EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000003860 (Gene tree)
Gene ID: 101563642
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 17337 bases
Position: chrJH651802.1:1070909-1088245
Accession: 101563642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005104	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005196	RAB5B-201	1433	XM_004647088	ENSODEP00000005104	215 (aa)	XP_004647145	UPI0003340219

Gene Model

Click here to download ENSODEG00000003860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000003860	RAB5B	76	32.727	ENSODEG00000010412	KRAS	90	31.579
ENSODEG00000003860	RAB5B	86	41.304	ENSODEG00000001343	RAB2B	85	41.304
ENSODEG00000003860	RAB5B	83	37.705	ENSODEG00000011726	RAB33A	77	37.705
ENSODEG00000003860	RAB5B	74	37.500	ENSODEG00000016056	RAB23	67	37.500
ENSODEG00000003860	RAB5B	73	35.625	ENSODEG00000009016	RAB36	55	35.625
ENSODEG00000003860	RAB5B	75	45.342	ENSODEG00000009908	RAB25	76	45.342
ENSODEG00000003860	RAB5B	98	85.714	ENSODEG00000017920	RAB5C	97	85.714
ENSODEG00000003860	RAB5B	78	35.882	ENSODEG00000000520	RAB39B	80	35.882
ENSODEG00000003860	RAB5B	70	43.871	ENSODEG00000002835	RAB7A	94	43.871
ENSODEG00000003860	RAB5B	53	39.130	ENSODEG00000015650	-	51	39.130
ENSODEG00000003860	RAB5B	82	38.462	ENSODEG00000002979	RAB33B	79	38.462
ENSODEG00000003860	RAB5B	82	45.198	ENSODEG00000017847	-	87	45.198
ENSODEG00000003860	RAB5B	82	36.932	ENSODEG00000013827	RAB15	83	36.932
ENSODEG00000003860	RAB5B	91	43.689	ENSODEG00000011371	RAB11B	94	43.689
ENSODEG00000003860	RAB5B	82	33.333	ENSODEG00000015703	HRAS	96	33.333
ENSODEG00000003860	RAB5B	54	42.735	ENSODEG00000012634	-	92	42.735
ENSODEG00000003860	RAB5B	87	42.408	ENSODEG00000011248	-	96	42.784
ENSODEG00000003860	RAB5B	90	39.175	ENSODEG00000016788	-	95	39.683
ENSODEG00000003860	RAB5B	89	39.896	ENSODEG00000010443	-	95	39.896
ENSODEG00000003860	RAB5B	62	30.282	ENSODEG00000011676	ARL8A	73	30.282
ENSODEG00000003860	RAB5B	90	37.949	ENSODEG00000007219	RAB35	96	37.949
ENSODEG00000003860	RAB5B	90	38.462	ENSODEG00000004150	-	93	38.462
ENSODEG00000003860	RAB5B	68	86.301	ENSODEG00000000290	-	99	86.301
ENSODEG00000003860	RAB5B	87	77.249	ENSODEG00000019065	-	100	77.249
ENSODEG00000003860	RAB5B	90	33.971	ENSODEG00000002594	-	71	33.971
ENSODEG00000003860	RAB5B	90	47.938	ENSODEG00000000054	RAB22A	98	47.938
ENSODEG00000003860	RAB5B	75	43.478	ENSODEG00000002369	-	76	43.478
ENSODEG00000003860	RAB5B	78	42.857	ENSODEG00000003833	RAB30	83	42.857
ENSODEG00000003860	RAB5B	79	35.673	ENSODEG00000006414	RAB12	84	35.870
ENSODEG00000003860	RAB5B	75	44.720	ENSODEG00000002013	RAB14	75	44.720
ENSODEG00000003860	RAB5B	78	32.353	ENSODEG00000009994	RERG	84	32.353
ENSODEG00000003860	RAB5B	93	35.294	ENSODEG00000019004	RAB9A	99	35.294
ENSODEG00000003860	RAB5B	83	30.556	ENSODEG00000007937	NRAS	94	30.556
ENSODEG00000003860	RAB5B	82	33.333	ENSODEG00000009963	RHEB	93	33.333
ENSODEG00000003860	RAB5B	90	40.000	ENSODEG00000010425	RAB24	96	41.000
ENSODEG00000003860	RAB5B	77	45.181	ENSODEG00000005942	RAB6A	80	45.181
ENSODEG00000003860	RAB5B	62	30.986	ENSODEG00000009293	ARL8B	73	30.986
ENSODEG00000003860	RAB5B	75	47.205	ENSODEG00000016878	-	75	47.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003860	RAB5B	100	99.535	ENSG00000111540	RAB5B	100	99.535	Homo_sapiens
ENSODEG00000003860	RAB5B	100	98.157	ENSAMEG00000003196	RAB5B	100	98.157	Ailuropoda_melanoleuca
ENSODEG00000003860	RAB5B	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
ENSODEG00000003860	RAB5B	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSODEG00000003860	RAB5B	100	99.070	ENSBTAG00000014129	RAB5B	100	99.070	Bos_taurus
ENSODEG00000003860	RAB5B	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSODEG00000003860	RAB5B	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSODEG00000003860	RAB5B	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSODEG00000003860	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	97	100.000	Capra_hircus
