EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 31374 bases
Position: chrJH651740.1:713882-745255
Accession: 101576603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004818	DND1_DSRM	PF14709.7	1.3e-08	1	1
ENSODEP00000004818	G-patch	PF01585.23	2.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004907	-	2510	XM_004645334	ENSODEP00000004818	454 (aa)	XP_012373324	UPI00062A7C00

Gene Model

Click here to download ENSODEG00000003658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003658	-	100	98.928	ENSG00000159140	SON	100	97.797	Homo_sapiens
ENSODEG00000003658	-	69	51.220	ENSACIG00000017870	-	94	64.356	Amphilophus_citrinellus
ENSODEG00000003658	-	72	51.801	ENSATEG00000012732	-	53	51.801	Anabas_testudineus
ENSODEG00000003658	-	93	73.113	ENSAPLG00000008908	-	91	73.113	Anas_platyrhynchos
ENSODEG00000003658	-	99	73.068	ENSACAG00000004681	-	99	72.848	Anolis_carolinensis
ENSODEG00000003658	-	100	100.000	ENSANAG00000035426	SON	100	98.678	Aotus_nancymaae
ENSODEG00000003658	-	78	49.304	ENSACLG00000007098	-	88	51.497	Astatotilapia_calliptera
ENSODEG00000003658	-	100	98.678	ENSCJAG00000046975	SON	100	98.678	Callithrix_jacchus
ENSODEG00000003658	-	100	98.899	ENSCAFG00020025305	SON	100	98.899	Canis_lupus_dingo
ENSODEG00000003658	-	100	99.464	ENSTSYG00000008371	SON	100	98.238	Carlito_syrichta
ENSODEG00000003658	-	100	99.339	ENSCPOG00000024278	SON	100	99.339	Cavia_porcellus
ENSODEG00000003658	-	100	100.000	ENSCCAG00000030234	SON	100	98.678	Cebus_capucinus
ENSODEG00000003658	-	100	100.000	ENSCATG00000029812	SON	100	98.678	Cercocebus_atys
ENSODEG00000003658	-	100	99.559	ENSCLAG00000011776	SON	100	99.559	Chinchilla_lanigera
ENSODEG00000003658	-	81	40.751	ENSCING00000007049	-	85	40.000	Ciona_intestinalis
ENSODEG00000003658	-	100	100.000	ENSCANG00000025986	SON	100	98.678	Colobus_angolensis_palliatus
ENSODEG00000003658	-	100	98.458	ENSCGRG00001016220	Son	100	98.458	Cricetulus_griseus_chok1gshd
ENSODEG00000003658	-	94	98.364	ENSCGRG00000015260	Son	100	98.364	Cricetulus_griseus_crigri
ENSODEG00000003658	-	100	99.559	ENSDORG00000028617	-	100	99.559	Dipodomys_ordii
ENSODEG00000003658	-	72	51.482	ENSELUG00000003878	-	78	59.928	Esox_lucius
ENSODEG00000003658	-	100	98.678	ENSFCAG00000028680	-	100	98.678	Felis_catus
ENSODEG00000003658	-	96	71.005	ENSFALG00000002365	-	91	71.005	Ficedula_albicollis
ENSODEG00000003658	-	100	99.119	ENSFDAG00000019128	SON	100	99.119	Fukomys_damarensis
ENSODEG00000003658	-	98	72.523	ENSGALG00000052354	-	99	72.523	Gallus_gallus
ENSODEG00000003658	-	100	98.678	ENSGGOG00000010481	SON	100	98.678	Gorilla_gorilla
ENSODEG00000003658	-	100	99.780	ENSHGLG00000010432	SON	100	99.780	Heterocephalus_glaber_female
ENSODEG00000003658	-	100	99.339	ENSSTOG00000020593	SON	100	99.339	Ictidomys_tridecemlineatus
ENSODEG00000003658	-	100	99.339	ENSJJAG00000013491	-	100	99.339	Jaculus_jaculus
ENSODEG00000003658	-	98	65.934	ENSLACG00000013385	-	92	65.714	Latimeria_chalumnae
ENSODEG00000003658	-	80	66.027	ENSLOCG00000011021	-	68	65.583	Lepisosteus_oculatus
