EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004012 (Gene tree)
Gene ID: -
Gene Symbol: PTRH1
Alias: -
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2445 bases
Position: chrJH651653.1:2457005-2459449
Accession: 101587111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005308	Pept_tRNA_hydro	PF01195.19	4.9e-40	1	1
ENSODEP00000005309	Pept_tRNA_hydro	PF01195.19	5.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005406	PTRH1-202	645	XM_004641616	ENSODEP00000005309	214 (aa)	XP_004641673	UPI0003336F27
ENSODET00000005405	PTRH1-201	636	-	ENSODEP00000005308	211 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004012	PTRH1	99	84.762	ENSG00000187024	PTRH1	98	85.238	Homo_sapiens
ENSODEG00000004012	PTRH1	90	57.895	ENSAPOG00000003014	-	68	57.895	Acanthochromis_polyacanthus
ENSODEG00000004012	PTRH1	90	57.895	ENSAPOG00000010719	ptrh1	68	57.895	Acanthochromis_polyacanthus
ENSODEG00000004012	PTRH1	90	57.895	ENSAPOG00000000947	PTRH1	68	57.895	Acanthochromis_polyacanthus
ENSODEG00000004012	PTRH1	95	77.941	ENSAMEG00000016791	PTRH1	96	77.941	Ailuropoda_melanoleuca
ENSODEG00000004012	PTRH1	86	56.593	ENSACIG00000006734	ptrh1	78	56.593	Amphilophus_citrinellus
ENSODEG00000004012	PTRH1	90	55.789	ENSAOCG00000009725	ptrh1	68	55.789	Amphiprion_ocellaris
ENSODEG00000004012	PTRH1	90	55.789	ENSAPEG00000020993	ptrh1	68	55.789	Amphiprion_percula
ENSODEG00000004012	PTRH1	86	57.459	ENSATEG00000010003	ptrh1	65	57.459	Anabas_testudineus
ENSODEG00000004012	PTRH1	99	81.731	ENSANAG00000025547	PTRH1	97	81.731	Aotus_nancymaae
ENSODEG00000004012	PTRH1	81	60.000	ENSACLG00000025462	ptrh1	75	57.368	Astatotilapia_calliptera
ENSODEG00000004012	PTRH1	89	55.080	ENSAMXG00000034117	ptrh1	70	55.080	Astyanax_mexicanus
ENSODEG00000004012	PTRH1	80	77.348	ENSBTAG00000012736	PTRH1	64	77.348	Bos_taurus
ENSODEG00000004012	PTRH1	94	84.848	ENSCJAG00000019841	PTRH1	83	80.519	Callithrix_jacchus
ENSODEG00000004012	PTRH1	93	83.920	ENSCAFG00000020123	PTRH1	93	83.920	Canis_familiaris
ENSODEG00000004012	PTRH1	93	84.343	ENSCAFG00020015776	PTRH1	89	84.343	Canis_lupus_dingo
ENSODEG00000004012	PTRH1	100	82.710	ENSCHIG00000008188	PTRH1	100	82.710	Capra_hircus
ENSODEG00000004012	PTRH1	65	94.203	ENSCAPG00000015926	PTRH1	99	94.203	Cavia_aperea
ENSODEG00000004012	PTRH1	99	89.671	ENSCPOG00000023968	PTRH1	99	89.671	Cavia_porcellus
ENSODEG00000004012	PTRH1	98	84.762	ENSCCAG00000023134	PTRH1	98	84.762	Cebus_capucinus
ENSODEG00000004012	PTRH1	99	85.238	ENSCATG00000042852	PTRH1	98	85.238	Cercocebus_atys
ENSODEG00000004012	PTRH1	100	91.589	ENSCLAG00000011155	PTRH1	100	91.589	Chinchilla_lanigera
ENSODEG00000004012	PTRH1	99	85.238	ENSCSAG00000013748	PTRH1	92	85.238	Chlorocebus_sabaeus
ENSODEG00000004012	PTRH1	78	59.394	ENSCPBG00000025207	PTRH1	94	59.394	Chrysemys_picta_bellii
ENSODEG00000004012	PTRH1	96	87.317	ENSCANG00000039856	PTRH1	95	87.317	Colobus_angolensis_palliatus
ENSODEG00000004012	PTRH1	93	83.333	ENSCGRG00001013108	Ptrh1	97	83.333	Cricetulus_griseus_chok1gshd
