EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003685 (Gene tree)
Gene ID: 101580436
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 14080 bases
Position: chrJH651688.1:3100471-3114550
Accession: 101580436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	1	6
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	2	6
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	3	6
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	4	6
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	5	6
ENSODEP00000004858	zf-C2H2	PF00096.26	3.7e-34	6	6
ENSODEP00000004858	zf-met	PF12874.7	7.7e-25	1	5
ENSODEP00000004858	zf-met	PF12874.7	7.7e-25	2	5
ENSODEP00000004858	zf-met	PF12874.7	7.7e-25	3	5
ENSODEP00000004858	zf-met	PF12874.7	7.7e-25	4	5
ENSODEP00000004858	zf-met	PF12874.7	7.7e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000004947	SALL1-201	4106	XM_004643396	ENSODEP00000004858	1313 (aa)	XP_004643453	UPI000333B847

Gene Model

Click here to download ENSODEG00000003685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003685	SALL1	56	31.707	ENSODEG00000002735	ZFP62	83	46.809
ENSODEG00000003685	SALL1	56	44.643	ENSODEG00000016460	-	81	44.898
ENSODEG00000003685	SALL1	99	51.739	ENSODEG00000002692	SALL3	99	52.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003685	SALL1	100	94.411	ENSG00000103449	SALL1	100	94.637	Homo_sapiens
ENSODEG00000003685	SALL1	100	68.539	ENSAPOG00000022764	sall1a	99	68.516	Acanthochromis_polyacanthus
ENSODEG00000003685	SALL1	100	92.542	ENSAMEG00000006817	SALL1	100	92.846	Ailuropoda_melanoleuca
ENSODEG00000003685	SALL1	100	67.590	ENSACIG00000004231	sall1a	99	67.466	Amphilophus_citrinellus
ENSODEG00000003685	SALL1	100	68.464	ENSAOCG00000002800	sall1a	99	68.441	Amphiprion_ocellaris
ENSODEG00000003685	SALL1	100	68.464	ENSAPEG00000010179	sall1a	99	68.441	Amphiprion_percula
ENSODEG00000003685	SALL1	100	67.889	ENSATEG00000003006	sall1a	100	67.715	Anabas_testudineus
ENSODEG00000003685	SALL1	100	87.433	ENSAPLG00000003356	SALL1	99	87.652	Anas_platyrhynchos
ENSODEG00000003685	SALL1	99	82.809	ENSACAG00000014399	SALL1	96	82.565	Anolis_carolinensis
ENSODEG00000003685	SALL1	100	94.175	ENSANAG00000027238	SALL1	100	94.478	Aotus_nancymaae
ENSODEG00000003685	SALL1	100	67.766	ENSACLG00000017148	sall1a	99	67.643	Astatotilapia_calliptera
ENSODEG00000003685	SALL1	99	51.967	ENSAMXG00000017702	sall1b	99	51.515	Astyanax_mexicanus
ENSODEG00000003685	SALL1	100	69.283	ENSAMXG00000018599	sall1a	99	68.811	Astyanax_mexicanus
ENSODEG00000003685	SALL1	100	91.717	ENSBTAG00000008544	SALL1	100	92.097	Bos_taurus
ENSODEG00000003685	SALL1	100	94.327	ENSCJAG00000001740	SALL1	100	94.554	Callithrix_jacchus
ENSODEG00000003685	SALL1	100	91.918	ENSCAFG00000009755	SALL1	100	92.372	Canis_familiaris
ENSODEG00000003685	SALL1	100	91.918	ENSCAFG00020002842	SALL1	100	92.372	Canis_lupus_dingo
ENSODEG00000003685	SALL1	100	91.572	ENSCHIG00000026074	SALL1	100	91.572	Capra_hircus
