EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004099 (Gene tree)
Gene ID: 101592007
Gene Symbol: LSM14B
Alias: -
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 9652 bases
Position: chrJH651709.1:2005430-2015081
Accession: 101592007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005424	FDF	PF09532.10	2.6e-25	1	1
ENSODEP00000005423	FDF	PF09532.10	4e-25	1	1
ENSODEP00000005423	SM-ATX	PF14438.6	5.4e-08	1	1
ENSODEP00000005423	LSM14	PF12701.7	7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005520	LSM14B-201	1309	XM_004644176	ENSODEP00000005423	385 (aa)	XP_004644233	UPI0003339260
ENSODET00000005521	LSM14B-202	918	-	ENSODEP00000005424	305 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004099	LSM14B	90	48.118	ENSODEG00000008825	-	91	47.236
ENSODEG00000004099	LSM14B	91	49.409	ENSODEG00000014352	-	86	49.755

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004099	LSM14B	100	95.844	ENSG00000149657	LSM14B	100	95.844	Homo_sapiens
ENSODEG00000004099	LSM14B	90	55.495	ENSAPOG00000001780	lsm14b	92	55.827	Acanthochromis_polyacanthus
ENSODEG00000004099	LSM14B	100	93.443	ENSAMEG00000013430	LSM14B	100	84.634	Ailuropoda_melanoleuca
ENSODEG00000004099	LSM14B	90	36.918	ENSACIG00000003147	LSM14B	88	43.038	Amphilophus_citrinellus
ENSODEG00000004099	LSM14B	90	52.841	ENSACIG00000012266	lsm14b	91	52.044	Amphilophus_citrinellus
ENSODEG00000004099	LSM14B	90	56.077	ENSAOCG00000012380	lsm14b	92	56.403	Amphiprion_ocellaris
ENSODEG00000004099	LSM14B	98	48.329	ENSAOCG00000006667	LSM14B	90	49.300	Amphiprion_ocellaris
ENSODEG00000004099	LSM14B	90	48.387	ENSAPEG00000023633	lsm14b	92	51.220	Amphiprion_percula
ENSODEG00000004099	LSM14B	97	40.667	ENSATEG00000015895	LSM14B	89	41.837	Anabas_testudineus
ENSODEG00000004099	LSM14B	90	53.168	ENSATEG00000016603	lsm14b	92	53.719	Anabas_testudineus
ENSODEG00000004099	LSM14B	100	82.736	ENSAPLG00000013203	LSM14B	100	75.510	Anas_platyrhynchos
ENSODEG00000004099	LSM14B	99	81.299	ENSACAG00000016195	LSM14B	99	81.299	Anolis_carolinensis
ENSODEG00000004099	LSM14B	100	95.065	ENSANAG00000037915	LSM14B	100	95.065	Aotus_nancymaae
ENSODEG00000004099	LSM14B	53	50.000	ENSACLG00000019624	-	78	39.916	Astatotilapia_calliptera
ENSODEG00000004099	LSM14B	53	47.590	ENSACLG00000011955	-	77	38.235	Astatotilapia_calliptera
ENSODEG00000004099	LSM14B	89	50.546	ENSACLG00000019663	lsm14b	92	54.121	Astatotilapia_calliptera
ENSODEG00000004099	LSM14B	99	61.425	ENSAMXG00000002865	lsm14b	99	62.155	Astyanax_mexicanus
ENSODEG00000004099	LSM14B	100	90.164	ENSBTAG00000021558	LSM14B	100	83.491	Bos_taurus
ENSODEG00000004099	LSM14B	100	96.104	ENSCJAG00000014434	LSM14B	100	96.104	Callithrix_jacchus
