EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003739 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 873 bases
Position: chrJH651602.1:4542059-4542931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004929	RRM_1	PF00076.22	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005019	-	798	-	ENSODEP00000004929	265 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003739	-	59	75.281	ENSODEG00000011555	-	89	74.251
ENSODEG00000003739	-	75	87.783	ENSODEG00000002083	BCL2L2-PABPN1	92	83.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003739	-	63	85.714	ENSG00000258643	BCL2L2-PABPN1	57	85.714	Homo_sapiens
ENSODEG00000003739	-	75	86.425	ENSG00000100836	PABPN1	97	83.871	Homo_sapiens
ENSODEG00000003739	-	88	62.646	ENSAPOG00000016425	pabpn1	86	74.384	Acanthochromis_polyacanthus
ENSODEG00000003739	-	63	85.714	ENSAMEG00000007048	BCL2L2-PABPN1	100	85.714	Ailuropoda_melanoleuca
ENSODEG00000003739	-	86	62.302	ENSACIG00000021744	pabpn1	94	72.121	Amphilophus_citrinellus
ENSODEG00000003739	-	88	62.646	ENSAOCG00000015805	pabpn1	86	74.384	Amphiprion_ocellaris
ENSODEG00000003739	-	88	62.646	ENSAPEG00000009623	pabpn1	86	74.384	Amphiprion_percula
ENSODEG00000003739	-	88	62.646	ENSATEG00000020531	pabpn1	86	74.384	Anabas_testudineus
ENSODEG00000003739	-	68	77.833	ENSACAG00000006185	-	74	77.033	Anolis_carolinensis
ENSODEG00000003739	-	67	86.432	ENSANAG00000024513	-	91	79.487	Aotus_nancymaae
ENSODEG00000003739	-	86	62.055	ENSACLG00000016374	pabpn1	65	74.074	Astatotilapia_calliptera
ENSODEG00000003739	-	88	63.424	ENSAMXG00000000452	pabpn1	94	72.289	Astyanax_mexicanus
ENSODEG00000003739	-	95	69.597	ENSBTAG00000053753	-	71	84.817	Bos_taurus
ENSODEG00000003739	-	75	85.520	ENSBTAG00000006884	PABPN1	92	81.495	Bos_taurus
ENSODEG00000003739	-	66	80.645	ENSBTAG00000050594	-	72	79.897	Bos_taurus
ENSODEG00000003739	-	50	56.849	WBGene00003904	pabp-2	91	49.474	Caenorhabditis_elegans
ENSODEG00000003739	-	75	86.425	ENSCJAG00000007960	-	92	82.206	Callithrix_jacchus
ENSODEG00000003739	-	55	82.036	ENSCJAG00000004407	-	84	82.036	Callithrix_jacchus
ENSODEG00000003739	-	77	85.398	ENSCAFG00000011482	PABPN1	92	82.206	Canis_familiaris
ENSODEG00000003739	-	75	86.425	ENSCAFG00020006651	-	92	82.206	Canis_lupus_dingo
ENSODEG00000003739	-	75	86.425	ENSCAFG00020007298	-	92	82.206	Canis_lupus_dingo
ENSODEG00000003739	-	75	85.973	ENSCHIG00000012184	PABPN1	92	81.851	Capra_hircus
ENSODEG00000003739	-	63	85.714	ENSTSYG00000033996	BCL2L2-PABPN1	94	83.832	Carlito_syrichta
ENSODEG00000003739	-	75	87.783	ENSCPOG00000025574	PABPN1	92	83.986	Cavia_porcellus
