EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004150 (Gene tree)
Gene ID: 101571938
Gene Symbol: -
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 39990 bases
Position: chrJH651659.1:134447-174436
Accession: 101571938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005495	MMR_HSR1	PF01926.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005593	-	1130	XM_004641820	ENSODEP00000005495	206 (aa)	XP_004629211	UPI00022B4E46

Gene Model

Click here to download ENSODEG00000004150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004150	-	73	41.290	ENSODEG00000002835	RAB7A	95	41.290
ENSODEG00000004150	-	96	31.818	ENSODEG00000015703	HRAS	95	31.937
ENSODEG00000004150	-	78	40.741	ENSODEG00000019065	-	86	40.741
ENSODEG00000004150	-	93	48.241	ENSODEG00000001343	RAB2B	91	48.241
ENSODEG00000004150	-	87	50.000	ENSODEG00000002369	-	97	46.635
ENSODEG00000004150	-	70	34.899	ENSODEG00000009963	RHEB	78	34.899
ENSODEG00000004150	-	93	40.404	ENSODEG00000017920	RAB5C	89	40.404
ENSODEG00000004150	-	72	38.255	ENSODEG00000015650	-	65	38.255
ENSODEG00000004150	-	83	39.884	ENSODEG00000000520	RAB39B	81	39.884
ENSODEG00000004150	-	80	39.286	ENSODEG00000019004	RAB9A	84	39.286
ENSODEG00000004150	-	81	33.133	ENSODEG00000007937	NRAS	87	33.133
ENSODEG00000004150	-	78	47.531	ENSODEG00000016878	-	75	47.531
ENSODEG00000004150	-	72	45.333	ENSODEG00000011726	RAB33A	63	45.333
ENSODEG00000004150	-	93	38.462	ENSODEG00000003860	RAB5B	90	38.462
ENSODEG00000004150	-	82	43.529	ENSODEG00000009908	RAB25	79	43.529
ENSODEG00000004150	-	82	47.929	ENSODEG00000003833	RAB30	83	47.929
ENSODEG00000004150	-	79	48.780	ENSODEG00000002013	RAB14	76	48.780
ENSODEG00000004150	-	79	34.731	ENSODEG00000007488	DNAJC27	61	34.731
ENSODEG00000004150	-	90	48.421	ENSODEG00000016788	-	94	48.421
ENSODEG00000004150	-	81	36.782	ENSODEG00000002594	-	62	36.782
ENSODEG00000004150	-	94	36.634	ENSODEG00000005942	RAB6A	95	36.634
ENSODEG00000004150	-	81	49.112	ENSODEG00000006414	RAB12	75	49.697
ENSODEG00000004150	-	82	45.562	ENSODEG00000013827	RAB15	79	45.294
ENSODEG00000004150	-	82	35.882	ENSODEG00000018151	MRAS	81	35.882
ENSODEG00000004150	-	81	43.713	ENSODEG00000010443	-	82	43.713
ENSODEG00000004150	-	58	47.059	ENSODEG00000012634	-	93	47.059
ENSODEG00000004150	-	93	45.361	ENSODEG00000017847	-	96	45.361
ENSODEG00000004150	-	72	33.987	ENSODEG00000009994	RERG	74	33.987
ENSODEG00000004150	-	78	47.531	ENSODEG00000011371	RAB11B	74	47.531
ENSODEG00000004150	-	90	45.503	ENSODEG00000011248	-	96	45.312
ENSODEG00000004150	-	84	48.851	ENSODEG00000007219	RAB35	95	46.632
ENSODEG00000004150	-	95	38.776	ENSODEG00000000054	RAB22A	99	38.776
ENSODEG00000004150	-	81	33.133	ENSODEG00000010412	KRAS	87	33.537
ENSODEG00000004150	-	85	33.146	ENSODEG00000009016	RAB36	61	33.146
ENSODEG00000004150	-	62	46.875	ENSODEG00000000290	-	86	46.875
ENSODEG00000004150	-	87	39.674	ENSODEG00000002979	RAB33B	80	39.674