ENSODEG00000004099	LSM14B	100	92.459	ENSCAFG00000012518	LSM14B	98	83.594	Canis_familiaris
ENSODEG00000004099	LSM14B	100	94.026	ENSCAFG00020022150	LSM14B	100	94.026	Canis_lupus_dingo
ENSODEG00000004099	LSM14B	100	93.506	ENSCHIG00000010284	-	100	93.506	Capra_hircus
ENSODEG00000004099	LSM14B	99	68.421	ENSCHIG00000022681	-	100	68.421	Capra_hircus
ENSODEG00000004099	LSM14B	89	94.737	ENSTSYG00000031914	LSM14B	89	94.737	Carlito_syrichta
ENSODEG00000004099	LSM14B	100	96.393	ENSCAPG00000013059	LSM14B	100	96.793	Cavia_aperea
ENSODEG00000004099	LSM14B	100	96.721	ENSCPOG00000038080	LSM14B	100	97.076	Cavia_porcellus
ENSODEG00000004099	LSM14B	100	95.584	ENSCCAG00000021267	LSM14B	100	95.584	Cebus_capucinus
ENSODEG00000004099	LSM14B	99	78.247	ENSCCAG00000024900	-	99	78.247	Cebus_capucinus
ENSODEG00000004099	LSM14B	100	96.104	ENSCATG00000036006	LSM14B	100	96.104	Cercocebus_atys
ENSODEG00000004099	LSM14B	100	96.393	ENSCLAG00000003186	LSM14B	100	96.784	Chinchilla_lanigera
ENSODEG00000004099	LSM14B	100	93.770	ENSCSAG00000015729	LSM14B	100	87.028	Chlorocebus_sabaeus
ENSODEG00000004099	LSM14B	70	96.667	ENSCHOG00000006997	-	100	64.356	Choloepus_hoffmanni
ENSODEG00000004099	LSM14B	100	82.085	ENSCPBG00000027065	LSM14B	99	77.778	Chrysemys_picta_bellii
ENSODEG00000004099	LSM14B	89	95.322	ENSCANG00000036986	LSM14B	100	95.322	Colobus_angolensis_palliatus
ENSODEG00000004099	LSM14B	100	95.844	ENSCGRG00001018399	Lsm14b	100	95.844	Cricetulus_griseus_chok1gshd
ENSODEG00000004099	LSM14B	98	94.631	ENSCGRG00000006111	-	100	94.631	Cricetulus_griseus_crigri
ENSODEG00000004099	LSM14B	80	83.951	ENSCGRG00000002484	-	100	81.893	Cricetulus_griseus_crigri
ENSODEG00000004099	LSM14B	95	47.938	ENSCSEG00000020669	LSM14B	92	47.200	Cynoglossus_semilaevis
ENSODEG00000004099	LSM14B	91	52.778	ENSCSEG00000004722	lsm14b	93	53.297	Cynoglossus_semilaevis
ENSODEG00000004099	LSM14B	95	32.203	ENSCVAG00000012433	-	88	35.983	Cyprinodon_variegatus
ENSODEG00000004099	LSM14B	99	55.128	ENSDARG00000025386	lsm14b	99	54.937	Danio_rerio
ENSODEG00000004099	LSM14B	100	89.508	ENSDNOG00000025246	LSM14B	100	89.508	Dasypus_novemcinctus
ENSODEG00000004099	LSM14B	100	92.787	ENSDORG00000016683	Lsm14b	100	92.787	Dipodomys_ordii
ENSODEG00000004099	LSM14B	81	70.968	ENSETEG00000011188	-	100	84.848	Echinops_telfairi
ENSODEG00000004099	LSM14B	99	74.545	ENSETEG00000001869	-	100	73.247	Echinops_telfairi
ENSODEG00000004099	LSM14B	100	92.131	ENSEASG00005023218	LSM14B	100	92.131	Equus_asinus_asinus
ENSODEG00000004099	LSM14B	100	94.026	ENSECAG00000010659	LSM14B	100	94.026	Equus_caballus
ENSODEG00000004099	LSM14B	74	75.439	ENSEEUG00000007331	LSM14B	100	75.439	Erinaceus_europaeus