ENSODEG00000003739	-	75	86.425	ENSCCAG00000033954	BCL2L2-PABPN1	92	82.206	Cebus_capucinus
ENSODEG00000003739	-	75	86.425	ENSCATG00000038536	BCL2L2-PABPN1	92	82.206	Cercocebus_atys
ENSODEG00000003739	-	69	71.859	ENSCLAG00000012423	PABPN1	91	73.260	Chinchilla_lanigera
ENSODEG00000003739	-	75	84.615	ENSCSAG00000016036	PABPN1	92	80.783	Chlorocebus_sabaeus
ENSODEG00000003739	-	66	75.622	ENSCHOG00000004798	BCL2L2-PABPN1	87	75.622	Choloepus_hoffmanni
ENSODEG00000003739	-	55	80.240	ENSCPBG00000026060	-	94	80.240	Chrysemys_picta_bellii
ENSODEG00000003739	-	67	61.979	ENSCING00000012468	-	84	63.021	Ciona_intestinalis
ENSODEG00000003739	-	59	59.412	ENSCSAVG00000002001	-	93	59.119	Ciona_savignyi
ENSODEG00000003739	-	100	76.370	ENSCANG00000030980	-	74	80.711	Colobus_angolensis_palliatus
ENSODEG00000003739	-	63	85.714	ENSCANG00000009750	BCL2L2-PABPN1	94	83.832	Colobus_angolensis_palliatus
ENSODEG00000003739	-	95	83.032	ENSCGRG00001019696	Pabpn1	94	83.832	Cricetulus_griseus_chok1gshd
ENSODEG00000003739	-	51	89.116	ENSCGRG00000011102	Pabpn1	91	89.116	Cricetulus_griseus_crigri
ENSODEG00000003739	-	69	72.277	ENSCSEG00000008774	pabpn1	89	72.464	Cynoglossus_semilaevis
ENSODEG00000003739	-	87	62.205	ENSCVAG00000003152	pabpn1	86	73.039	Cyprinodon_variegatus
ENSODEG00000003739	-	88	62.162	ENSDARG00000045373	pabpn1	86	74.384	Danio_rerio
ENSODEG00000003739	-	51	56.944	ENSDARG00000087996	pabpn1l	72	62.393	Danio_rerio
ENSODEG00000003739	-	75	86.425	ENSDNOG00000023682	PABPN1	92	82.206	Dasypus_novemcinctus
ENSODEG00000003739	-	75	86.878	ENSDORG00000028966	-	92	82.918	Dipodomys_ordii
ENSODEG00000003739	-	59	69.643	ENSDORG00000023928	-	92	68.153	Dipodomys_ordii
ENSODEG00000003739	-	70	54.369	FBgn0005648	Pabp2	82	58.511	Drosophila_melanogaster
ENSODEG00000003739	-	65	72.021	ENSEBUG00000002322	pabpn1	84	72.021	Eptatretus_burgeri
ENSODEG00000003739	-	75	86.425	ENSEASG00005011716	PABPN1	92	82.206	Equus_asinus_asinus
ENSODEG00000003739	-	74	85.845	ENSECAG00000011652	PABPN1	91	81.413	Equus_caballus
ENSODEG00000003739	-	96	75.704	ENSEEUG00000012973	-	75	82.432	Erinaceus_europaeus
ENSODEG00000003739	-	88	65.370	ENSELUG00000022654	pabpn1	85	75.490	Esox_lucius
ENSODEG00000003739	-	75	86.425	ENSFCAG00000031922	PABPN1	92	82.206	Felis_catus
ENSODEG00000003739	-	59	84.831	ENSFDAG00000018381	BCL2L2-PABPN1	100	84.831	Fukomys_damarensis
ENSODEG00000003739	-	88	62.257	ENSFHEG00000007215	pabpn1	86	72.277	Fundulus_heteroclitus
ENSODEG00000003739	-	66	72.821	ENSGMOG00000003922	pabpn1	66	73.958	Gadus_morhua
