EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003657 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1926 bases
Position: chrJH651659.1:7367259-7369184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004817	KH_1	PF00013.29	4.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004906	-	1572	-	ENSODEP00000004817	523 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003657	-	79	39.757	ENSODEG00000015021	KHSRP	87	37.165
ENSODEG00000003657	-	99	66.667	ENSODEG00000002600	-	100	69.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003657	-	100	66.199	ENSG00000162613	FUBP1	99	66.978	Homo_sapiens
ENSODEG00000003657	-	100	52.632	ENSAPOG00000014845	fubp1	98	54.372	Acanthochromis_polyacanthus
ENSODEG00000003657	-	99	64.060	ENSAMEG00000007372	FUBP1	99	64.812	Ailuropoda_melanoleuca
ENSODEG00000003657	-	99	50.555	ENSACIG00000020024	fubp1	99	51.975	Amphilophus_citrinellus
ENSODEG00000003657	-	99	52.000	ENSAPEG00000012232	fubp1	99	54.221	Amphiprion_percula
ENSODEG00000003657	-	100	53.120	ENSATEG00000018619	fubp1	99	53.858	Anabas_testudineus
ENSODEG00000003657	-	65	68.281	ENSAPLG00000005965	FUBP1	100	65.947	Anas_platyrhynchos
ENSODEG00000003657	-	100	58.065	ENSACAG00000006310	FUBP1	96	58.944	Anolis_carolinensis
ENSODEG00000003657	-	100	51.899	ENSACLG00000006708	fubp1	99	53.519	Astatotilapia_calliptera
ENSODEG00000003657	-	85	56.167	ENSAMXG00000005525	fubp1	98	57.495	Astyanax_mexicanus
ENSODEG00000003657	-	99	66.459	ENSCJAG00000007062	FUBP1	99	67.239	Callithrix_jacchus
ENSODEG00000003657	-	99	66.355	ENSCAFG00000020361	FUBP1	99	67.134	Canis_familiaris
ENSODEG00000003657	-	95	66.110	ENSTSYG00000000148	FUBP1	99	67.276	Carlito_syrichta
ENSODEG00000003657	-	99	66.202	ENSCPOG00000002757	FUBP1	100	67.785	Cavia_porcellus
ENSODEG00000003657	-	99	64.935	ENSCCAG00000036537	FUBP1	99	64.935	Cebus_capucinus
ENSODEG00000003657	-	99	66.199	ENSCATG00000042126	FUBP1	99	66.978	Cercocebus_atys
ENSODEG00000003657	-	99	66.667	ENSCLAG00000005621	FUBP1	100	70.513	Chinchilla_lanigera
ENSODEG00000003657	-	99	66.199	ENSCSAG00000001402	FUBP1	99	66.978	Chlorocebus_sabaeus
ENSODEG00000003657	-	99	66.199	ENSCHOG00000008177	FUBP1	98	66.978	Choloepus_hoffmanni
ENSODEG00000003657	-	100	66.719	ENSCGRG00001007103	Fubp1	99	67.500	Cricetulus_griseus_chok1gshd
ENSODEG00000003657	-	94	66.446	ENSCGRG00000003372	Fubp1	98	69.178	Cricetulus_griseus_crigri
ENSODEG00000003657	-	99	51.111	ENSCSEG00000021412	fubp1	99	52.574	Cynoglossus_semilaevis
ENSODEG00000003657	-	100	50.531	ENSCVAG00000014487	fubp1	99	51.891	Cyprinodon_variegatus
