EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000003984 (Gene tree)
Gene ID: 101579887
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 40853 bases
Position: chrJH651633.1:604918-645770
Accession: 101579887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005266	POP1	PF06978.11	5.4e-37	1	2
ENSODEP00000005266	POP1	PF06978.11	5.4e-37	2	2
ENSODEP00000005266	POPLD	PF08170.12	6.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005363	POP1-201	3060	XM_004640059	ENSODEP00000005266	1019 (aa)	XP_004640117	-

Gene Model

Click here to download ENSODEG00000003984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000003984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000003984	POP1	100	80.409	ENSG00000104356	POP1	100	89.071	Homo_sapiens
ENSODEG00000003984	POP1	100	47.438	ENSAPOG00000008198	pop1	100	47.438	Acanthochromis_polyacanthus
ENSODEG00000003984	POP1	100	77.713	ENSAMEG00000000556	POP1	100	77.713	Ailuropoda_melanoleuca
ENSODEG00000003984	POP1	90	49.787	ENSACIG00000004169	POP1	100	46.353	Amphilophus_citrinellus
ENSODEG00000003984	POP1	100	46.604	ENSAOCG00000010991	pop1	100	46.509	Amphiprion_ocellaris
ENSODEG00000003984	POP1	91	46.290	ENSAPEG00000007607	pop1	94	47.059	Amphiprion_percula
ENSODEG00000003984	POP1	100	45.693	ENSATEG00000024814	POP1	100	45.822	Anabas_testudineus
ENSODEG00000003984	POP1	92	60.828	ENSAPLG00000014418	POP1	99	60.339	Anas_platyrhynchos
ENSODEG00000003984	POP1	100	55.034	ENSACAG00000016083	POP1	100	55.233	Anolis_carolinensis
ENSODEG00000003984	POP1	88	86.647	ENSANAG00000026360	POP1	99	86.647	Aotus_nancymaae
ENSODEG00000003984	POP1	100	48.473	ENSACLG00000010951	pop1	100	48.049	Astatotilapia_calliptera
ENSODEG00000003984	POP1	100	45.346	ENSAMXG00000014483	POP1	100	45.247	Astyanax_mexicanus
ENSODEG00000003984	POP1	100	75.828	ENSBTAG00000012596	POP1	100	75.828	Bos_taurus
ENSODEG00000003984	POP1	50	31.783	WBGene00015486	C05D11.9	56	33.486	Caenorhabditis_elegans
ENSODEG00000003984	POP1	100	78.363	ENSCJAG00000015567	POP1	100	78.363	Callithrix_jacchus
ENSODEG00000003984	POP1	100	77.647	ENSCAFG00000000469	POP1	100	77.647	Canis_familiaris
ENSODEG00000003984	POP1	100	78.070	ENSCAFG00020026765	POP1	100	78.070	Canis_lupus_dingo
ENSODEG00000003984	POP1	100	76.218	ENSCHIG00000017066	POP1	100	76.316	Capra_hircus
ENSODEG00000003984	POP1	100	79.337	ENSTSYG00000003097	POP1	100	79.337	Carlito_syrichta
ENSODEG00000003984	POP1	100	81.800	ENSCAPG00000007251	POP1	100	81.800	Cavia_aperea
ENSODEG00000003984	POP1	100	84.495	ENSCPOG00000002901	POP1	100	84.495	Cavia_porcellus
ENSODEG00000003984	POP1	100	78.265	ENSCCAG00000018939	POP1	94	84.444	Cebus_capucinus
ENSODEG00000003984	POP1	100	80.019	ENSCATG00000040916	POP1	100	80.019	Cercocebus_atys
ENSODEG00000003984	POP1	100	88.518	ENSCLAG00000007208	POP1	97	88.518	Chinchilla_lanigera
ENSODEG00000003984	POP1	90	79.870	ENSCSAG00000012340	POP1	98	79.737	Chlorocebus_sabaeus
ENSODEG00000003984	POP1	95	75.460	ENSCHOG00000011432	POP1	100	75.460	Choloepus_hoffmanni
ENSODEG00000003984	POP1	100	62.695	ENSCPBG00000006373	POP1	100	62.183	Chrysemys_picta_bellii
ENSODEG00000003984	POP1	82	39.689	ENSCING00000008323	-	90	38.790	Ciona_intestinalis
ENSODEG00000003984	POP1	100	80.019	ENSCANG00000001647	POP1	100	80.019	Colobus_angolensis_palliatus