ENSODEG00000004099	LSM14B	100	53.299	ENSELUG00000016299	LSM14B	99	53.197	Esox_lucius
ENSODEG00000004099	LSM14B	96	59.788	ENSELUG00000005780	lsm14b	92	60.615	Esox_lucius
ENSODEG00000004099	LSM14B	100	94.805	ENSFCAG00000003248	LSM14B	100	94.805	Felis_catus
ENSODEG00000004099	LSM14B	100	83.766	ENSFALG00000010618	LSM14B	100	77.003	Ficedula_albicollis
ENSODEG00000004099	LSM14B	100	96.721	ENSFDAG00000002214	LSM14B	100	97.076	Fukomys_damarensis
ENSODEG00000004099	LSM14B	74	42.320	ENSFHEG00000003362	LSM14B	76	46.557	Fundulus_heteroclitus
ENSODEG00000004099	LSM14B	100	50.505	ENSFHEG00000006237	lsm14b	100	50.251	Fundulus_heteroclitus
ENSODEG00000004099	LSM14B	100	52.591	ENSGMOG00000017115	lsm14b	91	52.260	Gadus_morhua
ENSODEG00000004099	LSM14B	99	85.052	ENSGALG00000005125	LSM14B	99	86.082	Gallus_gallus
ENSODEG00000004099	LSM14B	96	34.812	ENSGAFG00000013723	LSM14B	87	39.316	Gambusia_affinis
ENSODEG00000004099	LSM14B	90	48.199	ENSGAFG00000020318	lsm14b	92	48.634	Gambusia_affinis
ENSODEG00000004099	LSM14B	91	54.520	ENSGACG00000009973	lsm14b	92	54.520	Gasterosteus_aculeatus
ENSODEG00000004099	LSM14B	93	70.775	ENSGAGG00000004106	LSM14B	94	80.816	Gopherus_agassizii
ENSODEG00000004099	LSM14B	100	93.770	ENSGGOG00000005630	LSM14B	100	93.770	Gorilla_gorilla
ENSODEG00000004099	LSM14B	100	98.182	ENSHGLG00000015055	LSM14B	100	98.182	Heterocephalus_glaber_female
ENSODEG00000004099	LSM14B	99	97.682	ENSHGLG00100015273	LSM14B	100	97.682	Heterocephalus_glaber_male
ENSODEG00000004099	LSM14B	95	49.610	ENSHCOG00000018747	LSM14B	92	49.864	Hippocampus_comes
ENSODEG00000004099	LSM14B	88	37.918	ENSHCOG00000004867	lsm14b	86	41.702	Hippocampus_comes
ENSODEG00000004099	LSM14B	90	61.190	ENSIPUG00000014946	lsm14b	87	61.453	Ictalurus_punctatus
ENSODEG00000004099	LSM14B	100	97.705	ENSSTOG00000020482	LSM14B	100	97.953	Ictidomys_tridecemlineatus
ENSODEG00000004099	LSM14B	99	95.000	ENSJJAG00000012728	Lsm14b	99	95.000	Jaculus_jaculus
ENSODEG00000004099	LSM14B	65	43.333	ENSKMAG00000012834	-	88	43.541	Kryptolebias_marmoratus
ENSODEG00000004099	LSM14B	90	52.210	ENSKMAG00000017524	lsm14b	93	52.589	Kryptolebias_marmoratus
ENSODEG00000004099	LSM14B	69	40.977	ENSLBEG00000007951	LSM14B	86	41.453	Labrus_bergylta
ENSODEG00000004099	LSM14B	100	68.285	ENSLACG00000003849	LSM14B	99	68.471	Latimeria_chalumnae
ENSODEG00000004099	LSM14B	99	62.821	ENSLOCG00000003746	lsm14b	99	62.821	Lepisosteus_oculatus
ENSODEG00000004099	LSM14B	90	89.595	ENSLAFG00000007492	LSM14B	100	89.595	Loxodonta_africana
ENSODEG00000004099	LSM14B	100	96.104	ENSMFAG00000041479	LSM14B	100	96.104	Macaca_fascicularis
