EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003625 (Gene tree)
Gene ID: 101583283
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 33812 bases
Position: chrJH651602.1:8373957-8407768
Accession: 101583283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004773	CPL	PF08144.11	3.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004861	-	2081	XM_004637181	ENSODEP00000004773	648 (aa)	XP_004637238	UPI0003341389

Gene Model

Click here to download ENSODEG00000003625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003625	-	99	92.923	ENSODEG00000016477	-	100	92.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003625	-	99	90.108	ENSG00000080608	PUM3	99	90.108	Homo_sapiens
ENSODEG00000003625	-	82	61.308	ENSAPOG00000020252	pum3	81	61.290	Acanthochromis_polyacanthus
ENSODEG00000003625	-	99	89.335	ENSAMEG00000012187	PUM3	100	89.335	Ailuropoda_melanoleuca
ENSODEG00000003625	-	86	56.328	ENSACIG00000009786	pum3	88	57.467	Amphilophus_citrinellus
ENSODEG00000003625	-	82	62.056	ENSAOCG00000004439	pum3	81	62.049	Amphiprion_ocellaris
ENSODEG00000003625	-	82	62.056	ENSAPEG00000020523	pum3	81	62.049	Amphiprion_percula
ENSODEG00000003625	-	82	63.364	ENSATEG00000005799	pum3	82	63.378	Anabas_testudineus
ENSODEG00000003625	-	96	73.151	ENSAPLG00000002920	PUM3	100	73.151	Anas_platyrhynchos
ENSODEG00000003625	-	93	67.987	ENSACAG00000003174	PUM3	99	69.371	Anolis_carolinensis
ENSODEG00000003625	-	99	90.402	ENSANAG00000024520	PUM3	99	90.402	Aotus_nancymaae
ENSODEG00000003625	-	96	55.846	ENSACLG00000001017	pum3	99	55.692	Astatotilapia_calliptera
ENSODEG00000003625	-	92	65.997	ENSAMXG00000020911	pum3	93	65.997	Astyanax_mexicanus
ENSODEG00000003625	-	99	89.490	ENSBTAG00000013357	PUM3	100	89.490	Bos_taurus
ENSODEG00000003625	-	75	32.794	WBGene00014165	puf-12	64	32.794	Caenorhabditis_elegans
ENSODEG00000003625	-	99	88.390	ENSCJAG00000010917	PUM3	99	88.390	Callithrix_jacchus
ENSODEG00000003625	-	100	88.889	ENSCAFG00000002035	PUM3	100	88.889	Canis_familiaris
ENSODEG00000003625	-	100	88.889	ENSCAFG00020026867	PUM3	100	88.889	Canis_lupus_dingo
ENSODEG00000003625	-	99	88.872	ENSCHIG00000021559	PUM3	100	88.872	Capra_hircus
ENSODEG00000003625	-	99	89.490	ENSTSYG00000007481	PUM3	100	89.490	Carlito_syrichta
ENSODEG00000003625	-	100	88.752	ENSCAPG00000010592	-	100	88.752	Cavia_aperea
ENSODEG00000003625	-	100	90.586	ENSCPOG00000008552	-	100	90.586	Cavia_porcellus
ENSODEG00000003625	-	99	89.009	ENSCCAG00000032650	PUM3	99	89.009	Cebus_capucinus
ENSODEG00000003625	-	99	90.557	ENSCATG00000024880	PUM3	99	90.557	Cercocebus_atys