ENSODEG00000003739	-	65	79.592	ENSGALG00000052930	-	60	80.583	Gallus_gallus
ENSODEG00000003739	-	88	64.062	ENSGAFG00000017099	pabpn1	86	73.171	Gambusia_affinis
ENSODEG00000003739	-	88	59.779	ENSGACG00000002167	pabpn1	90	68.018	Gasterosteus_aculeatus
ENSODEG00000003739	-	75	86.425	ENSGGOG00000022683	-	92	82.206	Gorilla_gorilla
ENSODEG00000003739	-	96	76.190	ENSGGOG00000025919	-	99	75.093	Gorilla_gorilla
ENSODEG00000003739	-	95	70.189	ENSGGOG00000039675	-	76	76.650	Gorilla_gorilla
ENSODEG00000003739	-	88	63.035	ENSHBUG00000019523	pabpn1	86	74.384	Haplochromis_burtoni
ENSODEG00000003739	-	55	70.440	ENSHGLG00000009842	-	93	70.440	Heterocephalus_glaber_female
ENSODEG00000003739	-	75	87.783	ENSHGLG00000002927	-	92	89.796	Heterocephalus_glaber_female
ENSODEG00000003739	-	94	68.382	ENSHGLG00000018588	-	71	78.000	Heterocephalus_glaber_female
ENSODEG00000003739	-	59	85.393	ENSHGLG00100006673	-	100	85.393	Heterocephalus_glaber_male
ENSODEG00000003739	-	94	67.939	ENSHGLG00100015565	-	72	78.000	Heterocephalus_glaber_male
ENSODEG00000003739	-	55	80.488	ENSHGLG00100018935	-	94	81.098	Heterocephalus_glaber_male
ENSODEG00000003739	-	88	61.905	ENSHCOG00000004655	pabpn1	86	73.399	Hippocampus_comes
ENSODEG00000003739	-	88	63.786	ENSIPUG00000008085	PABPN1	86	74.384	Ictalurus_punctatus
ENSODEG00000003739	-	69	64.840	ENSIPUG00000000180	-	94	68.545	Ictalurus_punctatus
ENSODEG00000003739	-	55	83.832	ENSSTOG00000029847	BCL2L2-PABPN1	94	83.832	Ictidomys_tridecemlineatus
ENSODEG00000003739	-	55	83.832	ENSJJAG00000023507	Gm20521	94	83.832	Jaculus_jaculus
ENSODEG00000003739	-	68	72.727	ENSKMAG00000018748	pabpn1	86	73.039	Kryptolebias_marmoratus
ENSODEG00000003739	-	88	62.646	ENSLBEG00000027266	pabpn1	86	74.384	Labrus_bergylta
ENSODEG00000003739	-	58	76.271	ENSLACG00000000646	pabpn1	83	73.684	Latimeria_chalumnae
ENSODEG00000003739	-	70	61.765	ENSLOCG00000004694	pabpn1l	95	62.189	Lepisosteus_oculatus
ENSODEG00000003739	-	83	64.315	ENSLOCG00000000796	pabpn1	69	74.346	Lepisosteus_oculatus
ENSODEG00000003739	-	63	85.714	ENSMFAG00000032183	BCL2L2-PABPN1	94	83.832	Macaca_fascicularis
ENSODEG00000003739	-	100	72.819	ENSMMUG00000048382	-	68	76.961	Macaca_mulatta
ENSODEG00000003739	-	68	80.788	ENSMMUG00000014747	BCL2L2-PABPN1	97	88.028	Macaca_mulatta
ENSODEG00000003739	-	75	86.425	ENSMNEG00000045065	BCL2L2-PABPN1	92	82.206	Macaca_nemestrina
ENSODEG00000003739	-	100	59.929	ENSMNEG00000035750	-	99	85.106	Macaca_nemestrina
ENSODEG00000003739	-	100	64.437	ENSMLEG00000034623	-	99	84.672	Mandrillus_leucophaeus
