EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein CMSS1-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 994 bases
Position: chrJH651577.1:8653382-8654375
Accession: 101580635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004665	CMS1	PF14617.6	2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004753	-	816	XM_004634432	ENSODEP00000004665	271 (aa)	XP_004634489	-

Gene Model

Click here to download ENSODEG00000003558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003558	-	100	79.004	ENSODEG00000001853	-	100	79.004
ENSODEG00000003558	-	100	74.539	ENSODEG00000009446	-	100	74.539
ENSODEG00000003558	-	100	88.256	ENSODEG00000005226	-	100	88.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003558	-	100	81.139	ENSG00000184220	CMSS1	99	87.654	Homo_sapiens
ENSODEG00000003558	-	75	62.376	ENSAPOG00000010604	cmss1	82	62.376	Acanthochromis_polyacanthus
ENSODEG00000003558	-	91	83.658	ENSAMEG00000004092	CMSS1	99	83.658	Ailuropoda_melanoleuca
ENSODEG00000003558	-	75	52.475	ENSACIG00000021854	cmss1	75	52.970	Amphilophus_citrinellus
ENSODEG00000003558	-	100	49.827	ENSAOCG00000013361	cmss1	100	50.173	Amphiprion_ocellaris
ENSODEG00000003558	-	75	62.376	ENSAPEG00000005829	cmss1	100	50.345	Amphiprion_percula
ENSODEG00000003558	-	100	51.903	ENSATEG00000008209	cmss1	100	51.903	Anabas_testudineus
ENSODEG00000003558	-	84	66.812	ENSAPLG00000010542	CMSS1	99	66.812	Anas_platyrhynchos
ENSODEG00000003558	-	84	65.948	ENSACAG00000011065	CMSS1	89	64.050	Anolis_carolinensis
ENSODEG00000003558	-	100	79.787	ENSANAG00000023565	CMSS1	100	79.787	Aotus_nancymaae
ENSODEG00000003558	-	100	48.454	ENSACLG00000027294	cmss1	100	49.141	Astatotilapia_calliptera
ENSODEG00000003558	-	100	44.558	ENSAMXG00000002046	cmss1	100	46.441	Astyanax_mexicanus
ENSODEG00000003558	-	100	81.139	ENSBTAG00000013663	CMSS1	100	81.139	Bos_taurus
ENSODEG00000003558	-	100	79.787	ENSCJAG00000000610	CMSS1	100	79.787	Callithrix_jacchus
ENSODEG00000003558	-	96	80.297	ENSCAFG00000009230	CMSS1	97	80.297	Canis_familiaris
ENSODEG00000003558	-	91	83.594	ENSCAFG00020009464	-	93	83.594	Canis_lupus_dingo
ENSODEG00000003558	-	86	80.258	ENSCAFG00020024156	-	73	80.258	Canis_lupus_dingo
ENSODEG00000003558	-	96	78.810	ENSCHIG00000013003	CMSS1	98	78.519	Capra_hircus
ENSODEG00000003558	-	97	76.557	ENSTSYG00000009266	CMSS1	90	85.837	Carlito_syrichta
ENSODEG00000003558	-	82	73.214	ENSCAPG00000013584	CMSS1	100	73.214	Cavia_aperea
ENSODEG00000003558	-	100	83.630	ENSCPOG00000014680	CMSS1	100	83.630	Cavia_porcellus
ENSODEG00000003558	-	100	80.851	ENSCCAG00000034685	CMSS1	100	80.851	Cebus_capucinus
ENSODEG00000003558	-	100	80.783	ENSCATG00000031980	CMSS1	100	80.783	Cercocebus_atys
ENSODEG00000003558	-	85	89.610	ENSCLAG00000011241	CMSS1	99	89.610	Chinchilla_lanigera
ENSODEG00000003558	-	86	87.124	ENSCSAG00000006024	CMSS1	95	87.124	Chlorocebus_sabaeus
ENSODEG00000003558	-	100	61.566	ENSCHOG00000012098	CMSS1	100	61.566	Choloepus_hoffmanni
ENSODEG00000003558	-	65	41.341	ENSCING00000014848	-	96	41.341	Ciona_intestinalis
ENSODEG00000003558	-	100	80.783	ENSCANG00000031337	CMSS1	100	80.783	Colobus_angolensis_palliatus
ENSODEG00000003558	-	100	74.733	ENSCGRG00001014305	Cmss1	100	74.733	Cricetulus_griseus_chok1gshd