ENSODEG00000003984	POP1	100	75.000	ENSCGRG00001017308	Pop1	100	75.000	Cricetulus_griseus_chok1gshd
ENSODEG00000003984	POP1	100	69.531	ENSCGRG00000010824	Pop1	100	69.531	Cricetulus_griseus_crigri
ENSODEG00000003984	POP1	100	45.489	ENSCSEG00000008737	POP1	100	44.911	Cynoglossus_semilaevis
ENSODEG00000003984	POP1	100	45.602	ENSCVAG00000022248	pop1	100	45.559	Cyprinodon_variegatus
ENSODEG00000003984	POP1	100	74.976	ENSDNOG00000019974	POP1	100	74.976	Dasypus_novemcinctus
ENSODEG00000003984	POP1	100	70.136	ENSDORG00000015384	Pop1	100	70.136	Dipodomys_ordii
ENSODEG00000003984	POP1	61	33.956	FBgn0026702	l(1)G0045	69	33.594	Drosophila_melanogaster
ENSODEG00000003984	POP1	89	67.483	ENSETEG00000007839	POP1	88	67.483	Echinops_telfairi
ENSODEG00000003984	POP1	100	79.630	ENSEASG00005003189	POP1	98	79.630	Equus_asinus_asinus
ENSODEG00000003984	POP1	100	79.337	ENSECAG00000024236	POP1	100	79.337	Equus_caballus
ENSODEG00000003984	POP1	67	68.282	ENSEEUG00000003050	-	70	68.282	Erinaceus_europaeus
ENSODEG00000003984	POP1	100	45.428	ENSELUG00000003526	pop1	100	45.489	Esox_lucius
ENSODEG00000003984	POP1	100	79.435	ENSFCAG00000002168	POP1	100	79.435	Felis_catus
ENSODEG00000003984	POP1	100	58.058	ENSFALG00000005711	POP1	100	57.629	Ficedula_albicollis
ENSODEG00000003984	POP1	100	84.390	ENSFDAG00000017068	POP1	100	84.390	Fukomys_damarensis
ENSODEG00000003984	POP1	92	50.887	ENSFHEG00000019518	pop1	100	46.323	Fundulus_heteroclitus
ENSODEG00000003984	POP1	95	46.300	ENSGMOG00000000659	POP1	99	46.361	Gadus_morhua
ENSODEG00000003984	POP1	100	46.848	ENSGAFG00000019770	POP1	100	46.323	Gambusia_affinis
ENSODEG00000003984	POP1	100	46.958	ENSGACG00000003499	pop1	100	46.863	Gasterosteus_aculeatus
ENSODEG00000003984	POP1	100	61.937	ENSGAGG00000011737	POP1	98	61.353	Gopherus_agassizii
ENSODEG00000003984	POP1	100	80.117	ENSGGOG00000003176	POP1	100	80.117	Gorilla_gorilla
ENSODEG00000003984	POP1	100	48.155	ENSHBUG00000021583	pop1	100	48.011	Haplochromis_burtoni
ENSODEG00000003984	POP1	100	85.268	ENSHGLG00000006029	POP1	100	85.268	Heterocephalus_glaber_female
ENSODEG00000003984	POP1	100	85.268	ENSHGLG00100016879	POP1	100	85.268	Heterocephalus_glaber_male
ENSODEG00000003984	POP1	90	47.789	ENSHCOG00000013888	pop1	95	47.546	Hippocampus_comes
ENSODEG00000003984	POP1	99	45.280	ENSIPUG00000018336	pop1	91	60.976	Ictalurus_punctatus
ENSODEG00000003984	POP1	100	80.607	ENSSTOG00000011455	POP1	97	80.607	Ictidomys_tridecemlineatus
ENSODEG00000003984	POP1	100	75.172	ENSJJAG00000013325	Pop1	100	74.681	Jaculus_jaculus
ENSODEG00000003984	POP1	100	47.404	ENSKMAG00000001346	POP1	100	47.404	Kryptolebias_marmoratus
ENSODEG00000003984	POP1	81	53.846	ENSLBEG00000024457	POP1	88	53.846	Labrus_bergylta
ENSODEG00000003984	POP1	93	53.992	ENSLACG00000012498	POP1	99	53.792	Latimeria_chalumnae
ENSODEG00000003984	POP1	100	50.817	ENSLOCG00000009817	POP1	100	50.525	Lepisosteus_oculatus
ENSODEG00000003984	POP1	100	78.516	ENSLAFG00000010770	POP1	100	78.516	Loxodonta_africana
ENSODEG00000003984	POP1	100	80.214	ENSMFAG00000000347	POP1	100	80.214	Macaca_fascicularis
ENSODEG00000003984	POP1	100	79.727	ENSMNEG00000036870	POP1	100	79.727	Macaca_nemestrina
ENSODEG00000003984	POP1	100	80.019	ENSMLEG00000034986	POP1	100	80.019	Mandrillus_leucophaeus