ENSODEG00000003685	SALL1	100	94.829	ENSTSYG00000029464	SALL1	100	94.525	Carlito_syrichta
ENSODEG00000003685	SALL1	98	97.436	ENSCPOG00000006564	SALL1	100	97.436	Cavia_porcellus
ENSODEG00000003685	SALL1	100	92.273	ENSCCAG00000001639	SALL1	100	92.273	Cebus_capucinus
ENSODEG00000003685	SALL1	100	94.996	ENSCATG00000004982	SALL1	100	95.224	Cercocebus_atys
ENSODEG00000003685	SALL1	100	98.020	ENSCLAG00000006380	SALL1	100	98.020	Chinchilla_lanigera
ENSODEG00000003685	SALL1	100	93.414	ENSCSAG00000005319	SALL1	100	93.944	Chlorocebus_sabaeus
ENSODEG00000003685	SALL1	64	94.466	ENSCHOG00000000800	-	69	94.466	Choloepus_hoffmanni
ENSODEG00000003685	SALL1	100	87.738	ENSCPBG00000015924	SALL1	99	88.230	Chrysemys_picta_bellii
ENSODEG00000003685	SALL1	100	94.992	ENSCANG00000036664	SALL1	100	95.372	Colobus_angolensis_palliatus
ENSODEG00000003685	SALL1	100	91.585	ENSCGRG00001023314	-	100	91.585	Cricetulus_griseus_chok1gshd
ENSODEG00000003685	SALL1	98	91.415	ENSCGRG00000009496	Sall1	100	91.415	Cricetulus_griseus_crigri
ENSODEG00000003685	SALL1	100	65.972	ENSCSEG00000009349	sall1a	100	66.518	Cynoglossus_semilaevis
ENSODEG00000003685	SALL1	90	67.003	ENSCVAG00000020513	sall1a	99	66.946	Cyprinodon_variegatus
ENSODEG00000003685	SALL1	100	68.425	ENSDARG00000074319	sall1a	99	68.685	Danio_rerio
ENSODEG00000003685	SALL1	99	47.151	ENSDARG00000075891	sall1b	99	46.812	Danio_rerio
ENSODEG00000003685	SALL1	100	92.243	ENSDNOG00000016413	SALL1	100	93.004	Dasypus_novemcinctus
ENSODEG00000003685	SALL1	98	92.929	ENSETEG00000015150	SALL1	100	92.929	Echinops_telfairi
ENSODEG00000003685	SALL1	99	36.780	ENSEBUG00000008798	SALL1	94	37.992	Eptatretus_burgeri
ENSODEG00000003685	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSODEG00000003685	SALL1	100	94.821	ENSEASG00005014602	SALL1	100	94.821	Equus_asinus_asinus
ENSODEG00000003685	SALL1	91	92.767	ENSECAG00000011334	SALL1	99	92.767	Equus_caballus
ENSODEG00000003685	SALL1	98	91.867	ENSEEUG00000002014	SALL1	100	91.867	Erinaceus_europaeus
ENSODEG00000003685	SALL1	99	52.018	ENSELUG00000017774	-	99	51.129	Esox_lucius
ENSODEG00000003685	SALL1	100	66.028	ENSELUG00000006159	sall1a	99	66.254	Esox_lucius
ENSODEG00000003685	SALL1	100	91.496	ENSFCAG00000024654	SALL1	100	91.721	Felis_catus
ENSODEG00000003685	SALL1	100	86.519	ENSFALG00000000074	SALL1	99	86.585	Ficedula_albicollis
ENSODEG00000003685	SALL1	76	63.462	ENSFHEG00000008424	-	99	61.538	Fundulus_heteroclitus
ENSODEG00000003685	SALL1	100	67.614	ENSFHEG00000012579	sall1a	99	67.240	Fundulus_heteroclitus
ENSODEG00000003685	SALL1	100	66.543	ENSGMOG00000006103	sall1a	99	66.592	Gadus_morhua
ENSODEG00000003685	SALL1	97	41.288	ENSGMOG00000013383	-	90	63.462	Gadus_morhua
ENSODEG00000003685	SALL1	100	87.053	ENSGALG00000039238	SALL1	99	87.119	Gallus_gallus
ENSODEG00000003685	SALL1	100	67.961	ENSGAFG00000009964	sall1a	99	67.812	Gambusia_affinis