ENSODEG00000003657	-	71	54.204	ENSDARG00000029248	fubp1	98	52.025	Danio_rerio
ENSODEG00000003657	-	73	44.921	ENSDNOG00000034565	-	67	45.349	Dasypus_novemcinctus
ENSODEG00000003657	-	99	66.044	ENSDORG00000016534	Fubp1	98	66.822	Dipodomys_ordii
ENSODEG00000003657	-	56	69.298	ENSETEG00000000948	-	53	69.298	Echinops_telfairi
ENSODEG00000003657	-	61	41.176	ENSEBUG00000016143	fubp1	78	37.925	Eptatretus_burgeri
ENSODEG00000003657	-	86	71.809	ENSEEUG00000001287	FUBP1	89	62.828	Erinaceus_europaeus
ENSODEG00000003657	-	99	49.688	ENSELUG00000007990	fubp1	99	53.594	Esox_lucius
ENSODEG00000003657	-	71	67.184	ENSFALG00000005768	FUBP1	98	65.211	Ficedula_albicollis
ENSODEG00000003657	-	99	66.511	ENSFDAG00000014210	FUBP1	100	69.178	Fukomys_damarensis
ENSODEG00000003657	-	99	51.343	ENSFHEG00000005230	fubp1	99	53.543	Fundulus_heteroclitus
ENSODEG00000003657	-	69	56.010	ENSGMOG00000003370	fubp1	99	50.784	Gadus_morhua
ENSODEG00000003657	-	71	66.372	ENSGALG00000008939	FUBP1	99	65.367	Gallus_gallus
ENSODEG00000003657	-	99	50.466	ENSGAFG00000020972	fubp1	99	52.632	Gambusia_affinis
ENSODEG00000003657	-	99	51.558	ENSGACG00000016563	fubp1	99	52.795	Gasterosteus_aculeatus
ENSODEG00000003657	-	100	50.381	ENSHBUG00000009835	fubp1	99	56.069	Haplochromis_burtoni
ENSODEG00000003657	-	99	66.202	ENSHGLG00000008415	-	100	70.513	Heterocephalus_glaber_female
ENSODEG00000003657	-	73	65.284	ENSHGLG00000002808	-	99	61.224	Heterocephalus_glaber_female
ENSODEG00000003657	-	99	66.202	ENSHGLG00100003417	-	99	66.977	Heterocephalus_glaber_male
ENSODEG00000003657	-	73	65.939	ENSHGLG00100001414	-	99	62.166	Heterocephalus_glaber_male
ENSODEG00000003657	-	99	50.232	ENSHCOG00000000910	fubp1	99	52.542	Hippocampus_comes
ENSODEG00000003657	-	99	53.481	ENSIPUG00000009896	fubp1	99	54.589	Ictalurus_punctatus
ENSODEG00000003657	-	100	66.511	ENSSTOG00000014312	FUBP1	100	67.290	Ictidomys_tridecemlineatus
ENSODEG00000003657	-	99	66.139	ENSJJAG00000020069	Fubp1	100	69.178	Jaculus_jaculus
ENSODEG00000003657	-	100	50.755	ENSKMAG00000018897	fubp1	99	53.071	Kryptolebias_marmoratus
ENSODEG00000003657	-	100	48.669	ENSLBEG00000012700	fubp1	97	50.847	Labrus_bergylta
ENSODEG00000003657	-	98	49.850	ENSLOCG00000003745	fubp1	99	53.314	Lepisosteus_oculatus
ENSODEG00000003657	-	99	64.599	ENSLAFG00000003273	FUBP1	99	68.174	Loxodonta_africana
ENSODEG00000003657	-	99	66.303	ENSMFAG00000031825	FUBP1	99	67.083	Macaca_fascicularis
ENSODEG00000003657	-	100	66.199	ENSMMUG00000002899	FUBP1	99	66.978	Macaca_mulatta
ENSODEG00000003657	-	99	66.199	ENSMNEG00000045212	FUBP1	99	66.978	Macaca_nemestrina
