EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003882 (Gene tree)
Gene ID: 101579969
Gene Symbol: TRANK1
Alias: -
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 173803 bases
Position: chrJH651586.1:3574708-3748510
Accession: 101579969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005127	UvrD-helicase	PF00580.21	7.3e-05	1	1
ENSODEP00000005128	UvrD-helicase	PF00580.21	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005219	TRANK1-201	8835	-	ENSODEP00000005127	2944 (aa)	-	-
ENSODET00000005220	TRANK1-202	8871	XM_004635299	ENSODEP00000005128	2956 (aa)	-	-

Gene Model

Click here to download ENSODEG00000003882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003882	TRANK1	84	58.333	ENSAPLG00000010356	TRANK1	99	58.333	Anas_platyrhynchos
ENSODEG00000003882	TRANK1	52	79.112	ENSCAFG00020001387	TRANK1	96	78.460	Canis_lupus_dingo
ENSODEG00000003882	TRANK1	98	81.883	ENSTSYG00000025860	TRANK1	99	82.267	Carlito_syrichta
ENSODEG00000003882	TRANK1	98	93.815	ENSCLAG00000003643	TRANK1	99	94.555	Chinchilla_lanigera
ENSODEG00000003882	TRANK1	97	63.034	ENSCPBG00000013529	TRANK1	99	63.744	Chrysemys_picta_bellii
ENSODEG00000003882	TRANK1	97	83.259	ENSCANG00000039915	TRANK1	99	82.259	Colobus_angolensis_palliatus
ENSODEG00000003882	TRANK1	95	79.755	ENSDNOG00000003573	TRANK1	98	78.282	Dasypus_novemcinctus
ENSODEG00000003882	TRANK1	99	80.278	ENSEASG00005007374	TRANK1	98	81.626	Equus_asinus_asinus
ENSODEG00000003882	TRANK1	97	80.293	ENSECAG00000018264	TRANK1	98	80.293	Equus_caballus
ENSODEG00000003882	TRANK1	82	79.206	ENSEEUG00000008528	TRANK1	100	79.165	Erinaceus_europaeus
ENSODEG00000003882	TRANK1	97	56.203	ENSFALG00000002875	TRANK1	98	56.233	Ficedula_albicollis
ENSODEG00000003882	TRANK1	70	60.336	ENSGALG00000037629	TRANK1	97	60.182	Gallus_gallus
ENSODEG00000003882	TRANK1	88	62.648	ENSGAGG00000009012	TRANK1	100	62.316	Gopherus_agassizii
ENSODEG00000003882	TRANK1	97	47.314	ENSLOCG00000004808	TRANK1	99	46.510	Lepisosteus_oculatus
ENSODEG00000003882	TRANK1	97	56.755	ENSMGAG00000011934	TRANK1	99	56.780	Meleagris_gallopavo
ENSODEG00000003882	TRANK1	97	82.157	ENSMLUG00000003537	TRANK1	100	82.330	Myotis_lucifugus
ENSODEG00000003882	TRANK1	97	61.395	ENSPSIG00000010217	TRANK1	98	61.627	Pelodiscus_sinensis
ENSODEG00000003882	TRANK1	66	72.038	ENSPCAG00000002172	-	87	72.123	Procavia_capensis
ENSODEG00000003882	TRANK1	80	75.737	ENSPVAG00000004199	TRANK1	100	75.786	Pteropus_vampyrus
ENSODEG00000003882	TRANK1	97	83.470	ENSRBIG00000012281	TRANK1	99	82.503	Rhinopithecus_bieti
ENSODEG00000003882	TRANK1	97	83.470	ENSRROG00000044487	TRANK1	99	82.503	Rhinopithecus_roxellana
ENSODEG00000003882	TRANK1	60	87.263	ENSSARG00000007861	-	74	87.263	Sorex_araneus
ENSODEG00000003882	TRANK1	72	67.004	ENSSPUG00000015974	TRANK1	93	77.009	Sphenodon_punctatus
ENSODEG00000003882	TRANK1	83	58.646	ENSTGUG00000005694	TRANK1	100	58.605	Taeniopygia_guttata
ENSODEG00000003882	TRANK1	52	79.711	ENSUAMG00000027609	-	97	78.759	Ursus_americanus
ENSODEG00000003882	TRANK1	52	78.769	ENSUMAG00000006416	TRANK1	97	77.820	Ursus_maritimus
ENSODEG00000003882	TRANK1	52	78.737	ENSVVUG00000007788	TRANK1	96	78.084	Vulpes_vulpes