ENSODEG00000003685	SALL1	100	66.717	ENSGACG00000016702	sall1a	100	66.867	Gasterosteus_aculeatus
ENSODEG00000003685	SALL1	100	87.281	ENSGAGG00000013979	SALL1	99	87.737	Gopherus_agassizii
ENSODEG00000003685	SALL1	100	94.562	ENSGGOG00000000663	SALL1	100	94.562	Gorilla_gorilla
ENSODEG00000003685	SALL1	100	67.766	ENSHBUG00000022005	sall1a	99	67.643	Haplochromis_burtoni
ENSODEG00000003685	SALL1	100	97.182	ENSHGLG00000004288	-	100	97.182	Heterocephalus_glaber_female
ENSODEG00000003685	SALL1	100	97.182	ENSHGLG00100017496	SALL1	100	97.182	Heterocephalus_glaber_male
ENSODEG00000003685	SALL1	100	66.147	ENSHCOG00000000974	sall1a	99	66.170	Hippocampus_comes
ENSODEG00000003685	SALL1	99	49.037	ENSIPUG00000022928	sall1b	99	48.339	Ictalurus_punctatus
ENSODEG00000003685	SALL1	99	69.767	ENSIPUG00000016265	SALL1	99	69.317	Ictalurus_punctatus
ENSODEG00000003685	SALL1	100	95.057	ENSSTOG00000020885	SALL1	100	94.905	Ictidomys_tridecemlineatus
ENSODEG00000003685	SALL1	100	67.689	ENSKMAG00000016681	sall1a	99	67.715	Kryptolebias_marmoratus
ENSODEG00000003685	SALL1	97	66.615	ENSLBEG00000012207	sall1a	95	66.999	Labrus_bergylta
ENSODEG00000003685	SALL1	97	40.198	ENSLACG00000014018	-	93	40.306	Latimeria_chalumnae
ENSODEG00000003685	SALL1	100	78.218	ENSLACG00000003556	SALL1	99	78.354	Latimeria_chalumnae
ENSODEG00000003685	SALL1	100	73.438	ENSLOCG00000007283	sall1b	99	73.972	Lepisosteus_oculatus
ENSODEG00000003685	SALL1	98	93.245	ENSLAFG00000015251	SALL1	100	93.245	Loxodonta_africana
ENSODEG00000003685	SALL1	100	94.558	ENSMFAG00000003298	SALL1	100	94.936	Macaca_fascicularis
ENSODEG00000003685	SALL1	93	94.454	ENSMMUG00000017200	SALL1	100	94.861	Macaca_mulatta
ENSODEG00000003685	SALL1	93	94.540	ENSMNEG00000034770	SALL1	100	94.540	Macaca_nemestrina
ENSODEG00000003685	SALL1	100	94.992	ENSMLEG00000036406	SALL1	100	95.296	Mandrillus_leucophaeus
ENSODEG00000003685	SALL1	100	68.185	ENSMAMG00000004164	sall1a	100	68.087	Mastacembelus_armatus
ENSODEG00000003685	SALL1	100	67.766	ENSMZEG00005006479	sall1a	99	67.643	Maylandia_zebra
ENSODEG00000003685	SALL1	98	87.189	ENSMGAG00000004704	SALL1	99	87.257	Meleagris_gallopavo
ENSODEG00000003685	SALL1	100	90.951	ENSMAUG00000019093	Sall1	100	91.255	Mesocricetus_auratus
ENSODEG00000003685	SALL1	100	93.308	ENSMICG00000036486	SALL1	100	93.308	Microcebus_murinus
ENSODEG00000003685	SALL1	100	67.416	ENSMMOG00000016400	sall1a	100	67.640	Mola_mola
ENSODEG00000003685	SALL1	100	89.871	ENSMODG00000013114	SALL1	100	90.175	Monodelphis_domestica
ENSODEG00000003685	SALL1	100	68.512	ENSMALG00000013400	sall1a	100	68.165	Monopterus_albus
ENSODEG00000003685	SALL1	100	91.005	MGP_CAROLIEiJ_G0031362	Sall1	100	91.005	Mus_caroli
ENSODEG00000003685	SALL1	100	90.861	ENSMUSG00000031665	Sall1	100	90.861	Mus_musculus
ENSODEG00000003685	SALL1	100	90.717	MGP_PahariEiJ_G0022961	Sall1	100	90.717	Mus_pahari
ENSODEG00000003685	SALL1	100	90.937	MGP_SPRETEiJ_G0032480	Sall1	100	90.937	Mus_spretus