ENSODEG00000003739	-	63	85.714	ENSMLEG00000043862	BCL2L2-PABPN1	94	83.832	Mandrillus_leucophaeus
ENSODEG00000003739	-	87	63.525	ENSMAMG00000007979	pabpn1	68	73.500	Mastacembelus_armatus
ENSODEG00000003739	-	83	64.463	ENSMZEG00005011904	pabpn1	66	73.822	Maylandia_zebra
ENSODEG00000003739	-	95	83.032	ENSMAUG00000007383	Gm20521	93	83.755	Mesocricetus_auratus
ENSODEG00000003739	-	95	78.388	ENSMICG00000010002	BCL2L2-PABPN1	92	82.562	Microcebus_murinus
ENSODEG00000003739	-	95	83.032	ENSMOCG00000018557	Gm20521	90	89.116	Microtus_ochrogaster
ENSODEG00000003739	-	88	63.035	ENSMMOG00000005405	pabpn1	86	74.384	Mola_mola
ENSODEG00000003739	-	70	83.173	ENSMODG00000004535	-	91	79.496	Monodelphis_domestica
ENSODEG00000003739	-	88	63.786	ENSMALG00000019612	pabpn1	67	73.500	Monopterus_albus
ENSODEG00000003739	-	95	81.949	MGP_CAROLIEiJ_G0019277	Pabpn1	97	83.019	Mus_caroli
ENSODEG00000003739	-	63	84.127	MGP_CAROLIEiJ_G0019276	Gm20521	57	84.127	Mus_caroli
ENSODEG00000003739	-	63	84.656	ENSMUSG00000092232	Gm20521	57	84.656	Mus_musculus
ENSODEG00000003739	-	95	82.310	ENSMUSG00000022194	Pabpn1	97	83.019	Mus_musculus
ENSODEG00000003739	-	95	82.310	MGP_PahariEiJ_G0030295	Pabpn1	90	94.737	Mus_pahari
ENSODEG00000003739	-	63	84.656	MGP_PahariEiJ_G0030294	Gm20521	57	84.656	Mus_pahari
ENSODEG00000003739	-	95	82.310	MGP_SPRETEiJ_G0020166	Pabpn1	97	83.019	Mus_spretus
ENSODEG00000003739	-	63	84.656	MGP_SPRETEiJ_G0020165	Gm20521	57	84.656	Mus_spretus
ENSODEG00000003739	-	50	82.581	ENSMPUG00000006775	-	92	82.581	Mustela_putorius_furo
ENSODEG00000003739	-	95	73.852	ENSMLUG00000012452	-	70	81.221	Myotis_lucifugus
ENSODEG00000003739	-	98	71.277	ENSMLUG00000028677	-	75	81.951	Myotis_lucifugus
ENSODEG00000003739	-	63	83.598	ENSMLUG00000003800	-	100	83.598	Myotis_lucifugus
ENSODEG00000003739	-	63	85.714	ENSNGAG00000019529	Gm20521	57	85.714	Nannospalax_galili
ENSODEG00000003739	-	83	64.463	ENSNBRG00000023955	pabpn1	94	72.121	Neolamprologus_brichardi
ENSODEG00000003739	-	100	71.429	ENSNLEG00000030598	-	79	83.505	Nomascus_leucogenys
ENSODEG00000003739	-	75	86.425	ENSNLEG00000015007	-	79	86.425	Nomascus_leucogenys
ENSODEG00000003739	-	83	64.463	ENSONIG00000008112	pabpn1	66	73.822	Oreochromis_niloticus
ENSODEG00000003739	-	75	85.520	ENSOCUG00000016174	PABPN1	92	83.032	Oryctolagus_cuniculus
ENSODEG00000003739	-	87	63.821	ENSORLG00000027900	pabpn1	81	73.096	Oryzias_latipes
ENSODEG00000003739	-	66	76.216	ENSORLG00020004681	pabpn1	67	73.500	Oryzias_latipes_hni
ENSODEG00000003739	-	66	76.216	ENSORLG00015000018	pabpn1	86	74.384	Oryzias_latipes_hsok