ENSODEG00000003984	POP1	100	46.635	ENSMAMG00000004040	pop1	100	46.730	Mastacembelus_armatus
ENSODEG00000003984	POP1	100	48.253	ENSMZEG00005025448	pop1	100	48.295	Maylandia_zebra
ENSODEG00000003984	POP1	100	56.505	ENSMGAG00000012167	POP1	100	56.654	Meleagris_gallopavo
ENSODEG00000003984	POP1	100	74.609	ENSMAUG00000017537	Pop1	100	74.121	Mesocricetus_auratus
ENSODEG00000003984	POP1	100	79.610	ENSMICG00000004361	POP1	100	79.610	Microcebus_murinus
ENSODEG00000003984	POP1	100	74.364	ENSMOCG00000006356	Pop1	100	74.755	Microtus_ochrogaster
ENSODEG00000003984	POP1	100	43.558	ENSMMOG00000018242	pop1	100	43.558	Mola_mola
ENSODEG00000003984	POP1	100	66.570	ENSMODG00000006561	POP1	100	66.054	Monodelphis_domestica
ENSODEG00000003984	POP1	100	46.323	ENSMALG00000012621	POP1	100	45.897	Monopterus_albus
ENSODEG00000003984	POP1	100	74.780	MGP_CAROLIEiJ_G0019726	Pop1	100	74.780	Mus_caroli
ENSODEG00000003984	POP1	100	75.269	ENSMUSG00000022325	Pop1	100	75.269	Mus_musculus
ENSODEG00000003984	POP1	100	74.976	MGP_PahariEiJ_G0019735	Pop1	100	74.976	Mus_pahari
ENSODEG00000003984	POP1	100	75.269	MGP_SPRETEiJ_G0020622	Pop1	100	75.269	Mus_spretus
ENSODEG00000003984	POP1	100	78.544	ENSMPUG00000015250	POP1	100	78.544	Mustela_putorius_furo
ENSODEG00000003984	POP1	100	74.611	ENSMLUG00000010204	POP1	100	74.611	Myotis_lucifugus
ENSODEG00000003984	POP1	100	78.244	ENSNGAG00000001582	Pop1	100	78.244	Nannospalax_galili
ENSODEG00000003984	POP1	89	48.712	ENSNBRG00000002356	pop1	93	48.712	Neolamprologus_brichardi
ENSODEG00000003984	POP1	100	79.825	ENSNLEG00000002541	POP1	100	79.825	Nomascus_leucogenys
ENSODEG00000003984	POP1	88	71.271	ENSMEUG00000003118	POP1	99	60.287	Notamacropus_eugenii
ENSODEG00000003984	POP1	100	75.977	ENSOPRG00000007667	POP1	100	75.977	Ochotona_princeps
ENSODEG00000003984	POP1	100	49.282	ENSONIG00000016445	pop1	100	48.946	Oreochromis_niloticus
ENSODEG00000003984	POP1	59	69.325	ENSOANG00000001278	-	94	69.325	Ornithorhynchus_anatinus
ENSODEG00000003984	POP1	100	79.243	ENSOCUG00000017400	POP1	100	79.243	Oryctolagus_cuniculus
ENSODEG00000003984	POP1	92	49.057	ENSORLG00000002839	pop1	100	46.367	Oryzias_latipes
ENSODEG00000003984	POP1	90	48.617	ENSORLG00020022450	POP1	95	48.394	Oryzias_latipes_hni
ENSODEG00000003984	POP1	92	49.161	ENSORLG00015012746	POP1	100	46.929	Oryzias_latipes_hsok
ENSODEG00000003984	POP1	100	46.570	ENSOMEG00000006915	pop1	99	47.053	Oryzias_melastigma
ENSODEG00000003984	POP1	100	78.439	ENSOGAG00000001466	POP1	100	78.439	Otolemur_garnettii
ENSODEG00000003984	POP1	100	80.214	ENSPPAG00000018410	POP1	100	80.214	Pan_paniscus
ENSODEG00000003984	POP1	100	79.630	ENSPPRG00000005002	POP1	100	79.630	Panthera_pardus
ENSODEG00000003984	POP1	100	79.825	ENSPTIG00000016527	POP1	100	79.825	Panthera_tigris_altaica
ENSODEG00000003984	POP1	100	80.409	ENSPTRG00000020458	POP1	100	80.409	Pan_troglodytes
ENSODEG00000003984	POP1	100	80.019	ENSPANG00000009704	POP1	100	80.019	Papio_anubis
ENSODEG00000003984	POP1	100	49.664	ENSPKIG00000016325	POP1	100	48.895	Paramormyrops_kingsleyae
ENSODEG00000003984	POP1	100	61.300	ENSPSIG00000012343	POP1	100	61.203	Pelodiscus_sinensis
ENSODEG00000003984	POP1	90	48.550	ENSPMGG00000022253	POP1	94	48.321	Periophthalmus_magnuspinnatus
