EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003770 (Gene tree)
Gene ID: 101565688
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 34066 bases
Position: chrJH651656.1:1736923-1770988
Accession: 101565688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000004976	PRP4	PF08799.11	2.3e-13	1	1
ENSODEP00000004976	Prp18	PF02840.15	4.5e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005066	-	1038	XM_004641747	ENSODEP00000004976	342 (aa)	XP_004641804	UPI0003339012

Gene Model

Click here to download ENSODEG00000003770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003770	-	100	99.123	ENSG00000165630	PRPF18	100	99.123	Homo_sapiens
ENSODEG00000003770	-	100	84.795	ENSAPOG00000024177	prpf18	100	84.795	Acanthochromis_polyacanthus
ENSODEG00000003770	-	100	98.538	ENSAMEG00000013591	-	100	98.538	Ailuropoda_melanoleuca
ENSODEG00000003770	-	100	83.626	ENSACIG00000001186	prpf18	100	83.626	Amphilophus_citrinellus
ENSODEG00000003770	-	98	84.776	ENSAOCG00000006572	prpf18	94	82.164	Amphiprion_ocellaris
ENSODEG00000003770	-	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSODEG00000003770	-	100	83.626	ENSATEG00000000303	prpf18	100	83.626	Anabas_testudineus
ENSODEG00000003770	-	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSODEG00000003770	-	100	92.151	ENSACAG00000000818	-	100	92.151	Anolis_carolinensis
ENSODEG00000003770	-	100	98.538	ENSANAG00000037445	-	100	98.538	Aotus_nancymaae
ENSODEG00000003770	-	100	84.211	ENSACLG00000026296	prpf18	100	84.211	Astatotilapia_calliptera
ENSODEG00000003770	-	100	83.429	ENSAMXG00000012848	prpf18	100	83.429	Astyanax_mexicanus
ENSODEG00000003770	-	100	98.246	ENSBTAG00000017244	PRPF18	100	98.246	Bos_taurus
ENSODEG00000003770	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSODEG00000003770	-	100	98.538	ENSCJAG00000009432	-	100	98.538	Callithrix_jacchus
ENSODEG00000003770	-	100	98.538	ENSCAFG00000004735	-	100	98.538	Canis_familiaris
ENSODEG00000003770	-	100	98.538	ENSCAFG00020007712	-	100	98.538	Canis_lupus_dingo
ENSODEG00000003770	-	100	98.246	ENSCHIG00000000499	-	100	98.246	Capra_hircus
ENSODEG00000003770	-	100	98.830	ENSTSYG00000003517	-	100	98.830	Carlito_syrichta
ENSODEG00000003770	-	100	99.123	ENSCPOG00000021069	-	100	99.123	Cavia_porcellus
ENSODEG00000003770	-	100	98.538	ENSCCAG00000036822	-	100	98.538	Cebus_capucinus
ENSODEG00000003770	-	100	88.304	ENSCATG00000016633	-	100	88.304	Cercocebus_atys
ENSODEG00000003770	-	100	98.246	ENSCLAG00000011770	-	100	98.246	Chinchilla_lanigera
ENSODEG00000003770	-	100	96.581	ENSCSAG00000013109	-	100	96.581	Chlorocebus_sabaeus
ENSODEG00000003770	-	100	88.483	ENSCPBG00000003100	-	100	89.045	Chrysemys_picta_bellii
ENSODEG00000003770	-	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSODEG00000003770	-	99	54.360	ENSCSAVG00000010546	-	99	54.070	Ciona_savignyi
ENSODEG00000003770	-	100	98.830	ENSCANG00000034900	-	100	98.830	Colobus_angolensis_palliatus
ENSODEG00000003770	-	100	98.538	ENSCGRG00001023665	Prpf18	100	98.538	Cricetulus_griseus_chok1gshd
ENSODEG00000003770	-	100	98.538	ENSCGRG00000014690	Prpf18	100	98.538	Cricetulus_griseus_crigri
ENSODEG00000003770	-	100	82.164	ENSCSEG00000005536	prpf18	99	82.164	Cynoglossus_semilaevis