ENSODEG00000004099	LSM14B	100	96.104	ENSMMUG00000014084	LSM14B	100	96.104	Macaca_mulatta
ENSODEG00000004099	LSM14B	100	96.104	ENSMNEG00000045573	LSM14B	100	96.104	Macaca_nemestrina
ENSODEG00000004099	LSM14B	89	95.614	ENSMLEG00000040895	LSM14B	100	95.614	Mandrillus_leucophaeus
ENSODEG00000004099	LSM14B	99	50.256	ENSMAMG00000024124	LSM14B	91	51.397	Mastacembelus_armatus
ENSODEG00000004099	LSM14B	90	53.039	ENSMAMG00000020539	lsm14b	92	54.223	Mastacembelus_armatus
ENSODEG00000004099	LSM14B	89	50.273	ENSMZEG00005000987	lsm14b	92	53.846	Maylandia_zebra
ENSODEG00000004099	LSM14B	91	48.404	ENSMZEG00005026001	LSM14B	94	49.459	Maylandia_zebra
ENSODEG00000004099	LSM14B	91	80.899	ENSMGAG00000005300	LSM14B	100	82.022	Meleagris_gallopavo
ENSODEG00000004099	LSM14B	100	94.545	ENSMAUG00000020700	Lsm14b	100	94.545	Mesocricetus_auratus
ENSODEG00000004099	LSM14B	100	96.364	ENSMICG00000014675	LSM14B	100	96.364	Microcebus_murinus
ENSODEG00000004099	LSM14B	90	78.909	ENSMOCG00000005119	-	93	78.755	Microtus_ochrogaster
ENSODEG00000004099	LSM14B	100	95.065	ENSMOCG00000020600	Lsm14b	100	95.065	Microtus_ochrogaster
ENSODEG00000004099	LSM14B	91	50.997	ENSMMOG00000017321	LSM14B	91	50.997	Mola_mola
ENSODEG00000004099	LSM14B	90	53.107	ENSMMOG00000020042	lsm14b	95	53.333	Mola_mola
ENSODEG00000004099	LSM14B	100	86.885	ENSMODG00000016690	LSM14B	100	86.885	Monodelphis_domestica
ENSODEG00000004099	LSM14B	92	50.409	ENSMALG00000022251	LSM14B	92	50.275	Monopterus_albus
ENSODEG00000004099	LSM14B	94	53.168	ENSMALG00000004783	lsm14b	92	53.143	Monopterus_albus
ENSODEG00000004099	LSM14B	100	94.545	MGP_CAROLIEiJ_G0024770	Lsm14b	100	94.545	Mus_caroli
ENSODEG00000004099	LSM14B	100	94.805	ENSMUSG00000039108	Lsm14b	100	94.805	Mus_musculus
ENSODEG00000004099	LSM14B	100	94.805	MGP_PahariEiJ_G0026214	Lsm14b	100	94.805	Mus_pahari
ENSODEG00000004099	LSM14B	100	94.805	MGP_SPRETEiJ_G0025693	Lsm14b	100	94.805	Mus_spretus
ENSODEG00000004099	LSM14B	100	92.131	ENSMPUG00000007584	LSM14B	100	79.901	Mustela_putorius_furo
ENSODEG00000004099	LSM14B	100	91.969	ENSMLUG00000000304	LSM14B	100	91.969	Myotis_lucifugus
ENSODEG00000004099	LSM14B	75	91.342	ENSNGAG00000016550	Lsm14b	100	91.342	Nannospalax_galili
ENSODEG00000004099	LSM14B	89	95.029	ENSNLEG00000015757	LSM14B	100	95.029	Nomascus_leucogenys
ENSODEG00000004099	LSM14B	77	97.887	ENSMEUG00000008267	-	76	97.887	Notamacropus_eugenii
ENSODEG00000004099	LSM14B	63	57.025	ENSMEUG00000006305	-	99	59.917	Notamacropus_eugenii
ENSODEG00000004099	LSM14B	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSODEG00000004099	LSM14B	89	54.396	ENSONIG00000020318	lsm14b	92	56.044	Oreochromis_niloticus