ENSODEG00000003558	-	91	75.097	ENSCGRG00000006722	Cmss1	100	75.097	Cricetulus_griseus_crigri
ENSODEG00000003558	-	75	61.386	ENSCSEG00000004958	cmss1	100	50.000	Cynoglossus_semilaevis
ENSODEG00000003558	-	100	49.310	ENSCVAG00000005039	cmss1	100	49.310	Cyprinodon_variegatus
ENSODEG00000003558	-	100	44.521	ENSDARG00000112579	cmss1	100	45.734	Danio_rerio
ENSODEG00000003558	-	90	81.452	ENSDNOG00000040418	CMSS1	90	81.452	Dasypus_novemcinctus
ENSODEG00000003558	-	100	79.715	ENSDORG00000010461	Cmss1	100	79.715	Dipodomys_ordii
ENSODEG00000003558	-	96	78.788	ENSEASG00005010966	CMSS1	99	86.758	Equus_asinus_asinus
ENSODEG00000003558	-	95	79.554	ENSECAG00000015662	CMSS1	99	86.726	Equus_caballus
ENSODEG00000003558	-	100	53.047	ENSEEUG00000007624	-	100	53.047	Erinaceus_europaeus
ENSODEG00000003558	-	100	49.000	ENSELUG00000019459	cmss1	100	49.000	Esox_lucius
ENSODEG00000003558	-	100	83.986	ENSFCAG00000044577	CMSS1	100	83.986	Felis_catus
ENSODEG00000003558	-	84	64.035	ENSFALG00000005816	CMSS1	96	64.035	Ficedula_albicollis
ENSODEG00000003558	-	84	89.912	ENSFDAG00000012577	CMSS1	100	89.912	Fukomys_damarensis
ENSODEG00000003558	-	84	59.307	ENSFHEG00000012008	cmss1	95	59.307	Fundulus_heteroclitus
ENSODEG00000003558	-	75	59.406	ENSGMOG00000016729	cmss1	100	50.179	Gadus_morhua
ENSODEG00000003558	-	96	60.150	ENSGALG00000015267	CMSS1	98	61.569	Gallus_gallus
ENSODEG00000003558	-	76	60.870	ENSGAFG00000021217	cmss1	77	60.891	Gambusia_affinis
ENSODEG00000003558	-	75	56.931	ENSGACG00000002798	cmss1	100	48.746	Gasterosteus_aculeatus
ENSODEG00000003558	-	91	64.516	ENSGAGG00000019861	CMSS1	96	64.516	Gopherus_agassizii
ENSODEG00000003558	-	91	82.031	ENSGGOG00000014125	CMSS1	98	82.031	Gorilla_gorilla
ENSODEG00000003558	-	100	47.931	ENSHBUG00000008431	cmss1	100	48.276	Haplochromis_burtoni
ENSODEG00000003558	-	90	88.163	ENSHGLG00000019481	CMSS1	100	88.163	Heterocephalus_glaber_female
ENSODEG00000003558	-	91	87.500	ENSHGLG00100010314	CMSS1	99	87.500	Heterocephalus_glaber_male
ENSODEG00000003558	-	100	50.338	ENSHCOG00000003222	cmss1	100	51.007	Hippocampus_comes
ENSODEG00000003558	-	100	46.918	ENSIPUG00000011591	cmss1	100	47.603	Ictalurus_punctatus
ENSODEG00000003558	-	100	80.427	ENSSTOG00000019366	CMSS1	100	80.427	Ictidomys_tridecemlineatus
ENSODEG00000003558	-	100	78.648	ENSJJAG00000014894	Cmss1	100	78.648	Jaculus_jaculus
ENSODEG00000003558	-	75	52.970	ENSKMAG00000002390	cmss1	81	52.970	Kryptolebias_marmoratus
ENSODEG00000003558	-	82	52.083	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSODEG00000003558	-	84	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSODEG00000003558	-	100	50.177	ENSLOCG00000009391	cmss1	100	50.530	Lepisosteus_oculatus
ENSODEG00000003558	-	84	85.526	ENSLAFG00000017509	CMSS1	100	85.526	Loxodonta_africana
ENSODEG00000003558	-	100	81.495	ENSMFAG00000045006	CMSS1	100	81.495	Macaca_fascicularis
ENSODEG00000003558	-	100	81.495	ENSMMUG00000002939	CMSS1	97	87.671	Macaca_mulatta
ENSODEG00000003558	-	100	81.139	ENSMNEG00000031315	CMSS1	100	81.139	Macaca_nemestrina
ENSODEG00000003558	-	100	80.783	ENSMLEG00000033660	CMSS1	100	80.783	Mandrillus_leucophaeus
ENSODEG00000003558	-	100	51.379	ENSMAMG00000017176	cmss1	100	51.724	Mastacembelus_armatus