ENSODEG00000003770	-	100	83.626	ENSCVAG00000012401	prpf18	100	83.626	Cyprinodon_variegatus
ENSODEG00000003770	-	100	84.795	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSODEG00000003770	-	100	97.953	ENSDNOG00000035607	-	100	97.953	Dasypus_novemcinctus
ENSODEG00000003770	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSODEG00000003770	-	99	51.032	FBgn0027784	Prp18	98	50.737	Drosophila_melanogaster
ENSODEG00000003770	-	100	86.842	ENSETEG00000015060	-	100	86.842	Echinops_telfairi
ENSODEG00000003770	-	100	66.282	ENSEBUG00000016502	prpf18	99	65.418	Eptatretus_burgeri
ENSODEG00000003770	-	100	98.830	ENSEASG00005019373	-	100	98.830	Equus_asinus_asinus
ENSODEG00000003770	-	100	98.830	ENSECAG00000006997	PRPF18	100	98.830	Equus_caballus
ENSODEG00000003770	-	92	62.658	ENSEEUG00000001171	-	100	62.658	Erinaceus_europaeus
ENSODEG00000003770	-	100	82.216	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSODEG00000003770	-	100	98.246	ENSFCAG00000004436	-	100	98.246	Felis_catus
ENSODEG00000003770	-	92	88.073	ENSFALG00000001912	-	97	88.923	Ficedula_albicollis
ENSODEG00000003770	-	94	98.438	ENSFDAG00000014026	-	100	98.438	Fukomys_damarensis
ENSODEG00000003770	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSODEG00000003770	-	80	88.645	ENSFHEG00000020125	prpf18	98	88.764	Fundulus_heteroclitus
ENSODEG00000003770	-	99	79.472	ENSGMOG00000012210	prpf18	99	79.472	Gadus_morhua
ENSODEG00000003770	-	100	92.105	ENSGALG00000043593	-	100	92.105	Gallus_gallus
ENSODEG00000003770	-	100	82.456	ENSGAFG00000006034	prpf18	100	82.456	Gambusia_affinis
ENSODEG00000003770	-	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSODEG00000003770	-	100	91.813	ENSGAGG00000016878	-	100	91.813	Gopherus_agassizii
ENSODEG00000003770	-	92	99.051	ENSGGOG00000025188	-	96	99.051	Gorilla_gorilla
ENSODEG00000003770	-	100	84.211	ENSHBUG00000010264	prpf18	100	84.211	Haplochromis_burtoni
ENSODEG00000003770	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSODEG00000003770	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSODEG00000003770	-	100	83.918	ENSHCOG00000015987	prpf18	100	83.918	Hippocampus_comes
ENSODEG00000003770	-	100	81.586	ENSIPUG00000007432	prpf18	100	82.436	Ictalurus_punctatus
ENSODEG00000003770	-	100	97.368	ENSSTOG00000008735	-	100	97.368	Ictidomys_tridecemlineatus
ENSODEG00000003770	-	100	99.123	ENSJJAG00000024041	-	100	99.123	Jaculus_jaculus
ENSODEG00000003770	-	100	72.334	ENSJJAG00000015191	-	100	72.334	Jaculus_jaculus
ENSODEG00000003770	-	100	83.041	ENSKMAG00000012124	prpf18	100	83.041	Kryptolebias_marmoratus
ENSODEG00000003770	-	99	82.840	ENSLBEG00000028466	prpf18	99	82.840	Labrus_bergylta
ENSODEG00000003770	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSODEG00000003770	-	100	89.766	ENSLOCG00000016736	prpf18	100	89.766	Lepisosteus_oculatus
ENSODEG00000003770	-	100	99.123	ENSLAFG00000007753	-	100	99.123	Loxodonta_africana
ENSODEG00000003770	-	100	99.123	ENSMFAG00000000540	-	100	99.123	Macaca_fascicularis
ENSODEG00000003770	-	100	99.123	ENSMMUG00000015071	PRPF18	100	99.123	Macaca_mulatta
ENSODEG00000003770	-	100	99.123	ENSMNEG00000024679	-	100	99.123	Macaca_nemestrina
ENSODEG00000003770	-	100	83.918	ENSMLEG00000031715	-	100	83.918	Mandrillus_leucophaeus
ENSODEG00000003770	-	100	82.749	ENSMAMG00000006610	prpf18	100	82.749	Mastacembelus_armatus