ENSODEG00000004012	PTRH1	86	85.635	ENSCGRG00000016553	Ptrh1	99	85.635	Cricetulus_griseus_crigri
ENSODEG00000004012	PTRH1	85	55.307	ENSCSEG00000010332	ptrh1	65	55.307	Cynoglossus_semilaevis
ENSODEG00000004012	PTRH1	52	58.716	ENSCVAG00000003873	-	80	58.716	Cyprinodon_variegatus
ENSODEG00000004012	PTRH1	83	57.062	ENSCVAG00000010701	ptrh1	74	53.266	Cyprinodon_variegatus
ENSODEG00000004012	PTRH1	88	52.432	ENSDARG00000098206	ptrh1	80	52.717	Danio_rerio
ENSODEG00000004012	PTRH1	97	84.314	ENSDNOG00000024194	PTRH1	96	84.951	Dasypus_novemcinctus
ENSODEG00000004012	PTRH1	100	85.116	ENSDORG00000013321	Ptrh1	100	85.116	Dipodomys_ordii
ENSODEG00000004012	PTRH1	100	83.333	ENSEASG00005020466	PTRH1	100	83.333	Equus_asinus_asinus
ENSODEG00000004012	PTRH1	100	84.259	ENSECAG00000007615	PTRH1	79	84.259	Equus_caballus
ENSODEG00000004012	PTRH1	87	55.978	ENSELUG00000015467	ptrh1	69	55.978	Esox_lucius
ENSODEG00000004012	PTRH1	94	80.597	ENSFCAG00000001483	PTRH1	93	80.597	Felis_catus
ENSODEG00000004012	PTRH1	86	54.688	ENSFALG00000001352	PTRH1	91	54.688	Ficedula_albicollis
ENSODEG00000004012	PTRH1	93	84.184	ENSFDAG00000020077	PTRH1	98	83.920	Fukomys_damarensis
ENSODEG00000004012	PTRH1	97	54.589	ENSFHEG00000010590	ptrh1	77	54.589	Fundulus_heteroclitus
ENSODEG00000004012	PTRH1	64	51.111	ENSGMOG00000009801	PTRH1	91	51.111	Gadus_morhua
ENSODEG00000004012	PTRH1	95	53.500	ENSGAFG00000016215	ptrh1	84	53.500	Gambusia_affinis
ENSODEG00000004012	PTRH1	83	58.286	ENSGACG00000014682	ptrh1	96	56.757	Gasterosteus_aculeatus
ENSODEG00000004012	PTRH1	96	59.606	ENSGAGG00000022860	PTRH1	89	60.500	Gopherus_agassizii
ENSODEG00000004012	PTRH1	99	84.762	ENSGGOG00000011033	PTRH1	98	85.238	Gorilla_gorilla
ENSODEG00000004012	PTRH1	81	59.412	ENSHBUG00000020824	ptrh1	69	56.995	Haplochromis_burtoni
ENSODEG00000004012	PTRH1	95	85.784	ENSHGLG00000019147	PTRH1	100	85.784	Heterocephalus_glaber_female
ENSODEG00000004012	PTRH1	93	82.828	ENSHGLG00100003681	PTRH1	100	82.828	Heterocephalus_glaber_male
ENSODEG00000004012	PTRH1	85	56.425	ENSHCOG00000014772	ptrh1	71	54.595	Hippocampus_comes
ENSODEG00000004012	PTRH1	88	56.757	ENSIPUG00000015364	ptrh1	72	57.065	Ictalurus_punctatus
ENSODEG00000004012	PTRH1	100	86.449	ENSSTOG00000008942	PTRH1	100	86.449	Ictidomys_tridecemlineatus
ENSODEG00000004012	PTRH1	100	86.449	ENSJJAG00000014338	Ptrh1	97	90.000	Jaculus_jaculus
ENSODEG00000004012	PTRH1	86	58.564	ENSKMAG00000003253	ptrh1	66	58.564	Kryptolebias_marmoratus
ENSODEG00000004012	PTRH1	75	50.314	ENSLBEG00000028842	ptrh1	86	50.314	Labrus_bergylta
ENSODEG00000004012	PTRH1	90	56.085	ENSLACG00000016741	PTRH1	78	56.085	Latimeria_chalumnae
ENSODEG00000004012	PTRH1	91	82.564	ENSLAFG00000021934	PTRH1	96	82.564	Loxodonta_africana
ENSODEG00000004012	PTRH1	99	85.238	ENSMFAG00000001700	PTRH1	98	85.238	Macaca_fascicularis
ENSODEG00000004012	PTRH1	99	85.238	ENSMMUG00000016424	PTRH1	98	85.238	Macaca_mulatta
ENSODEG00000004012	PTRH1	99	85.238	ENSMNEG00000033061	PTRH1	92	85.238	Macaca_nemestrina