ENSODEG00000003558	-	100	48.454	ENSMZEG00005021886	cmss1	100	49.141	Maylandia_zebra
ENSODEG00000003558	-	84	66.228	ENSMGAG00000014360	CMSS1	100	66.228	Meleagris_gallopavo
ENSODEG00000003558	-	100	55.477	ENSMAUG00000020609	Cmss1	100	55.477	Mesocricetus_auratus
ENSODEG00000003558	-	100	81.495	ENSMICG00000048977	CMSS1	100	81.495	Microcebus_murinus
ENSODEG00000003558	-	100	76.978	ENSMOCG00000021937	Cmss1	100	76.978	Microtus_ochrogaster
ENSODEG00000003558	-	75	59.901	ENSMMOG00000019794	cmss1	84	59.901	Mola_mola
ENSODEG00000003558	-	87	73.617	ENSMODG00000002275	CMSS1	89	73.617	Monodelphis_domestica
ENSODEG00000003558	-	100	50.859	ENSMALG00000004250	cmss1	100	50.172	Monopterus_albus
ENSODEG00000003558	-	100	77.061	MGP_CAROLIEiJ_G0020824	Cmss1	100	77.061	Mus_caroli
ENSODEG00000003558	-	100	78.136	ENSMUSG00000022748	Cmss1	100	78.136	Mus_musculus
ENSODEG00000003558	-	100	76.703	MGP_PahariEiJ_G0016524	Cmss1	100	76.703	Mus_pahari
ENSODEG00000003558	-	100	78.136	MGP_SPRETEiJ_G0021724	Cmss1	100	78.136	Mus_spretus
ENSODEG00000003558	-	86	89.655	ENSMPUG00000011324	CMSS1	98	84.706	Mustela_putorius_furo
ENSODEG00000003558	-	91	81.008	ENSMLUG00000001131	CMSS1	98	81.008	Myotis_lucifugus
ENSODEG00000003558	-	100	76.868	ENSNGAG00000020316	Cmss1	100	76.868	Nannospalax_galili
ENSODEG00000003558	-	100	48.797	ENSNBRG00000003095	cmss1	100	48.797	Neolamprologus_brichardi
ENSODEG00000003558	-	100	82.206	ENSNLEG00000034172	CMSS1	100	82.206	Nomascus_leucogenys
ENSODEG00000003558	-	84	64.035	ENSMEUG00000014505	CMSS1	100	64.035	Notamacropus_eugenii
ENSODEG00000003558	-	100	81.139	ENSOPRG00000002986	CMSS1	100	81.139	Ochotona_princeps
ENSODEG00000003558	-	75	58.911	ENSONIG00000006678	cmss1	77	58.911	Oreochromis_niloticus
ENSODEG00000003558	-	88	69.874	ENSOANG00000007529	CMSS1	99	71.983	Ornithorhynchus_anatinus
ENSODEG00000003558	-	96	77.778	ENSOCUG00000025366	CMSS1	98	77.778	Oryctolagus_cuniculus
ENSODEG00000003558	-	100	53.472	ENSORLG00000020340	cmss1	100	52.055	Oryzias_latipes
ENSODEG00000003558	-	84	54.386	ENSORLG00020012235	cmss1	85	57.426	Oryzias_latipes_hni
ENSODEG00000003558	-	75	56.436	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSODEG00000003558	-	100	51.557	ENSOMEG00000012555	cmss1	100	53.979	Oryzias_melastigma
ENSODEG00000003558	-	84	86.842	ENSOGAG00000002045	CMSS1	100	86.842	Otolemur_garnettii
ENSODEG00000003558	-	91	82.490	ENSOARG00000017899	CMSS1	88	82.490	Ovis_aries
ENSODEG00000003558	-	91	81.641	ENSPPAG00000038515	CMSS1	94	81.641	Pan_paniscus
ENSODEG00000003558	-	100	84.342	ENSPPRG00000016767	CMSS1	100	84.342	Panthera_pardus
ENSODEG00000003558	-	100	83.986	ENSPTIG00000018274	CMSS1	100	83.986	Panthera_tigris_altaica
ENSODEG00000003558	-	100	80.783	ENSPTRG00000015157	CMSS1	97	86.076	Pan_troglodytes
ENSODEG00000003558	-	91	83.806	ENSPANG00000019980	CMSS1	98	83.806	Papio_anubis
ENSODEG00000003558	-	91	56.538	ENSPKIG00000012609	cmss1	97	56.757	Paramormyrops_kingsleyae
ENSODEG00000003558	-	84	69.298	ENSPSIG00000003849	CMSS1	99	69.298	Pelodiscus_sinensis
ENSODEG00000003558	-	75	59.606	ENSPMGG00000010286	cmss1	87	59.606	Periophthalmus_magnuspinnatus
ENSODEG00000003558	-	100	77.305	ENSPEMG00000016384	Cmss1	100	77.305	Peromyscus_maniculatus_bairdii