ENSODEG00000004099	LSM14B	72	83.453	ENSOANG00000003370	LSM14B	99	83.279	Ornithorhynchus_anatinus
ENSODEG00000004099	LSM14B	89	90.698	ENSOCUG00000006279	LSM14B	100	90.698	Oryctolagus_cuniculus
ENSODEG00000004099	LSM14B	92	45.799	ENSORLG00000028353	LSM14B	91	44.475	Oryzias_latipes
ENSODEG00000004099	LSM14B	90	51.532	ENSORLG00000013525	lsm14b	92	53.571	Oryzias_latipes
ENSODEG00000004099	LSM14B	91	32.740	ENSORLG00020018191	-	85	35.135	Oryzias_latipes_hni
ENSODEG00000004099	LSM14B	90	51.253	ENSORLG00020020553	lsm14b	92	53.297	Oryzias_latipes_hni
ENSODEG00000004099	LSM14B	90	51.253	ENSORLG00015016862	lsm14b	92	53.297	Oryzias_latipes_hsok
ENSODEG00000004099	LSM14B	92	45.822	ENSORLG00015013157	LSM14B	91	44.505	Oryzias_latipes_hsok
ENSODEG00000004099	LSM14B	64	38.057	ENSOMEG00000000171	-	97	39.080	Oryzias_melastigma
ENSODEG00000004099	LSM14B	90	50.975	ENSOMEG00000023917	lsm14b	92	53.022	Oryzias_melastigma
ENSODEG00000004099	LSM14B	100	93.443	ENSOGAG00000003915	LSM14B	100	86.557	Otolemur_garnettii
ENSODEG00000004099	LSM14B	100	91.803	ENSOARG00000014706	LSM14B	98	82.984	Ovis_aries
ENSODEG00000004099	LSM14B	90	93.966	ENSPPAG00000035799	LSM14B	95	93.966	Pan_paniscus
ENSODEG00000004099	LSM14B	100	94.545	ENSPPRG00000009197	LSM14B	100	94.545	Panthera_pardus
ENSODEG00000004099	LSM14B	97	92.568	ENSPTIG00000021518	LSM14B	100	92.568	Panthera_tigris_altaica
ENSODEG00000004099	LSM14B	100	95.844	ENSPTRG00000013696	LSM14B	100	95.844	Pan_troglodytes
ENSODEG00000004099	LSM14B	100	96.364	ENSPANG00000011747	LSM14B	100	96.364	Papio_anubis
ENSODEG00000004099	LSM14B	99	62.141	ENSPKIG00000003275	lsm14b	94	84.158	Paramormyrops_kingsleyae
ENSODEG00000004099	LSM14B	100	81.373	ENSPSIG00000014762	LSM14B	100	84.104	Pelodiscus_sinensis
ENSODEG00000004099	LSM14B	99	95.276	ENSPEMG00000017688	Lsm14b	100	95.276	Peromyscus_maniculatus_bairdii
ENSODEG00000004099	LSM14B	100	90.130	ENSPCIG00000013405	LSM14B	100	90.130	Phascolarctos_cinereus
ENSODEG00000004099	LSM14B	100	51.134	ENSPFOG00000005631	lsm14b	92	51.507	Poecilia_formosa
ENSODEG00000004099	LSM14B	100	51.139	ENSPLAG00000002449	lsm14b	92	51.515	Poecilia_latipinna
ENSODEG00000004099	LSM14B	90	48.034	ENSPLAG00000005793	LSM14B	91	48.476	Poecilia_latipinna
ENSODEG00000004099	LSM14B	100	50.633	ENSPMEG00000000745	lsm14b	92	50.964	Poecilia_mexicana
ENSODEG00000004099	LSM14B	89	46.927	ENSPMEG00000022953	LSM14B	91	47.934	Poecilia_mexicana
ENSODEG00000004099	LSM14B	90	38.628	ENSPREG00000007828	LSM14B	87	39.841	Poecilia_reticulata
ENSODEG00000004099	LSM14B	100	79.434	ENSPPYG00000011194	LSM14B	100	75.500	Pongo_abelii
ENSODEG00000004099	LSM14B	100	96.623	ENSPCOG00000013625	LSM14B	100	96.623	Propithecus_coquereli