ENSODEG00000003657	-	100	50.299	ENSMAMG00000007489	fubp1	99	51.642	Mastacembelus_armatus
ENSODEG00000003657	-	99	51.981	ENSMZEG00005024298	fubp1	99	54.028	Maylandia_zebra
ENSODEG00000003657	-	65	66.908	ENSMGAG00000009424	FUBP1	99	65.506	Meleagris_gallopavo
ENSODEG00000003657	-	99	65.736	ENSMAUG00000016428	Fubp1	98	68.493	Mesocricetus_auratus
ENSODEG00000003657	-	99	66.719	ENSMOCG00000014751	Fubp1	100	68.456	Microtus_ochrogaster
ENSODEG00000003657	-	88	52.737	ENSMMOG00000019463	fubp1	98	54.364	Mola_mola
ENSODEG00000003657	-	97	61.490	ENSMODG00000020804	FUBP1	100	62.282	Monodelphis_domestica
ENSODEG00000003657	-	99	49.772	ENSMALG00000015173	fubp1	99	53.312	Monopterus_albus
ENSODEG00000003657	-	100	66.044	MGP_CAROLIEiJ_G0025740	Fubp1	100	70.363	Mus_caroli
ENSODEG00000003657	-	100	65.732	ENSMUSG00000028034	Fubp1	100	70.172	Mus_musculus
ENSODEG00000003657	-	100	66.096	MGP_PahariEiJ_G0027191	Fubp1	99	70.363	Mus_pahari
ENSODEG00000003657	-	100	65.888	MGP_SPRETEiJ_G0026693	Fubp1	100	70.363	Mus_spretus
ENSODEG00000003657	-	71	64.435	ENSMLUG00000014802	FUBP1	99	64.072	Myotis_lucifugus
ENSODEG00000003657	-	99	65.924	ENSNGAG00000014302	Fubp1	98	69.178	Nannospalax_galili
ENSODEG00000003657	-	99	51.452	ENSNBRG00000015099	fubp1	99	53.519	Neolamprologus_brichardi
ENSODEG00000003657	-	99	63.566	ENSNLEG00000009772	FUBP1	99	64.341	Nomascus_leucogenys
ENSODEG00000003657	-	93	60.930	ENSMEUG00000007917	-	70	62.093	Notamacropus_eugenii
ENSODEG00000003657	-	74	61.159	ENSOPRG00000001175	FUBP1	98	53.052	Ochotona_princeps
ENSODEG00000003657	-	100	50.392	ENSONIG00000018381	fubp1	99	53.678	Oreochromis_niloticus
ENSODEG00000003657	-	71	57.763	ENSORLG00000003540	fubp1	99	53.971	Oryzias_latipes
ENSODEG00000003657	-	99	50.455	ENSORLG00020005908	fubp1	99	53.312	Oryzias_latipes_hni
ENSODEG00000003657	-	99	50.530	ENSORLG00015008779	fubp1	99	54.428	Oryzias_latipes_hsok
ENSODEG00000003657	-	71	56.193	ENSOMEG00000021943	fubp1	99	52.480	Oryzias_melastigma
ENSODEG00000003657	-	99	63.827	ENSOGAG00000014233	FUBP1	99	64.574	Otolemur_garnettii
ENSODEG00000003657	-	99	64.448	ENSOARG00000013259	FUBP1	99	64.902	Ovis_aries
ENSODEG00000003657	-	99	66.355	ENSPPRG00000000413	FUBP1	99	67.134	Panthera_pardus
ENSODEG00000003657	-	99	66.355	ENSPTIG00000019450	FUBP1	99	67.134	Panthera_tigris_altaica
ENSODEG00000003657	-	66	67.780	ENSPSIG00000012965	FUBP1	98	66.781	Pelodiscus_sinensis
ENSODEG00000003657	-	69	57.757	ENSPMGG00000009060	fubp1	98	54.443	Periophthalmus_magnuspinnatus
ENSODEG00000003657	-	99	66.250	ENSPEMG00000021802	Fubp1	100	68.493	Peromyscus_maniculatus_bairdii