ENSODEG00000003739	-	70	72.637	ENSOMEG00000016618	pabpn1	72	72.727	Oryzias_melastigma
ENSODEG00000003739	-	75	86.425	ENSOGAG00000008710	PABPN1	92	82.206	Otolemur_garnettii
ENSODEG00000003739	-	63	85.714	ENSOARG00000019336	BCL2L2-PABPN1	52	85.714	Ovis_aries
ENSODEG00000003739	-	63	85.714	ENSPPAG00000028984	BCL2L2-PABPN1	92	82.581	Pan_paniscus
ENSODEG00000003739	-	55	75.776	ENSPPAG00000039421	-	93	75.776	Pan_paniscus
ENSODEG00000003739	-	75	86.425	ENSPPRG00000010567	PABPN1	92	82.206	Panthera_pardus
ENSODEG00000003739	-	55	83.832	ENSPTIG00000001063	BCL2L2-PABPN1	94	83.832	Panthera_tigris_altaica
ENSODEG00000003739	-	75	86.425	ENSPTRG00000006167	BCL2L2	92	82.206	Pan_troglodytes
ENSODEG00000003739	-	95	69.811	ENSPTRG00000047273	-	99	70.943	Pan_troglodytes
ENSODEG00000003739	-	75	86.425	ENSPANG00000021100	BCL2L2-PABPN1	92	82.206	Papio_anubis
ENSODEG00000003739	-	100	71.478	ENSPANG00000023326	-	99	85.106	Papio_anubis
ENSODEG00000003739	-	66	75.676	ENSPKIG00000008144	-	67	73.500	Paramormyrops_kingsleyae
ENSODEG00000003739	-	66	61.290	ENSPKIG00000008340	pabpn1l	92	62.234	Paramormyrops_kingsleyae
ENSODEG00000003739	-	70	72.464	ENSPKIG00000018052	pabpn1	86	73.529	Paramormyrops_kingsleyae
ENSODEG00000003739	-	83	64.050	ENSPMGG00000022027	pabpn1	69	73.298	Periophthalmus_magnuspinnatus
ENSODEG00000003739	-	95	83.032	ENSPEMG00000008332	Gm20521	96	83.648	Peromyscus_maniculatus_bairdii
ENSODEG00000003739	-	57	71.856	ENSPMAG00000006212	pabpn1	84	70.149	Petromyzon_marinus
ENSODEG00000003739	-	71	83.886	ENSPCIG00000027751	-	92	79.715	Phascolarctos_cinereus
ENSODEG00000003739	-	80	61.017	ENSPFOG00000010351	pabpn1	86	72.195	Poecilia_formosa
ENSODEG00000003739	-	83	61.789	ENSPLAG00000022696	pabpn1	68	71.782	Poecilia_latipinna
ENSODEG00000003739	-	70	70.673	ENSPMEG00000020856	pabpn1	86	72.195	Poecilia_mexicana
ENSODEG00000003739	-	88	62.891	ENSPREG00000011278	pabpn1	86	72.683	Poecilia_reticulata
ENSODEG00000003739	-	88	79.389	ENSPPYG00000005663	PABPN1	74	85.646	Pongo_abelii
ENSODEG00000003739	-	70	75.238	ENSPCAG00000005902	PABPN1	92	73.333	Procavia_capensis
ENSODEG00000003739	-	95	78.388	ENSPCOG00000028047	BCL2L2-PABPN1	92	82.562	Propithecus_coquereli
ENSODEG00000003739	-	71	83.412	ENSPVAG00000005270	PABPN1	92	76.429	Pteropus_vampyrus
ENSODEG00000003739	-	88	63.035	ENSPNYG00000013182	pabpn1	86	74.384	Pundamilia_nyererei
ENSODEG00000003739	-	88	63.424	ENSPNAG00000023526	pabpn1	86	74.877	Pygocentrus_nattereri
ENSODEG00000003739	-	67	60.938	ENSPNAG00000021666	pabpn1l	94	63.542	Pygocentrus_nattereri