ENSODEG00000003860	RAB5B	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSODEG00000003860	RAB5B	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSODEG00000003860	RAB5B	100	98.605	ENSCCAG00000019480	RAB5B	100	98.605	Cebus_capucinus
ENSODEG00000003860	RAB5B	83	98.883	ENSCATG00000034978	RAB5B	98	98.883	Cercocebus_atys
ENSODEG00000003860	RAB5B	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
ENSODEG00000003860	RAB5B	100	95.814	ENSCPBG00000012712	RAB5B	100	95.814	Chrysemys_picta_bellii
ENSODEG00000003860	RAB5B	100	99.070	ENSCGRG00001000428	Rab5b	100	99.070	Cricetulus_griseus_chok1gshd
ENSODEG00000003860	RAB5B	100	99.070	ENSCGRG00000009508	-	100	99.070	Cricetulus_griseus_crigri
ENSODEG00000003860	RAB5B	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSODEG00000003860	RAB5B	100	99.070	ENSECAG00000023306	RAB5B	100	99.070	Equus_caballus
ENSODEG00000003860	RAB5B	100	98.605	ENSEEUG00000006745	RAB5B	100	98.605	Erinaceus_europaeus
ENSODEG00000003860	RAB5B	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSODEG00000003860	RAB5B	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSODEG00000003860	RAB5B	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSODEG00000003860	RAB5B	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSODEG00000003860	RAB5B	100	99.070	ENSJJAG00000019506	Rab5b	100	99.070	Jaculus_jaculus
ENSODEG00000003860	RAB5B	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSODEG00000003860	RAB5B	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
ENSODEG00000003860	RAB5B	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
ENSODEG00000003860	RAB5B	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
ENSODEG00000003860	RAB5B	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
ENSODEG00000003860	RAB5B	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSODEG00000003860	RAB5B	100	99.070	ENSMICG00000011086	RAB5B	100	99.070	Microcebus_murinus
ENSODEG00000003860	RAB5B	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSODEG00000003860	RAB5B	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSODEG00000003860	RAB5B	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSODEG00000003860	RAB5B	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSODEG00000003860	RAB5B	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSODEG00000003860	RAB5B	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSODEG00000003860	RAB5B	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSODEG00000003860	RAB5B	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSODEG00000003860	RAB5B	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSODEG00000003860	RAB5B	100	99.535	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSODEG00000003860	RAB5B	99	97.664	ENSPANG00000021075	RAB5B	97	97.664	Papio_anubis
ENSODEG00000003860	RAB5B	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSODEG00000003860	RAB5B	100	98.605	ENSRNOG00000006130	Rab5b	100	98.605	Rattus_norvegicus
ENSODEG00000003860	RAB5B	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
ENSODEG00000003860	RAB5B	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
ENSODEG00000003860	RAB5B	100	82.791	ENSSBOG00000035419	RAB5B	100	82.791	Saimiri_boliviensis_boliviensis
ENSODEG00000003860	RAB5B	100	98.140	ENSSHAG00000007727	RAB5B	100	98.140	Sarcophilus_harrisii
ENSODEG00000003860	RAB5B	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSODEG00000003860	RAB5B	100	95.814	ENSSPUG00000014873	RAB5B	100	95.814	Sphenodon_punctatus
ENSODEG00000003860	RAB5B	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSODEG00000003860	RAB5B	100	99.070	ENSUAMG00000014651	RAB5B	100	99.070	Ursus_americanus
ENSODEG00000003860	RAB5B	100	99.070	ENSUMAG00000016263	RAB5B	100	99.070	Ursus_maritimus
ENSODEG00000003860	RAB5B	68	99.315	ENSVVUG00000022054	RAB5B	81	99.315	Vulpes_vulpes