ENSODEG00000003558	-	75	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSODEG00000003558	-	86	72.650	ENSPCIG00000015656	CMSS1	89	72.650	Phascolarctos_cinereus
ENSODEG00000003558	-	75	61.386	ENSPFOG00000016849	cmss1	100	51.389	Poecilia_formosa
ENSODEG00000003558	-	75	60.891	ENSPLAG00000008323	cmss1	100	51.042	Poecilia_latipinna
ENSODEG00000003558	-	75	61.386	ENSPMEG00000021020	cmss1	100	51.736	Poecilia_mexicana
ENSODEG00000003558	-	84	58.009	ENSPREG00000007618	cmss1	90	53.759	Poecilia_reticulata
ENSODEG00000003558	-	100	80.783	ENSPPYG00000013606	CMSS1	100	80.783	Pongo_abelii
ENSODEG00000003558	-	100	81.851	ENSPCOG00000020035	CMSS1	100	81.851	Propithecus_coquereli
ENSODEG00000003558	-	100	70.107	ENSPVAG00000017031	CMSS1	100	70.107	Pteropus_vampyrus
ENSODEG00000003558	-	90	49.057	ENSPNYG00000013428	cmss1	97	49.811	Pundamilia_nyererei
ENSODEG00000003558	-	100	47.138	ENSPNAG00000007912	cmss1	100	46.801	Pygocentrus_nattereri
ENSODEG00000003558	-	91	76.772	ENSRNOG00000027888	Cmss1	99	76.772	Rattus_norvegicus
ENSODEG00000003558	-	100	81.139	ENSRBIG00000037931	CMSS1	100	81.139	Rhinopithecus_bieti
ENSODEG00000003558	-	100	81.139	ENSRROG00000042910	CMSS1	100	81.139	Rhinopithecus_roxellana
ENSODEG00000003558	-	91	80.156	ENSSBOG00000030980	CMSS1	98	80.156	Saimiri_boliviensis_boliviensis
ENSODEG00000003558	-	86	72.961	ENSSHAG00000009321	CMSS1	92	72.961	Sarcophilus_harrisii
ENSODEG00000003558	-	100	51.034	ENSSFOG00015001509	cmss1	100	51.379	Scleropages_formosus
ENSODEG00000003558	-	100	50.172	ENSSMAG00000001653	cmss1	100	49.669	Scophthalmus_maximus
ENSODEG00000003558	-	100	50.694	ENSSDUG00000007719	cmss1	100	51.736	Seriola_dumerili
ENSODEG00000003558	-	76	62.319	ENSSLDG00000012300	cmss1	75	58.333	Seriola_lalandi_dorsalis
ENSODEG00000003558	-	100	67.021	ENSSARG00000003584	CMSS1	100	67.021	Sorex_araneus
ENSODEG00000003558	-	83	68.584	ENSSPUG00000003865	CMSS1	100	68.584	Sphenodon_punctatus
ENSODEG00000003558	-	76	61.650	ENSSPAG00000019182	cmss1	63	61.881	Stegastes_partitus
ENSODEG00000003558	-	100	82.206	ENSSSCG00000011970	CMSS1	100	82.206	Sus_scrofa
ENSODEG00000003558	-	84	64.912	ENSTGUG00000013635	CMSS1	99	64.912	Taeniopygia_guttata
ENSODEG00000003558	-	100	47.297	ENSTRUG00000015265	cmss1	100	49.296	Takifugu_rubripes
ENSODEG00000003558	-	75	52.475	ENSTNIG00000002880	cmss1	73	52.475	Tetraodon_nigroviridis
ENSODEG00000003558	-	100	58.214	ENSTBEG00000016722	CMSS1	100	58.214	Tupaia_belangeri
ENSODEG00000003558	-	100	79.359	ENSTTRG00000001562	CMSS1	100	79.359	Tursiops_truncatus
ENSODEG00000003558	-	97	80.882	ENSUAMG00000024209	CMSS1	100	91.031	Ursus_americanus
ENSODEG00000003558	-	97	80.586	ENSUMAG00000001983	CMSS1	99	84.766	Ursus_maritimus
ENSODEG00000003558	-	100	65.591	ENSVPAG00000000263	CMSS1	100	65.591	Vicugna_pacos
ENSODEG00000003558	-	86	87.554	ENSVVUG00000021647	-	95	87.554	Vulpes_vulpes
ENSODEG00000003558	-	83	86.283	ENSVVUG00000007776	-	89	86.283	Vulpes_vulpes
ENSODEG00000003558	-	100	53.147	ENSXETG00000011858	cmss1	100	53.147	Xenopus_tropicalis
ENSODEG00000003558	-	77	60.096	ENSXCOG00000018724	cmss1	69	60.396	Xiphophorus_couchianus
ENSODEG00000003558	-	77	60.096	ENSXMAG00000011243	cmss1	76	60.396	Xiphophorus_maculatus