ENSODEG00000003739	-	95	82.671	ENSRNOG00000042195	Pabpn1	92	83.394	Rattus_norvegicus
ENSODEG00000003739	-	58	84.746	ENSRBIG00000040762	BCL2L2-PABPN1	55	84.746	Rhinopithecus_bieti
ENSODEG00000003739	-	71	73.913	ENSRBIG00000042811	-	88	73.913	Rhinopithecus_bieti
ENSODEG00000003739	-	100	76.817	ENSRBIG00000039547	-	75	81.726	Rhinopithecus_bieti
ENSODEG00000003739	-	100	77.509	ENSRROG00000040409	-	75	82.234	Rhinopithecus_roxellana
ENSODEG00000003739	-	99	65.744	ENSRROG00000036409	-	89	68.116	Rhinopithecus_roxellana
ENSODEG00000003739	-	58	84.746	ENSRROG00000045535	BCL2L2-PABPN1	94	83.832	Rhinopithecus_roxellana
ENSODEG00000003739	-	63	80.198	ENSSBOG00000026930	BCL2L2-PABPN1	92	82.581	Saimiri_boliviensis_boliviensis
ENSODEG00000003739	-	89	59.922	ENSSHAG00000007707	-	89	65.877	Sarcophilus_harrisii
ENSODEG00000003739	-	74	74.312	ENSSHAG00000014841	-	87	84.656	Sarcophilus_harrisii
ENSODEG00000003739	-	70	69.856	ENSSFOG00015014718	pabpn1	86	73.892	Scleropages_formosus
ENSODEG00000003739	-	66	61.257	ENSSFOG00015015833	pabpn1l	88	61.658	Scleropages_formosus
ENSODEG00000003739	-	73	66.516	ENSSFOG00015012565	pabpn1	90	73.399	Scleropages_formosus
ENSODEG00000003739	-	88	62.646	ENSSMAG00000020157	pabpn1	86	74.384	Scophthalmus_maximus
ENSODEG00000003739	-	88	63.786	ENSSDUG00000020582	pabpn1	67	73.500	Seriola_dumerili
ENSODEG00000003739	-	88	62.646	ENSSLDG00000007118	pabpn1	86	74.384	Seriola_lalandi_dorsalis
ENSODEG00000003739	-	55	79.042	ENSSPUG00000018308	-	94	79.042	Sphenodon_punctatus
ENSODEG00000003739	-	88	65.098	ENSSPAG00000021658	pabpn1	86	74.020	Stegastes_partitus
ENSODEG00000003739	-	75	86.425	ENSSSCG00000002023	PABPN1	92	82.206	Sus_scrofa
ENSODEG00000003739	-	76	68.519	ENSSSCG00000034805	-	76	68.020	Sus_scrofa
ENSODEG00000003739	-	58	52.469	ENSSSCG00000038472	-	89	52.667	Sus_scrofa
ENSODEG00000003739	-	88	63.424	ENSTRUG00000023664	pabpn1	86	75.369	Takifugu_rubripes
ENSODEG00000003739	-	70	71.498	ENSTNIG00000005369	pabpn1	93	71.569	Tetraodon_nigroviridis
ENSODEG00000003739	-	75	86.425	ENSUAMG00000024460	PABPN1	92	81.851	Ursus_americanus
ENSODEG00000003739	-	63	85.714	ENSUMAG00000014288	BCL2L2-PABPN1	57	85.714	Ursus_maritimus
ENSODEG00000003739	-	73	76.018	ENSVVUG00000019912	BCL2L2-PABPN1	76	84.456	Vulpes_vulpes
ENSODEG00000003739	-	66	79.487	ENSXETG00000014597	pabpn1	70	79.126	Xenopus_tropicalis
ENSODEG00000003739	-	57	64.072	ENSXCOG00000005158	pabpn1	85	73.611	Xiphophorus_couchianus
ENSODEG00000003739	-	88	63.281	ENSXMAG00000006196	pabpn1	86	73.171	Xiphophorus_maculatus