ENSODEG00000004099	LSM14B	100	71.148	ENSPVAG00000017918	LSM14B	100	70.032	Pteropus_vampyrus
ENSODEG00000004099	LSM14B	99	62.148	ENSPNAG00000012777	lsm14b	99	62.148	Pygocentrus_nattereri
ENSODEG00000004099	LSM14B	100	92.787	ENSRNOG00000054557	Lsm14b	100	85.613	Rattus_norvegicus
ENSODEG00000004099	LSM14B	100	93.770	ENSRBIG00000033461	LSM14B	99	95.044	Rhinopithecus_bieti
ENSODEG00000004099	LSM14B	100	94.098	ENSRROG00000042949	LSM14B	100	94.098	Rhinopithecus_roxellana
ENSODEG00000004099	LSM14B	100	89.097	ENSSBOG00000032820	LSM14B	100	95.322	Saimiri_boliviensis_boliviensis
ENSODEG00000004099	LSM14B	100	87.213	ENSSHAG00000015528	LSM14B	100	87.213	Sarcophilus_harrisii
ENSODEG00000004099	LSM14B	90	61.345	ENSSFOG00015004627	lsm14b	92	62.810	Scleropages_formosus
ENSODEG00000004099	LSM14B	90	54.420	ENSSMAG00000012725	lsm14b	92	54.396	Scophthalmus_maximus
ENSODEG00000004099	LSM14B	97	52.604	ENSSMAG00000000135	LSM14B	92	53.151	Scophthalmus_maximus
ENSODEG00000004099	LSM14B	92	53.552	ENSSDUG00000022770	LSM14B	92	53.444	Seriola_dumerili
ENSODEG00000004099	LSM14B	90	54.918	ENSSDUG00000020977	lsm14b	92	55.526	Seriola_dumerili
ENSODEG00000004099	LSM14B	90	38.380	ENSSLDG00000011354	-	89	44.574	Seriola_lalandi_dorsalis
ENSODEG00000004099	LSM14B	67	82.609	ENSSARG00000007749	-	100	82.609	Sorex_araneus
ENSODEG00000004099	LSM14B	100	80.519	ENSSPUG00000014360	LSM14B	96	81.818	Sphenodon_punctatus
ENSODEG00000004099	LSM14B	90	55.429	ENSSPAG00000020915	lsm14b	92	54.902	Stegastes_partitus
ENSODEG00000004099	LSM14B	95	37.241	ENSSPAG00000018854	-	88	39.676	Stegastes_partitus
ENSODEG00000004099	LSM14B	100	92.468	ENSSSCG00000026052	LSM14B	100	90.820	Sus_scrofa
ENSODEG00000004099	LSM14B	90	84.770	ENSTGUG00000007884	LSM14B	100	84.770	Taeniopygia_guttata
ENSODEG00000004099	LSM14B	92	49.867	ENSTRUG00000001529	LSM14B	92	49.459	Takifugu_rubripes
ENSODEG00000004099	LSM14B	100	51.621	ENSTRUG00000011354	lsm14b	92	52.316	Takifugu_rubripes
ENSODEG00000004099	LSM14B	92	56.198	ENSTNIG00000002445	lsm14b	92	56.198	Tetraodon_nigroviridis
ENSODEG00000004099	LSM14B	71	95.238	ENSTTRG00000011043	LSM14B	100	61.404	Tursiops_truncatus
ENSODEG00000004099	LSM14B	100	93.443	ENSUAMG00000025298	LSM14B	99	87.798	Ursus_americanus
ENSODEG00000004099	LSM14B	100	93.443	ENSUMAG00000000480	LSM14B	99	87.798	Ursus_maritimus
ENSODEG00000004099	LSM14B	100	92.131	ENSVVUG00000015920	LSM14B	100	92.131	Vulpes_vulpes
ENSODEG00000004099	LSM14B	84	75.841	ENSXETG00000001997	lsm14b	99	76.758	Xenopus_tropicalis
ENSODEG00000004099	LSM14B	90	49.176	ENSXMAG00000010013	lsm14b	92	49.593	Xiphophorus_maculatus