ENSODEG00000003984	POP1	99	73.684	ENSPEMG00000023633	Pop1	100	73.684	Peromyscus_maniculatus_bairdii
ENSODEG00000003984	POP1	90	43.354	ENSPMAG00000003209	POP1	99	43.390	Petromyzon_marinus
ENSODEG00000003984	POP1	100	66.473	ENSPCIG00000012216	POP1	100	66.957	Phascolarctos_cinereus
ENSODEG00000003984	POP1	100	46.905	ENSPFOG00000012490	POP1	100	46.628	Poecilia_formosa
ENSODEG00000003984	POP1	100	47.246	ENSPLAG00000004646	POP1	100	46.968	Poecilia_latipinna
ENSODEG00000003984	POP1	100	46.968	ENSPMEG00000019592	POP1	100	46.884	Poecilia_mexicana
ENSODEG00000003984	POP1	100	46.815	ENSPREG00000020951	POP1	100	46.731	Poecilia_reticulata
ENSODEG00000003984	POP1	100	80.214	ENSPPYG00000018777	POP1	100	80.214	Pongo_abelii
ENSODEG00000003984	POP1	100	71.303	ENSPCAG00000016662	POP1	100	71.303	Procavia_capensis
ENSODEG00000003984	POP1	100	80.683	ENSPCOG00000019420	POP1	100	80.683	Propithecus_coquereli
ENSODEG00000003984	POP1	100	77.313	ENSPVAG00000014468	POP1	100	77.313	Pteropus_vampyrus
ENSODEG00000003984	POP1	89	49.352	ENSPNYG00000004476	pop1	94	49.352	Pundamilia_nyererei
ENSODEG00000003984	POP1	100	45.102	ENSPNAG00000000265	pop1	100	42.766	Pygocentrus_nattereri
ENSODEG00000003984	POP1	100	74.682	ENSRNOG00000005243	Pop1	100	74.682	Rattus_norvegicus
ENSODEG00000003984	POP1	100	79.825	ENSRBIG00000007996	POP1	100	79.825	Rhinopithecus_bieti
ENSODEG00000003984	POP1	100	80.019	ENSRROG00000012334	POP1	100	80.019	Rhinopithecus_roxellana
ENSODEG00000003984	POP1	99	79.586	ENSSBOG00000020830	POP1	100	79.586	Saimiri_boliviensis_boliviensis
ENSODEG00000003984	POP1	100	66.990	ENSSHAG00000000296	POP1	100	66.990	Sarcophilus_harrisii
ENSODEG00000003984	POP1	100	47.843	ENSSFOG00015007429	pop1	99	47.323	Scleropages_formosus
ENSODEG00000003984	POP1	86	52.061	ENSSMAG00000010467	POP1	98	47.777	Scophthalmus_maximus
ENSODEG00000003984	POP1	100	46.234	ENSSDUG00000007817	POP1	100	46.509	Seriola_dumerili
ENSODEG00000003984	POP1	100	46.270	ENSSLDG00000012565	POP1	100	46.698	Seriola_lalandi_dorsalis
ENSODEG00000003984	POP1	100	57.478	ENSSPUG00000003550	-	100	57.268	Sphenodon_punctatus
ENSODEG00000003984	POP1	90	49.079	ENSSPAG00000014955	pop1	93	48.850	Stegastes_partitus
ENSODEG00000003984	POP1	100	76.585	ENSSSCG00000006078	POP1	100	76.585	Sus_scrofa
ENSODEG00000003984	POP1	92	55.826	ENSTGUG00000012011	-	100	55.826	Taeniopygia_guttata
ENSODEG00000003984	POP1	95	46.653	ENSTRUG00000010856	pop1	92	47.629	Takifugu_rubripes
ENSODEG00000003984	POP1	92	47.808	ENSTNIG00000013297	pop1	99	47.808	Tetraodon_nigroviridis
ENSODEG00000003984	POP1	95	76.404	ENSTBEG00000014214	POP1	100	76.404	Tupaia_belangeri
ENSODEG00000003984	POP1	100	75.828	ENSTTRG00000016071	POP1	100	75.828	Tursiops_truncatus
ENSODEG00000003984	POP1	99	75.641	ENSUAMG00000017309	POP1	100	75.740	Ursus_americanus
ENSODEG00000003984	POP1	91	88.259	ENSUMAG00000016952	POP1	100	88.259	Ursus_maritimus
ENSODEG00000003984	POP1	82	87.912	ENSVPAG00000008278	POP1	82	87.912	Vicugna_pacos
ENSODEG00000003984	POP1	100	78.460	ENSVVUG00000010994	POP1	100	78.460	Vulpes_vulpes
ENSODEG00000003984	POP1	100	42.456	ENSXCOG00000017043	POP1	100	42.389	Xiphophorus_couchianus
ENSODEG00000003984	POP1	100	46.169	ENSXMAG00000002472	POP1	100	46.169	Xiphophorus_maculatus