.328	ENSPPRG00000008363	-	90	65.328	Panthera_pardus
ENSODEG00000003531	-	100	77.818	ENSPTIG00000002060	RPF2	90	77.818	Panthera_tigris_altaica
ENSODEG00000003531	-	100	78.182	ENSPTRG00000018503	RPF2	90	78.182	Pan_troglodytes
ENSODEG00000003531	-	100	78.545	ENSPANG00000018834	RPF2	90	78.545	Papio_anubis
ENSODEG00000003531	-	100	61.818	ENSPKIG00000019506	rpf2	90	61.818	Paramormyrops_kingsleyae
ENSODEG00000003531	-	100	71.273	ENSPSIG00000014887	RPF2	90	71.273	Pelodiscus_sinensis
ENSODEG00000003531	-	99	75.194	ENSPEMG00000011413	Rpf2	96	75.194	Peromyscus_maniculatus_bairdii
ENSODEG00000003531	-	100	74.909	ENSPCIG00000028172	RPF2	88	74.909	Phascolarctos_cinereus
ENSODEG00000003531	-	100	63.273	ENSPFOG00000003396	rpf2	90	63.273	Poecilia_formosa
ENSODEG00000003531	-	100	63.636	ENSPLAG00000001226	rpf2	90	63.636	Poecilia_latipinna
ENSODEG00000003531	-	100	63.273	ENSPMEG00000007781	rpf2	90	63.273	Poecilia_mexicana
ENSODEG00000003531	-	100	62.545	ENSPREG00000020525	rpf2	90	62.545	Poecilia_reticulata
ENSODEG00000003531	-	100	78.182	ENSPPYG00000016925	RPF2	90	78.182	Pongo_abelii
ENSODEG00000003531	-	71	80.214	ENSPCAG00000002562	RPF2	73	80.000	Procavia_capensis
ENSODEG00000003531	-	100	68.889	ENSPCOG00000012785	RPF2	89	68.889	Propithecus_coquereli
ENSODEG00000003531	-	86	82.743	ENSPVAG00000003446	RPF2	74	82.743	Pteropus_vampyrus
ENSODEG00000003531	-	100	60.289	ENSPNAG00000000082	rpf2	90	60.289	Pygocentrus_nattereri
ENSODEG00000003531	-	100	76.727	ENSRNOG00000000587	Rpf2	90	76.727	Rattus_norvegicus
ENSODEG00000003531	-	100	76.000	ENSRBIG00000038389	RPF2	88	86.207	Rhinopithecus_bieti
ENSODEG00000003531	-	92	70.155	ENSRROG00000039510	-	95	70.155	Rhinopithecus_roxellana
ENSODEG00000003531	-	86	73.246	ENSRROG00000028992	-	75	73.246	Rhinopithecus_roxellana
ENSODEG00000003531	-	100	78.182	ENSRROG00000036457	RPF2	90	78.182	Rhinopithecus_roxellana
ENSODEG00000003531	-	85	74.790	ENSRROG00000036685	-	87	74.672	Rhinopithecus_roxellana
ENSODEG00000003531	-	99	38.811	YKR081C	-	83	38.947	Saccharomyces_cerevisiae
ENSODEG00000003531	-	87	59.414	ENSSBOG00000030264	-	83	58.590	Saimiri_boliviensis_boliviensis
ENSODEG00000003531	-	94	65.992	ENSSBOG00000034420	-	86	62.753	Saimiri_boliviensis_boliviensis
ENSODEG00000003531	-	100	66.794	ENSSBOG00000025434	-	93	66.031	Saimiri_boliviensis_boliviensis
ENSODEG00000003531	-	87	73.799	ENSSBOG00000022486	-	80	74.336	Saimiri_boliviensis_boliviensis
ENSODEG00000003531	-	83	61.161	ENSSBOG00000029182	-	86	60.455	Saimiri_boliviensis_boliviensis
ENSODEG00000003531	-	100	73.818	ENSSHAG00000002212	RPF2	89	73.818	Sarcophilus_harrisii
ENSODEG00000003531	-	100	62.454	ENSSFOG00015020916	rpf2	90	62.454	Scleropages_formosus
ENSODEG00000003531	-	100	61.091	ENSSMAG00000017499	rpf2	89	61.091	Scophthalmus_maximus
ENSODEG00000003531	-	100	62.030	ENSSDUG00000010383	rpf2	87	62.030	Seriola_dumerili
ENSODEG00000003531	-	100	61.455	ENSSLDG00000022111	rpf2	89	61.455	Seriola_lalandi_dorsalis
ENSODEG00000003531	-	100	52.190	ENSSARG00000012063	RPF2	90	52.190	Sorex_araneus
ENSODEG00000003531	-	100	70.260	ENSSPUG00000005108	RPF2	89	70.260	Sphenodon_punctatus
ENSODEG00000003531	-	100	62.545	ENSSPAG00000008035	rpf2	89	62.545	Stegastes_partitus
ENSODEG00000003531	-	100	78.545	ENSSSCG00000004394	RPF2	90	78.545	Sus_scrofa
ENSODEG00000003531	-	100	72.364	ENSTGUG00000012034	RPF2	90	72.364	Taeniopygia_guttata
ENSODEG00000003531	-	100	61.818	ENSTRUG00000018264	rpf2	89	61.818	Takifugu_rubripes
ENSODEG00000003531	-	100	59.273	ENSTNIG00000002749	rpf2	89	59.273	Tetraodon_nigroviridis
ENSODEG00000003531	-	86	74.779	ENSTBEG00000017151	RPF2	74	74.779	Tupaia_belangeri
ENSODEG00000003531	-	100	77.455	ENSTTRG00000012357	RPF2	90	77.455	Tursiops_truncatus
ENSODEG00000003531	-	100	78.909	ENSUAMG00000013497	RPF2	90	78.909	Ursus_americanus
ENSODEG00000003531	-	100	78.545	ENSUMAG00000025488	RPF2	90	78.545	Ursus_maritimus
ENSODEG00000003531	-	100	77.818	ENSVPAG00000009562	RPF2	90	77.818	Vicugna_pacos
ENSODEG00000003531	-	100	75.862	ENSVVUG00000006593	-	89	75.862	Vulpes_vulpes
ENSODEG00000003531	-	95	75.100	ENSVVUG00000021231	-	92	75.100	Vulpes_vulpes
ENSODEG00000003531	-	100	66.545	ENSXETG00000021335	rpf2	89	66.545	Xenopus_tropicalis
ENSODEG00000003531	-	100	63.333	ENSXCOG00000001590	rpf2	90	63.333	Xiphophorus_couchianus
ENSODEG00000003531	-	100	61.303	ENSXMAG00000021706	rpf2	89	61.303	Xiphophorus_maculatus