ENSODEG00000003685	SALL1	98	90.085	ENSMPUG00000003265	SALL1	96	90.627	Mustela_putorius_furo
ENSODEG00000003685	SALL1	98	84.142	ENSMLUG00000015541	SALL1	100	85.604	Myotis_lucifugus
ENSODEG00000003685	SALL1	100	67.766	ENSNBRG00000009307	sall1a	99	67.643	Neolamprologus_brichardi
ENSODEG00000003685	SALL1	94	98.889	ENSNLEG00000001008	SALL1	100	98.889	Nomascus_leucogenys
ENSODEG00000003685	SALL1	100	89.642	ENSMEUG00000012206	SALL1	100	89.490	Notamacropus_eugenii
ENSODEG00000003685	SALL1	89	93.419	ENSOPRG00000005645	SALL1	74	93.419	Ochotona_princeps
ENSODEG00000003685	SALL1	100	68.066	ENSONIG00000002831	sall1a	99	67.943	Oreochromis_niloticus
ENSODEG00000003685	SALL1	83	88.679	ENSOANG00000013399	SALL1	97	88.679	Ornithorhynchus_anatinus
ENSODEG00000003685	SALL1	100	67.440	ENSORLG00000013827	sall1a	97	69.744	Oryzias_latipes
ENSODEG00000003685	SALL1	100	67.365	ENSORLG00020020570	sall1a	99	67.292	Oryzias_latipes_hni
ENSODEG00000003685	SALL1	100	67.566	ENSORLG00015018830	sall1a	97	69.329	Oryzias_latipes_hsok
ENSODEG00000003685	SALL1	100	67.438	ENSOMEG00000016043	sall1a	99	67.258	Oryzias_melastigma
ENSODEG00000003685	SALL1	100	93.627	ENSOGAG00000027316	SALL1	100	93.930	Otolemur_garnettii
ENSODEG00000003685	SALL1	100	86.103	ENSOARG00000017583	SALL1	100	85.801	Ovis_aries
ENSODEG00000003685	SALL1	99	93.745	ENSPPAG00000035657	SALL1	100	94.761	Pan_paniscus
ENSODEG00000003685	SALL1	100	70.114	ENSPPAG00000035136	-	100	70.875	Pan_paniscus
ENSODEG00000003685	SALL1	100	91.496	ENSPPRG00000023283	SALL1	100	91.721	Panthera_pardus
ENSODEG00000003685	SALL1	83	95.429	ENSPTIG00000013539	-	96	95.429	Panthera_tigris_altaica
ENSODEG00000003685	SALL1	96	71.813	ENSPTRG00000045256	-	98	72.648	Pan_troglodytes
ENSODEG00000003685	SALL1	100	94.419	ENSPTRG00000008108	SALL1	100	94.928	Pan_troglodytes
ENSODEG00000003685	SALL1	100	95.068	ENSPANG00000024176	SALL1	100	95.372	Papio_anubis
ENSODEG00000003685	SALL1	100	65.234	ENSPKIG00000005383	-	99	65.280	Paramormyrops_kingsleyae
ENSODEG00000003685	SALL1	100	65.766	ENSPKIG00000022251	sall1a	99	65.688	Paramormyrops_kingsleyae
ENSODEG00000003685	SALL1	100	87.129	ENSPSIG00000008582	SALL1	99	87.195	Pelodiscus_sinensis
ENSODEG00000003685	SALL1	100	66.099	ENSPMGG00000021788	sall1a	100	65.803	Periophthalmus_magnuspinnatus
ENSODEG00000003685	SALL1	99	51.871	ENSPMAG00000008148	sall1b	99	52.027	Petromyzon_marinus
ENSODEG00000003685	SALL1	100	90.023	ENSPCIG00000017840	SALL1	100	89.871	Phascolarctos_cinereus
ENSODEG00000003685	SALL1	98	67.784	ENSPFOG00000015799	sall1a	96	67.529	Poecilia_formosa
ENSODEG00000003685	SALL1	100	67.737	ENSPLAG00000022539	sall1a	99	67.487	Poecilia_latipinna
ENSODEG00000003685	SALL1	100	68.036	ENSPMEG00000020894	sall1a	99	67.662	Poecilia_mexicana
ENSODEG00000003685	SALL1	100	67.865	ENSPREG00000006802	sall1a	99	67.416	Poecilia_reticulata
ENSODEG00000003685	SALL1	90	94.223	ENSPPYG00000007345	SALL1	95	94.477	Pongo_abelii