ENSODEG00000003658	-	100	100.000	ENSMFAG00000034427	SON	100	98.678	Macaca_fascicularis
ENSODEG00000003658	-	100	98.678	ENSMMUG00000005511	SON	100	98.678	Macaca_mulatta
ENSODEG00000003658	-	100	100.000	ENSMNEG00000031671	SON	100	98.678	Macaca_nemestrina
ENSODEG00000003658	-	100	100.000	ENSMLEG00000035039	SON	100	98.678	Mandrillus_leucophaeus
ENSODEG00000003658	-	80	71.351	ENSMGAG00000014526	-	84	71.351	Meleagris_gallopavo
ENSODEG00000003658	-	100	98.678	ENSMAUG00000002086	-	100	98.678	Mesocricetus_auratus
ENSODEG00000003658	-	100	99.732	ENSMICG00000033920	SON	100	98.238	Microcebus_murinus
ENSODEG00000003658	-	100	98.018	ENSMOCG00000012860	-	100	98.018	Microtus_ochrogaster
ENSODEG00000003658	-	75	51.989	ENSMALG00000006263	-	91	53.106	Monopterus_albus
ENSODEG00000003658	-	100	99.464	MGP_CAROLIEiJ_G0020965	Son	100	98.899	Mus_caroli
ENSODEG00000003658	-	100	99.464	ENSMUSG00000022961	Son	100	98.678	Mus_musculus
ENSODEG00000003658	-	100	99.464	MGP_PahariEiJ_G0016670	Son	100	99.119	Mus_pahari
ENSODEG00000003658	-	100	99.464	MGP_SPRETEiJ_G0021871	Son	100	98.678	Mus_spretus
ENSODEG00000003658	-	100	98.678	ENSNGAG00000000062	-	100	98.678	Nannospalax_galili
ENSODEG00000003658	-	100	100.000	ENSNLEG00000004002	SON	100	98.678	Nomascus_leucogenys
ENSODEG00000003658	-	81	56.522	ENSONIG00000003775	-	73	56.522	Oreochromis_niloticus
ENSODEG00000003658	-	90	46.860	ENSORLG00020014016	-	91	46.618	Oryzias_latipes_hni
ENSODEG00000003658	-	94	50.000	ENSORLG00015016415	-	78	50.000	Oryzias_latipes_hsok
ENSODEG00000003658	-	100	98.678	ENSPPAG00000033712	SON	100	98.678	Pan_paniscus
ENSODEG00000003658	-	100	99.732	ENSPPRG00000019353	SON	100	98.678	Panthera_pardus
ENSODEG00000003658	-	100	99.732	ENSPTIG00000017100	SON	100	98.678	Panthera_tigris_altaica
ENSODEG00000003658	-	100	100.000	ENSPTRG00000013872	SON	100	98.678	Pan_troglodytes
ENSODEG00000003658	-	100	98.678	ENSPTRG00000052356	-	100	100.000	Pan_troglodytes
ENSODEG00000003658	-	100	100.000	ENSPANG00000024077	SON	100	98.678	Papio_anubis
ENSODEG00000003658	-	96	73.077	ENSPSIG00000008097	-	91	72.851	Pelodiscus_sinensis
ENSODEG00000003658	-	80	55.495	ENSPMGG00000015598	-	93	51.807	Periophthalmus_magnuspinnatus
ENSODEG00000003658	-	100	96.916	ENSPCIG00000012884	-	100	96.916	Phascolarctos_cinereus
ENSODEG00000003658	-	100	99.732	ENSPCOG00000015502	SON	100	98.238	Propithecus_coquereli
ENSODEG00000003658	-	100	98.678	ENSRBIG00000044269	-	100	100.000	Rhinopithecus_bieti
ENSODEG00000003658	-	100	100.000	ENSRROG00000042156	SON	100	98.678	Rhinopithecus_roxellana
ENSODEG00000003658	-	100	100.000	ENSSBOG00000020885	SON	100	98.678	Saimiri_boliviensis_boliviensis
ENSODEG00000003658	-	100	90.885	ENSSHAG00000008266	SON	63	89.863	Sarcophilus_harrisii
ENSODEG00000003658	-	95	69.565	ENSTGUG00000000486	-	91	69.565	Taeniopygia_guttata
ENSODEG00000003658	-	98	52.980	ENSTNIG00000014468	-	98	52.980	Tetraodon_nigroviridis
ENSODEG00000003658	-	80	71.739	ENSXETG00000014115	son	83	70.380	Xenopus_tropicalis