ENSODEG00000004012	PTRH1	51	86.111	ENSMLEG00000042412	-	100	86.111	Mandrillus_leucophaeus
ENSODEG00000004012	PTRH1	81	59.064	ENSMAMG00000017386	ptrh1	70	57.368	Mastacembelus_armatus
ENSODEG00000004012	PTRH1	81	60.000	ENSMZEG00005020001	ptrh1	76	57.513	Maylandia_zebra
ENSODEG00000004012	PTRH1	93	82.323	ENSMAUG00000006266	Ptrh1	97	82.323	Mesocricetus_auratus
ENSODEG00000004012	PTRH1	99	86.854	ENSMICG00000005611	PTRH1	99	86.854	Microcebus_murinus
ENSODEG00000004012	PTRH1	93	84.343	ENSMOCG00000013992	Ptrh1	97	84.343	Microtus_ochrogaster
ENSODEG00000004012	PTRH1	83	59.091	ENSMMOG00000014747	ptrh1	67	56.316	Mola_mola
ENSODEG00000004012	PTRH1	95	69.458	ENSMODG00000005503	PTRH1	92	69.458	Monodelphis_domestica
ENSODEG00000004012	PTRH1	64	57.037	ENSMALG00000005392	ptrh1	79	57.037	Monopterus_albus
ENSODEG00000004012	PTRH1	93	83.838	MGP_CAROLIEiJ_G0023450	Ptrh1	99	82.587	Mus_caroli
ENSODEG00000004012	PTRH1	93	83.838	ENSMUSG00000053746	Ptrh1	99	82.587	Mus_musculus
ENSODEG00000004012	PTRH1	93	83.838	MGP_PahariEiJ_G0024907	Ptrh1	99	82.587	Mus_pahari
ENSODEG00000004012	PTRH1	93	83.838	MGP_SPRETEiJ_G0024367	Ptrh1	99	82.587	Mus_spretus
ENSODEG00000004012	PTRH1	93	79.104	ENSMPUG00000013790	PTRH1	93	79.104	Mustela_putorius_furo
ENSODEG00000004012	PTRH1	98	78.733	ENSMLUG00000013454	PTRH1	100	78.733	Myotis_lucifugus
ENSODEG00000004012	PTRH1	99	85.167	ENSNGAG00000014008	Ptrh1	98	88.000	Nannospalax_galili
ENSODEG00000004012	PTRH1	81	60.000	ENSNBRG00000015590	ptrh1	69	57.513	Neolamprologus_brichardi
ENSODEG00000004012	PTRH1	99	84.762	ENSNLEG00000017468	PTRH1	98	85.238	Nomascus_leucogenys
ENSODEG00000004012	PTRH1	90	49.741	ENSMEUG00000009694	-	95	49.741	Notamacropus_eugenii
ENSODEG00000004012	PTRH1	81	58.824	ENSONIG00000013912	ptrh1	82	53.991	Oreochromis_niloticus
ENSODEG00000004012	PTRH1	89	70.053	ENSOANG00000011891	PTRH1	90	65.686	Ornithorhynchus_anatinus
ENSODEG00000004012	PTRH1	100	83.486	ENSOCUG00000006894	PTRH1	94	83.486	Oryctolagus_cuniculus
ENSODEG00000004012	PTRH1	95	87.745	ENSOGAG00000008094	PTRH1	97	87.745	Otolemur_garnettii
ENSODEG00000004012	PTRH1	98	72.398	ENSOARG00000011808	PTRH1	100	72.398	Ovis_aries
ENSODEG00000004012	PTRH1	99	84.762	ENSPPAG00000041782	PTRH1	98	85.238	Pan_paniscus
ENSODEG00000004012	PTRH1	94	81.188	ENSPPRG00000007889	PTRH1	94	81.188	Panthera_pardus
ENSODEG00000004012	PTRH1	57	81.667	ENSPTIG00000021082	-	94	81.667	Panthera_tigris_altaica
ENSODEG00000004012	PTRH1	99	84.762	ENSPTRG00000021394	PTRH1	98	85.238	Pan_troglodytes
ENSODEG00000004012	PTRH1	99	74.178	ENSPANG00000031755	PTRH1	98	74.178	Papio_anubis
ENSODEG00000004012	PTRH1	90	53.684	ENSPKIG00000005449	ptrh1	63	53.684	Paramormyrops_kingsleyae
ENSODEG00000004012	PTRH1	99	57.416	ENSPSIG00000013828	PTRH1	76	57.416	Pelodiscus_sinensis
ENSODEG00000004012	PTRH1	82	53.179	ENSPMGG00000002148	ptrh1	70	50.769	Periophthalmus_magnuspinnatus
ENSODEG00000004012	PTRH1	93	83.333	ENSPEMG00000014360	Ptrh1	97	83.333	Peromyscus_maniculatus_bairdii
ENSODEG00000004012	PTRH1	91	55.729	ENSPFOG00000003715	ptrh1	72	55.729	Poecilia_formosa