ENSODEG00000003685	SALL1	85	95.062	ENSPCAG00000008162	SALL1	93	95.062	Procavia_capensis
ENSODEG00000003685	SALL1	100	93.764	ENSPCOG00000028192	SALL1	100	93.916	Propithecus_coquereli
ENSODEG00000003685	SALL1	67	91.589	ENSPVAG00000015374	SALL1	100	91.939	Pteropus_vampyrus
ENSODEG00000003685	SALL1	100	67.841	ENSPNYG00000010865	sall1a	99	67.718	Pundamilia_nyererei
ENSODEG00000003685	SALL1	99	54.129	ENSPNAG00000007442	sall1b	99	53.104	Pygocentrus_nattereri
ENSODEG00000003685	SALL1	100	67.341	ENSPNAG00000023644	sall1a	99	66.792	Pygocentrus_nattereri
ENSODEG00000003685	SALL1	98	63.462	ENSPNAG00000028248	-	68	63.462	Pygocentrus_nattereri
ENSODEG00000003685	SALL1	100	90.668	ENSRNOG00000013907	Sall1	100	91.123	Rattus_norvegicus
ENSODEG00000003685	SALL1	93	94.281	ENSRBIG00000015707	SALL1	100	94.935	Rhinopithecus_bieti
ENSODEG00000003685	SALL1	99	93.736	ENSRROG00000035777	SALL1	100	94.857	Rhinopithecus_roxellana
ENSODEG00000003685	SALL1	100	94.180	ENSSBOG00000032186	SALL1	100	94.558	Saimiri_boliviensis_boliviensis
ENSODEG00000003685	SALL1	100	89.033	ENSSHAG00000009477	SALL1	100	89.109	Sarcophilus_harrisii
ENSODEG00000003685	SALL1	99	66.692	ENSSFOG00015020020	sall1a	99	67.218	Scleropages_formosus
ENSODEG00000003685	SALL1	98	67.049	ENSSFOG00015001590	sall1a	99	66.922	Scleropages_formosus
ENSODEG00000003685	SALL1	100	67.964	ENSSMAG00000009160	sall1a	100	68.015	Scophthalmus_maximus
ENSODEG00000003685	SALL1	100	68.488	ENSSDUG00000006507	sall1a	100	68.614	Seriola_dumerili
ENSODEG00000003685	SALL1	90	59.184	ENSSDUG00000000748	sall1b	84	59.184	Seriola_dumerili
ENSODEG00000003685	SALL1	100	68.563	ENSSLDG00000017721	sall1a	100	68.689	Seriola_lalandi_dorsalis
ENSODEG00000003685	SALL1	54	72.340	ENSSLDG00000014465	-	87	72.340	Seriola_lalandi_dorsalis
ENSODEG00000003685	SALL1	98	91.712	ENSSARG00000000661	SALL1	100	91.712	Sorex_araneus
ENSODEG00000003685	SALL1	100	86.596	ENSSPUG00000000156	SALL1	99	86.662	Sphenodon_punctatus
ENSODEG00000003685	SALL1	100	68.736	ENSSPAG00000021615	sall1a	99	68.464	Stegastes_partitus
ENSODEG00000003685	SALL1	100	91.252	ENSSSCG00000002836	SALL1	100	91.327	Sus_scrofa
ENSODEG00000003685	SALL1	100	86.748	ENSTGUG00000007514	SALL1	99	86.814	Taeniopygia_guttata
ENSODEG00000003685	SALL1	91	66.041	ENSTRUG00000008950	sall1a	100	66.639	Takifugu_rubripes
ENSODEG00000003685	SALL1	92	65.118	ENSTNIG00000004257	sall1a	100	65.438	Tetraodon_nigroviridis
ENSODEG00000003685	SALL1	78	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
ENSODEG00000003685	SALL1	90	91.908	ENSUAMG00000023379	-	92	91.993	Ursus_americanus
ENSODEG00000003685	SALL1	90	90.863	ENSVVUG00000019383	-	99	91.201	Vulpes_vulpes
ENSODEG00000003685	SALL1	83	61.538	ENSXETG00000017176	sall2	77	61.538	Xenopus_tropicalis
ENSODEG00000003685	SALL1	100	76.021	ENSXETG00000018417	sall1	99	76.077	Xenopus_tropicalis
ENSODEG00000003685	SALL1	100	67.961	ENSXMAG00000016273	sall1a	99	67.588	Xiphophorus_maculatus