ENSODEG00000003625	-	100	93.827	ENSCLAG00000011892	PUM3	100	93.827	Chinchilla_lanigera
ENSODEG00000003625	-	99	90.712	ENSCSAG00000008691	PUM3	99	90.712	Chlorocebus_sabaeus
ENSODEG00000003625	-	100	69.444	ENSCHOG00000002535	PUM3	95	69.444	Choloepus_hoffmanni
ENSODEG00000003625	-	99	71.716	ENSCPBG00000025470	PUM3	95	71.716	Chrysemys_picta_bellii
ENSODEG00000003625	-	81	40.768	ENSCING00000024199	-	87	41.344	Ciona_intestinalis
ENSODEG00000003625	-	90	39.933	ENSCSAVG00000006072	-	99	40.952	Ciona_savignyi
ENSODEG00000003625	-	99	90.557	ENSCANG00000006142	PUM3	99	90.557	Colobus_angolensis_palliatus
ENSODEG00000003625	-	100	88.889	ENSCGRG00001016402	Pum3	100	88.889	Cricetulus_griseus_chok1gshd
ENSODEG00000003625	-	100	88.889	ENSCGRG00000010207	Pum3	100	88.889	Cricetulus_griseus_crigri
ENSODEG00000003625	-	89	56.432	ENSCSEG00000001565	pum3	99	55.952	Cynoglossus_semilaevis
ENSODEG00000003625	-	51	52.963	ENSCVAG00000006550	pum3	74	53.309	Cyprinodon_variegatus
ENSODEG00000003625	-	93	67.044	ENSDARG00000087779	pum3	98	66.236	Danio_rerio
ENSODEG00000003625	-	100	77.112	ENSDNOG00000008157	PUM3	70	77.504	Dasypus_novemcinctus
ENSODEG00000003625	-	81	83.871	ENSETEG00000015331	PUM3	81	83.871	Echinops_telfairi
ENSODEG00000003625	-	86	38.938	ENSEBUG00000011586	pum3	75	41.107	Eptatretus_burgeri
ENSODEG00000003625	-	99	90.402	ENSEASG00005010350	PUM3	99	90.402	Equus_asinus_asinus
ENSODEG00000003625	-	99	90.557	ENSECAG00000017193	PUM3	99	90.557	Equus_caballus
ENSODEG00000003625	-	93	80.265	ENSEEUG00000010314	PUM3	100	80.265	Erinaceus_europaeus
ENSODEG00000003625	-	95	62.921	ENSELUG00000002215	pum3	96	62.921	Esox_lucius
ENSODEG00000003625	-	99	71.166	ENSFALG00000010509	PUM3	100	71.166	Ficedula_albicollis
ENSODEG00000003625	-	100	93.210	ENSFDAG00000021027	PUM3	100	93.210	Fukomys_damarensis
ENSODEG00000003625	-	88	60.209	ENSFHEG00000015576	pum3	99	60.209	Fundulus_heteroclitus
ENSODEG00000003625	-	83	61.940	ENSGMOG00000014217	pum3	97	61.950	Gadus_morhua
ENSODEG00000003625	-	95	73.779	ENSGALG00000010178	PUM3	100	71.275	Gallus_gallus
ENSODEG00000003625	-	55	61.326	ENSGAFG00000001930	pum3	62	61.326	Gambusia_affinis
ENSODEG00000003625	-	82	61.090	ENSGACG00000017878	pum3	96	61.217	Gasterosteus_aculeatus
ENSODEG00000003625	-	99	71.870	ENSGAGG00000018983	PUM3	98	73.226	Gopherus_agassizii
ENSODEG00000003625	-	99	90.402	ENSGGOG00000006143	PUM3	99	90.402	Gorilla_gorilla
ENSODEG00000003625	-	99	50.305	ENSHBUG00000012903	pum3	99	49.618	Haplochromis_burtoni
ENSODEG00000003625	-	100	93.364	ENSHGLG00000015868	-	100	93.364	Heterocephalus_glaber_female