ENSODEG00000004012	PTRH1	97	51.185	ENSPLAG00000023354	ptrh1	84	51.185	Poecilia_latipinna
ENSODEG00000004012	PTRH1	91	55.729	ENSPMEG00000000447	ptrh1	72	55.729	Poecilia_mexicana
ENSODEG00000004012	PTRH1	91	55.729	ENSPREG00000012612	ptrh1	72	55.729	Poecilia_reticulata
ENSODEG00000004012	PTRH1	99	80.952	ENSPPYG00000019628	PTRH1	92	81.429	Pongo_abelii
ENSODEG00000004012	PTRH1	93	87.129	ENSPCAG00000007016	PTRH1	94	87.129	Procavia_capensis
ENSODEG00000004012	PTRH1	99	87.442	ENSPCOG00000014541	PTRH1	99	87.442	Propithecus_coquereli
ENSODEG00000004012	PTRH1	99	85.446	ENSPVAG00000000954	PTRH1	99	85.446	Pteropus_vampyrus
ENSODEG00000004012	PTRH1	81	59.412	ENSPNYG00000007789	ptrh1	69	56.995	Pundamilia_nyererei
ENSODEG00000004012	PTRH1	89	57.219	ENSPNAG00000029930	ptrh1	71	57.219	Pygocentrus_nattereri
ENSODEG00000004012	PTRH1	94	81.095	ENSRNOG00000049034	Ptrh1	99	81.095	Rattus_norvegicus
ENSODEG00000004012	PTRH1	96	87.805	ENSRBIG00000027290	PTRH1	95	87.805	Rhinopithecus_bieti
ENSODEG00000004012	PTRH1	96	87.805	ENSRROG00000028799	PTRH1	89	87.805	Rhinopithecus_roxellana
ENSODEG00000004012	PTRH1	75	33.136	YHR189W	PTH1	88	33.136	Saccharomyces_cerevisiae
ENSODEG00000004012	PTRH1	99	85.096	ENSSBOG00000026699	PTRH1	91	85.096	Saimiri_boliviensis_boliviensis
ENSODEG00000004012	PTRH1	93	66.010	ENSSHAG00000018238	PTRH1	97	66.010	Sarcophilus_harrisii
ENSODEG00000004012	PTRH1	87	56.284	ENSSFOG00015007053	ptrh1	93	56.915	Scleropages_formosus
ENSODEG00000004012	PTRH1	85	55.676	ENSSMAG00000016747	ptrh1	78	55.676	Scophthalmus_maximus
ENSODEG00000004012	PTRH1	81	60.588	ENSSDUG00000013471	ptrh1	94	56.571	Seriola_dumerili
ENSODEG00000004012	PTRH1	76	59.006	ENSSLDG00000024662	ptrh1	81	56.522	Seriola_lalandi_dorsalis
ENSODEG00000004012	PTRH1	95	57.143	ENSSPUG00000000040	PTRH1	88	57.143	Sphenodon_punctatus
ENSODEG00000004012	PTRH1	90	57.895	ENSSPAG00000003298	ptrh1	90	58.242	Stegastes_partitus
ENSODEG00000004012	PTRH1	96	86.341	ENSSSCG00000005615	PTRH1	95	86.341	Sus_scrofa
ENSODEG00000004012	PTRH1	64	67.164	ENSTGUG00000003648	PTRH1	100	67.164	Taeniopygia_guttata
ENSODEG00000004012	PTRH1	81	57.647	ENSTRUG00000019801	PTRH1	70	56.021	Takifugu_rubripes
ENSODEG00000004012	PTRH1	83	59.091	ENSTNIG00000016735	ptrh1	78	59.091	Tetraodon_nigroviridis
ENSODEG00000004012	PTRH1	64	92.708	ENSTBEG00000001921	-	63	92.708	Tupaia_belangeri
ENSODEG00000004012	PTRH1	100	79.147	ENSTTRG00000016458	PTRH1	98	79.147	Tursiops_truncatus
ENSODEG00000004012	PTRH1	95	81.863	ENSUAMG00000023948	-	91	81.863	Ursus_americanus
ENSODEG00000004012	PTRH1	86	65.385	ENSVPAG00000001805	PTRH1	100	65.385	Vicugna_pacos
ENSODEG00000004012	PTRH1	98	81.905	ENSVVUG00000013198	PTRH1	95	81.905	Vulpes_vulpes
ENSODEG00000004012	PTRH1	87	54.645	ENSXETG00000009980	ptrh1	98	54.645	Xenopus_tropicalis
ENSODEG00000004012	PTRH1	93	53.571	ENSXCOG00000011498	ptrh1	85	53.500	Xiphophorus_couchianus
ENSODEG00000004012	PTRH1	91	54.688	ENSXMAG00000009256	ptrh1	72	54.688	Xiphophorus_maculatus