ENSODEG00000003770	-	100	84.211	ENSMZEG00005019392	prpf18	100	84.211	Maylandia_zebra
ENSODEG00000003770	-	100	92.105	ENSMGAG00000005023	-	100	92.105	Meleagris_gallopavo
ENSODEG00000003770	-	100	98.830	ENSMICG00000006572	-	100	98.830	Microcebus_murinus
ENSODEG00000003770	-	100	99.123	ENSMOCG00000021468	Prpf18	100	99.123	Microtus_ochrogaster
ENSODEG00000003770	-	100	82.456	ENSMMOG00000013012	prpf18	100	82.456	Mola_mola
ENSODEG00000003770	-	96	91.420	ENSMODG00000016902	-	92	91.420	Monodelphis_domestica
ENSODEG00000003770	-	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSODEG00000003770	-	100	77.429	ENSMALG00000005486	prpf18	100	77.714	Monopterus_albus
ENSODEG00000003770	-	100	98.538	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSODEG00000003770	-	100	98.246	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSODEG00000003770	-	100	98.830	MGP_PahariEiJ_G0019203	Prpf18	100	98.830	Mus_pahari
ENSODEG00000003770	-	100	97.953	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSODEG00000003770	-	100	98.246	ENSMPUG00000000938	-	100	98.246	Mustela_putorius_furo
ENSODEG00000003770	-	100	98.246	ENSMLUG00000009200	-	100	98.246	Myotis_lucifugus
ENSODEG00000003770	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSODEG00000003770	-	100	98.538	ENSNGAG00000012500	-	100	98.538	Nannospalax_galili
ENSODEG00000003770	-	100	84.211	ENSNBRG00000001778	prpf18	100	84.211	Neolamprologus_brichardi
ENSODEG00000003770	-	100	99.123	ENSNLEG00000012186	-	100	99.123	Nomascus_leucogenys
ENSODEG00000003770	-	100	65.497	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSODEG00000003770	-	77	80.755	ENSOPRG00000002153	-	100	80.755	Ochotona_princeps
ENSODEG00000003770	-	98	83.582	ENSONIG00000014854	prpf18	96	83.582	Oreochromis_niloticus
ENSODEG00000003770	-	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSODEG00000003770	-	100	98.830	ENSOCUG00000027756	-	100	94.737	Oryctolagus_cuniculus
ENSODEG00000003770	-	100	81.714	ENSORLG00000010293	prpf18	100	81.714	Oryzias_latipes
ENSODEG00000003770	-	100	83.918	ENSORLG00020001530	prpf18	100	83.918	Oryzias_latipes_hni
ENSODEG00000003770	-	100	83.626	ENSORLG00015013705	prpf18	100	83.626	Oryzias_latipes_hsok
ENSODEG00000003770	-	100	85.088	ENSOMEG00000009167	prpf18	100	85.088	Oryzias_melastigma
ENSODEG00000003770	-	100	97.953	ENSOGAG00000007294	-	100	97.953	Otolemur_garnettii
ENSODEG00000003770	-	100	95.726	ENSOARG00000006243	-	100	95.726	Ovis_aries
ENSODEG00000003770	-	100	99.123	ENSPPAG00000041959	-	100	99.123	Pan_paniscus
ENSODEG00000003770	-	100	98.246	ENSPPRG00000000107	-	100	98.246	Panthera_pardus
ENSODEG00000003770	-	100	97.953	ENSPTIG00000021094	-	100	97.953	Panthera_tigris_altaica
ENSODEG00000003770	-	100	99.123	ENSPTRG00000002306	PRPF18	100	99.123	Pan_troglodytes
ENSODEG00000003770	-	100	99.415	ENSPANG00000023346	-	100	99.415	Papio_anubis
ENSODEG00000003770	-	86	98.113	ENSPKIG00000014128	prpf18	96	81.481	Paramormyrops_kingsleyae
ENSODEG00000003770	-	100	92.105	ENSPSIG00000016064	-	100	92.105	Pelodiscus_sinensis
ENSODEG00000003770	-	100	78.363	ENSPMGG00000016486	prpf18	100	78.363	Periophthalmus_magnuspinnatus
ENSODEG00000003770	-	100	98.830	ENSPEMG00000013704	Prpf18	100	98.830	Peromyscus_maniculatus_bairdii