ENSODEG00000003625	-	100	93.364	ENSHGLG00100018825	PUM3	100	93.509	Heterocephalus_glaber_male
ENSODEG00000003625	-	90	58.621	ENSHCOG00000010306	pum3	79	62.619	Hippocampus_comes
ENSODEG00000003625	-	86	68.028	ENSIPUG00000024801	pum3	98	63.301	Ictalurus_punctatus
ENSODEG00000003625	-	99	91.036	ENSSTOG00000009586	PUM3	99	91.036	Ictidomys_tridecemlineatus
ENSODEG00000003625	-	99	86.244	ENSJJAG00000012563	Pum3	99	86.244	Jaculus_jaculus
ENSODEG00000003625	-	86	60.284	ENSKMAG00000010277	pum3	82	62.023	Kryptolebias_marmoratus
ENSODEG00000003625	-	97	56.260	ENSLBEG00000012213	pum3	94	55.210	Labrus_bergylta
ENSODEG00000003625	-	99	64.536	ENSLACG00000008312	PUM3	100	65.297	Latimeria_chalumnae
ENSODEG00000003625	-	92	68.614	ENSLOCG00000012529	pum3	93	68.614	Lepisosteus_oculatus
ENSODEG00000003625	-	100	87.346	ENSLAFG00000017341	PUM3	100	87.346	Loxodonta_africana
ENSODEG00000003625	-	99	90.867	ENSMFAG00000001430	PUM3	99	90.867	Macaca_fascicularis
ENSODEG00000003625	-	99	90.867	ENSMMUG00000002362	PUM3	98	90.867	Macaca_mulatta
ENSODEG00000003625	-	99	90.867	ENSMNEG00000035288	PUM3	99	90.867	Macaca_nemestrina
ENSODEG00000003625	-	99	91.022	ENSMLEG00000034820	PUM3	99	91.022	Mandrillus_leucophaeus
ENSODEG00000003625	-	82	61.985	ENSMAMG00000022861	pum3	81	61.977	Mastacembelus_armatus
ENSODEG00000003625	-	96	55.951	ENSMZEG00005014205	pum3	97	55.864	Maylandia_zebra
ENSODEG00000003625	-	98	65.156	ENSMGAG00000002255	PUM3	99	65.217	Meleagris_gallopavo
ENSODEG00000003625	-	100	88.426	ENSMAUG00000009733	Pum3	100	88.426	Mesocricetus_auratus
ENSODEG00000003625	-	99	90.712	ENSMICG00000045916	PUM3	87	90.712	Microcebus_murinus
ENSODEG00000003625	-	99	84.853	ENSMOCG00000014830	-	100	84.389	Microtus_ochrogaster
ENSODEG00000003625	-	100	88.735	ENSMOCG00000019519	-	100	88.735	Microtus_ochrogaster
ENSODEG00000003625	-	92	53.883	ENSMMOG00000012184	pum3	83	57.685	Mola_mola
ENSODEG00000003625	-	99	73.261	ENSMODG00000015417	PUM3	99	73.261	Monodelphis_domestica
ENSODEG00000003625	-	82	61.308	ENSMALG00000022164	pum3	79	61.670	Monopterus_albus
ENSODEG00000003625	-	100	87.500	MGP_CAROLIEiJ_G0022845	Pum3	100	87.500	Mus_caroli
ENSODEG00000003625	-	100	87.654	ENSMUSG00000041360	Pum3	100	87.654	Mus_musculus
ENSODEG00000003625	-	99	87.944	MGP_PahariEiJ_G0014338	Pum3	99	87.944	Mus_pahari
ENSODEG00000003625	-	100	87.654	MGP_SPRETEiJ_G0023763	Pum3	100	87.654	Mus_spretus
ENSODEG00000003625	-	99	86.708	ENSMPUG00000005125	PUM3	100	86.708	Mustela_putorius_furo
ENSODEG00000003625	-	99	88.545	ENSMLUG00000002309	PUM3	99	88.545	Myotis_lucifugus