ENSODEG00000003657	-	99	50.304	ENSPFOG00000000238	fubp1	99	51.667	Poecilia_formosa
ENSODEG00000003657	-	99	51.278	ENSPLAG00000021170	fubp1	99	52.866	Poecilia_latipinna
ENSODEG00000003657	-	100	52.070	ENSPMEG00000004747	fubp1	100	54.441	Poecilia_mexicana
ENSODEG00000003657	-	100	51.577	ENSPREG00000017911	fubp1	99	54.275	Poecilia_reticulata
ENSODEG00000003657	-	72	68.261	ENSPPYG00000001219	-	69	68.261	Pongo_abelii
ENSODEG00000003657	-	99	66.303	ENSPCAG00000012617	FUBP1	98	67.083	Procavia_capensis
ENSODEG00000003657	-	99	66.355	ENSPCOG00000024974	FUBP1	99	67.134	Propithecus_coquereli
ENSODEG00000003657	-	99	63.963	ENSPVAG00000014637	FUBP1	98	64.743	Pteropus_vampyrus
ENSODEG00000003657	-	99	51.981	ENSPNYG00000004552	fubp1	99	54.028	Pundamilia_nyererei
ENSODEG00000003657	-	98	49.540	ENSPNAG00000016207	fubp1	99	53.528	Pygocentrus_nattereri
ENSODEG00000003657	-	99	66.406	ENSRNOG00000043370	Fubp1	99	67.188	Rattus_norvegicus
ENSODEG00000003657	-	99	66.199	ENSRBIG00000042950	FUBP1	99	66.978	Rhinopithecus_bieti
ENSODEG00000003657	-	99	66.199	ENSRROG00000043534	FUBP1	99	66.978	Rhinopithecus_roxellana
ENSODEG00000003657	-	99	66.355	ENSSBOG00000027299	FUBP1	99	67.134	Saimiri_boliviensis_boliviensis
ENSODEG00000003657	-	94	65.842	ENSSHAG00000005367	FUBP1	99	68.909	Sarcophilus_harrisii
ENSODEG00000003657	-	99	53.071	ENSSFOG00015010213	fubp1	99	55.906	Scleropages_formosus
ENSODEG00000003657	-	94	50.671	ENSSMAG00000012029	fubp1	86	54.027	Scophthalmus_maximus
ENSODEG00000003657	-	100	50.543	ENSSDUG00000007383	fubp1	99	49.920	Seriola_dumerili
ENSODEG00000003657	-	99	51.204	ENSSLDG00000022863	fubp1	99	53.420	Seriola_lalandi_dorsalis
ENSODEG00000003657	-	60	67.025	ENSSARG00000011730	FUBP1	88	67.025	Sorex_araneus
ENSODEG00000003657	-	100	59.877	ENSSPUG00000008389	FUBP1	99	58.754	Sphenodon_punctatus
ENSODEG00000003657	-	100	52.857	ENSSPAG00000010161	fubp1	99	54.114	Stegastes_partitus
ENSODEG00000003657	-	65	67.303	ENSTGUG00000006841	FUBP1	100	65.296	Taeniopygia_guttata
ENSODEG00000003657	-	91	54.352	ENSTRUG00000004615	fubp1	85	55.461	Takifugu_rubripes
ENSODEG00000003657	-	70	70.470	ENSTBEG00000017333	FUBP1	65	70.470	Tupaia_belangeri
ENSODEG00000003657	-	99	66.199	ENSTTRG00000000096	FUBP1	98	66.978	Tursiops_truncatus
ENSODEG00000003657	-	99	66.199	ENSVPAG00000004709	FUBP1	99	66.978	Vicugna_pacos
ENSODEG00000003657	-	99	49.681	ENSXCOG00000019354	fubp1	99	50.637	Xiphophorus_couchianus
ENSODEG00000003657	-	97	52.970	ENSXMAG00000007168	fubp1	100	54.276	Xiphophorus_maculatus