ENSODEG00000003770	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSODEG00000003770	-	92	96.519	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSODEG00000003770	-	100	81.143	ENSPFOG00000017611	prpf18	100	81.143	Poecilia_formosa
ENSODEG00000003770	-	100	82.749	ENSPLAG00000000369	prpf18	100	82.749	Poecilia_latipinna
ENSODEG00000003770	-	100	82.749	ENSPMEG00000005183	prpf18	100	82.749	Poecilia_mexicana
ENSODEG00000003770	-	100	82.456	ENSPREG00000015232	prpf18	100	82.456	Poecilia_reticulata
ENSODEG00000003770	-	100	98.830	ENSPPYG00000002101	PRPF18	100	98.830	Pongo_abelii
ENSODEG00000003770	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSODEG00000003770	-	100	91.520	ENSPCOG00000013057	-	100	91.520	Propithecus_coquereli
ENSODEG00000003770	-	100	61.111	ENSPVAG00000002947	-	100	61.111	Pteropus_vampyrus
ENSODEG00000003770	-	100	84.211	ENSPNYG00000003554	prpf18	100	84.211	Pundamilia_nyererei
ENSODEG00000003770	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSODEG00000003770	-	100	98.246	ENSRNOG00000018396	Prpf18	100	98.246	Rattus_norvegicus
ENSODEG00000003770	-	100	98.538	ENSRBIG00000028028	-	100	98.538	Rhinopithecus_bieti
ENSODEG00000003770	-	100	98.830	ENSRROG00000040695	-	100	98.830	Rhinopithecus_roxellana
ENSODEG00000003770	-	100	98.538	ENSSBOG00000034482	-	100	98.538	Saimiri_boliviensis_boliviensis
ENSODEG00000003770	-	100	96.491	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSODEG00000003770	-	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSODEG00000003770	-	98	80.580	ENSSFOG00015022118	prpf18	100	76.369	Scleropages_formosus
ENSODEG00000003770	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSODEG00000003770	-	100	83.041	ENSSMAG00000005308	prpf18	100	83.041	Scophthalmus_maximus
ENSODEG00000003770	-	100	84.503	ENSSDUG00000015428	prpf18	100	84.503	Seriola_dumerili
ENSODEG00000003770	-	100	84.503	ENSSLDG00000023989	prpf18	100	84.503	Seriola_lalandi_dorsalis
ENSODEG00000003770	-	100	68.129	ENSSARG00000005307	-	100	68.129	Sorex_araneus
ENSODEG00000003770	-	100	92.690	ENSSPUG00000002619	-	100	92.690	Sphenodon_punctatus
ENSODEG00000003770	-	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSODEG00000003770	-	100	98.538	ENSSSCG00000026354	-	100	98.538	Sus_scrofa
ENSODEG00000003770	-	100	92.105	ENSTGUG00000002286	-	100	92.105	Taeniopygia_guttata
ENSODEG00000003770	-	100	81.579	ENSTRUG00000011278	prpf18	100	81.579	Takifugu_rubripes
ENSODEG00000003770	-	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSODEG00000003770	-	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSODEG00000003770	-	100	98.830	ENSTTRG00000011117	PRPF18	100	98.830	Tursiops_truncatus
ENSODEG00000003770	-	95	95.385	ENSUAMG00000001815	-	94	95.385	Ursus_americanus
ENSODEG00000003770	-	100	93.567	ENSUMAG00000012329	-	100	93.567	Ursus_maritimus
ENSODEG00000003770	-	100	92.982	ENSVPAG00000011486	-	100	92.982	Vicugna_pacos
ENSODEG00000003770	-	100	98.538	ENSVVUG00000005453	-	100	98.538	Vulpes_vulpes
ENSODEG00000003770	-	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSODEG00000003770	-	100	81.977	ENSXCOG00000020414	prpf18	100	81.977	Xiphophorus_couchianus
ENSODEG00000003770	-	100	82.456	ENSXMAG00000004713	prpf18	91	82.456	Xiphophorus_maculatus