ENSODEG00000003625	-	99	85.824	ENSNGAG00000019468	Pum3	100	85.824	Nannospalax_galili
ENSODEG00000003625	-	93	55.246	ENSNBRG00000021370	pum3	95	54.530	Neolamprologus_brichardi
ENSODEG00000003625	-	99	90.248	ENSNLEG00000008712	PUM3	99	90.248	Nomascus_leucogenys
ENSODEG00000003625	-	75	59.138	ENSMEUG00000013606	-	96	57.438	Notamacropus_eugenii
ENSODEG00000003625	-	79	76.759	ENSOPRG00000004225	-	79	76.759	Ochotona_princeps
ENSODEG00000003625	-	96	55.300	ENSONIG00000012733	pum3	81	61.860	Oreochromis_niloticus
ENSODEG00000003625	-	81	77.883	ENSOANG00000014995	PUM3	97	77.883	Ornithorhynchus_anatinus
ENSODEG00000003625	-	99	88.199	ENSOCUG00000026104	-	100	88.199	Oryctolagus_cuniculus
ENSODEG00000003625	-	99	89.181	ENSOCUG00000004189	-	100	89.181	Oryctolagus_cuniculus
ENSODEG00000003625	-	94	54.010	ENSORLG00000014935	pum3	99	51.506	Oryzias_latipes
ENSODEG00000003625	-	94	54.010	ENSORLG00020002841	pum3	99	53.406	Oryzias_latipes_hni
ENSODEG00000003625	-	99	51.745	ENSORLG00015015906	pum3	96	55.135	Oryzias_latipes_hsok
ENSODEG00000003625	-	94	54.337	ENSOMEG00000009427	pum3	92	53.607	Oryzias_melastigma
ENSODEG00000003625	-	99	89.506	ENSOGAG00000008125	-	100	89.506	Otolemur_garnettii
ENSODEG00000003625	-	99	66.003	ENSOGAG00000033481	-	99	64.625	Otolemur_garnettii
ENSODEG00000003625	-	99	88.444	ENSOARG00000013337	PUM3	100	88.444	Ovis_aries
ENSODEG00000003625	-	99	90.263	ENSPPAG00000041337	PUM3	99	90.263	Pan_paniscus
ENSODEG00000003625	-	99	87.944	ENSPPRG00000000809	PUM3	100	87.944	Panthera_pardus
ENSODEG00000003625	-	99	88.563	ENSPTIG00000021934	PUM3	100	88.563	Panthera_tigris_altaica
ENSODEG00000003625	-	99	90.417	ENSPTRG00000020735	PUM3	99	90.417	Pan_troglodytes
ENSODEG00000003625	-	99	91.176	ENSPANG00000025118	PUM3	100	91.036	Papio_anubis
ENSODEG00000003625	-	99	63.927	ENSPKIG00000022249	pum3	97	65.082	Paramormyrops_kingsleyae
ENSODEG00000003625	-	99	71.716	ENSPSIG00000016272	PUM3	100	71.716	Pelodiscus_sinensis
ENSODEG00000003625	-	76	62.322	ENSPMGG00000021261	pum3	98	62.322	Periophthalmus_magnuspinnatus
ENSODEG00000003625	-	89	87.736	ENSPEMG00000019340	-	100	87.736	Peromyscus_maniculatus_bairdii
ENSODEG00000003625	-	99	72.657	ENSPCIG00000030598	PUM3	97	72.657	Phascolarctos_cinereus
ENSODEG00000003625	-	91	57.095	ENSPFOG00000001719	pum3	98	56.784	Poecilia_formosa
ENSODEG00000003625	-	91	54.864	ENSPLAG00000020010	pum3	98	55.079	Poecilia_latipinna
ENSODEG00000003625	-	95	55.238	ENSPMEG00000017451	pum3	98	55.238	Poecilia_mexicana
ENSODEG00000003625	-	99	90.557	ENSPPYG00000019255	PUM3	99	90.557	Pongo_abelii
ENSODEG00000003625	-	100	76.235	ENSPCAG00000005797	PUM3	95	76.235	Procavia_capensis
ENSODEG00000003625	-	99	90.417	ENSPCOG00000027325	PUM3	100	90.417	Propithecus_coquereli
ENSODEG00000003625	-	100	86.883	ENSPVAG00000016135	PUM3	95	86.883	Pteropus_vampyrus
ENSODEG00000003625	-	96	56.260	ENSPNYG00000016124	pum3	99	56.105	Pundamilia_nyererei
ENSODEG00000003625	-	89	67.069	ENSPNAG00000026524	pum3	92	67.069	Pygocentrus_nattereri
ENSODEG00000003625	-	99	85.471	ENSRNOG00000048356	RGD1308750	100	85.471	Rattus_norvegicus
ENSODEG00000003625	-	99	85.781	ENSRNOG00000012574	Pum3	100	85.781	Rattus_norvegicus
ENSODEG00000003625	-	99	90.402	ENSRBIG00000036924	PUM3	99	90.402	Rhinopithecus_bieti
ENSODEG00000003625	-	99	90.402	ENSRROG00000041089	PUM3	99	90.402	Rhinopithecus_roxellana
ENSODEG00000003625	-	99	90.712	ENSSBOG00000028066	PUM3	99	90.712	Saimiri_boliviensis_boliviensis
ENSODEG00000003625	-	99	79.496	ENSSHAG00000003730	PUM3	100	76.994	Sarcophilus_harrisii
ENSODEG00000003625	-	92	65.781	ENSSFOG00015018778	pum3	96	60.963	Scleropages_formosus
ENSODEG00000003625	-	82	63.089	ENSSMAG00000013236	pum3	81	62.808	Scophthalmus_maximus
ENSODEG00000003625	-	89	59.464	ENSSDUG00000001887	pum3	99	55.178	Seriola_dumerili
ENSODEG00000003625	-	99	55.940	ENSSLDG00000015766	pum3	99	55.789	Seriola_lalandi_dorsalis
ENSODEG00000003625	-	96	86.268	ENSSARG00000000579	PUM3	100	86.268	Sorex_araneus
ENSODEG00000003625	-	97	70.794	ENSSPUG00000001707	PUM3	100	69.892	Sphenodon_punctatus
ENSODEG00000003625	-	82	61.308	ENSSPAG00000003976	pum3	82	61.290	Stegastes_partitus
ENSODEG00000003625	-	100	89.352	ENSSSCG00000005227	PUM3	100	89.352	Sus_scrofa
ENSODEG00000003625	-	99	70.788	ENSTGUG00000005339	PUM3	100	70.788	Taeniopygia_guttata
ENSODEG00000003625	-	95	55.842	ENSTRUG00000004074	pum3	79	63.671	Takifugu_rubripes
ENSODEG00000003625	-	90	60.481	ENSTNIG00000010325	pum3	97	59.669	Tetraodon_nigroviridis
ENSODEG00000003625	-	86	71.275	ENSTBEG00000013058	PUM3	86	71.275	Tupaia_belangeri
ENSODEG00000003625	-	100	81.173	ENSTTRG00000001062	PUM3	96	81.173	Tursiops_truncatus
ENSODEG00000003625	-	100	80.710	ENSUMAG00000018443	PUM3	99	85.389	Ursus_maritimus
ENSODEG00000003625	-	100	89.522	ENSVPAG00000010766	PUM3	99	89.522	Vicugna_pacos
ENSODEG00000003625	-	100	88.889	ENSVVUG00000006527	PUM3	100	88.889	Vulpes_vulpes
ENSODEG00000003625	-	99	58.679	ENSXETG00000011707	pum3	99	58.679	Xenopus_tropicalis
ENSODEG00000003625	-	91	54.591	ENSXCOG00000006725	pum3	87	58.015	Xiphophorus_couchianus
ENSODEG00000003625	-	95	55.008	ENSXMAG00000002926	pum3	82	60.115	Xiphophorus_maculatus