ENSODEG00000004150	-	83	34.884	ENSODEG00000016056	RAB23	72	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004150	-	100	98.544	ENSG00000099246	RAB18	100	98.544	Homo_sapiens
ENSODEG00000004150	-	99	84.390	ENSAPOG00000019881	rab18b	99	84.390	Acanthochromis_polyacanthus
ENSODEG00000004150	-	100	85.169	ENSAMEG00000015990	RAB18	100	85.169	Ailuropoda_melanoleuca
ENSODEG00000004150	-	99	86.341	ENSACIG00000008102	rab18b	99	86.341	Amphilophus_citrinellus
ENSODEG00000004150	-	99	84.390	ENSAOCG00000013479	rab18b	99	84.390	Amphiprion_ocellaris
ENSODEG00000004150	-	99	83.902	ENSAPEG00000022923	rab18b	99	83.902	Amphiprion_percula
ENSODEG00000004150	-	99	83.415	ENSATEG00000002952	rab18b	99	83.415	Anabas_testudineus
ENSODEG00000004150	-	100	98.544	ENSANAG00000035856	RAB18	100	98.544	Aotus_nancymaae
ENSODEG00000004150	-	99	85.366	ENSACLG00000015289	rab18b	99	85.366	Astatotilapia_calliptera
ENSODEG00000004150	-	100	86.893	ENSAMXG00000042073	rab18b	100	86.893	Astyanax_mexicanus
ENSODEG00000004150	-	100	98.058	ENSBTAG00000009871	RAB18	88	98.058	Bos_taurus
ENSODEG00000004150	-	100	95.631	ENSBTAG00000050873	-	100	95.631	Bos_taurus
ENSODEG00000004150	-	100	98.544	ENSCJAG00000045749	RAB18	100	98.544	Callithrix_jacchus
ENSODEG00000004150	-	100	97.573	ENSCAFG00020003253	RAB18	100	97.573	Canis_lupus_dingo
ENSODEG00000004150	-	100	98.058	ENSCHIG00000008749	RAB18	100	98.058	Capra_hircus
ENSODEG00000004150	-	100	98.544	ENSTSYG00000013092	RAB18	100	98.544	Carlito_syrichta
ENSODEG00000004150	-	100	100.000	ENSCPOG00000032827	RAB18	100	100.000	Cavia_porcellus
ENSODEG00000004150	-	100	98.544	ENSCCAG00000006762	RAB18	100	98.544	Cebus_capucinus
ENSODEG00000004150	-	100	98.544	ENSCATG00000009672	RAB18	100	98.544	Cercocebus_atys
ENSODEG00000004150	-	100	98.544	ENSCSAG00000011749	RAB18	100	98.544	Chlorocebus_sabaeus
ENSODEG00000004150	-	100	98.544	ENSCANG00000035397	RAB18	100	98.544	Colobus_angolensis_palliatus
ENSODEG00000004150	-	100	99.515	ENSCGRG00001017519	Rab18	100	99.515	Cricetulus_griseus_chok1gshd
ENSODEG00000004150	-	100	99.515	ENSCGRG00000017201	Rab18	100	99.515	Cricetulus_griseus_crigri
ENSODEG00000004150	-	95	84.615	ENSCSEG00000016803	rab18b	99	84.615	Cynoglossus_semilaevis
ENSODEG00000004150	-	100	87.864	ENSDARG00000098344	rab18b	100	87.864	Danio_rerio
ENSODEG00000004150	-	100	98.544	ENSDNOG00000047713	RAB18	100	98.544	Dasypus_novemcinctus
ENSODEG00000004150	-	62	88.372	ENSDNOG00000038845	-	85	88.372	Dasypus_novemcinctus
ENSODEG00000004150	-	84	91.379	ENSDORG00000029360	-	83	91.379	Dipodomys_ordii
ENSODEG00000004150	-	100	99.029	ENSDORG00000028596	-	100	99.029	Dipodomys_ordii
ENSODEG00000004150	-	100	99.029	ENSEASG00005007164	RAB18	100	99.029	Equus_asinus_asinus
ENSODEG00000004150	-	100	99.029	ENSECAG00000017521	RAB18	88	99.029	Equus_caballus
ENSODEG00000004150	-	99	86.893	ENSELUG00000016450	rab18b	99	86.893	Esox_lucius
ENSODEG00000004150	-	100	97.573	ENSFCAG00000027161	RAB18	100	97.573	Felis_catus
ENSODEG00000004150	-	100	95.652	ENSFALG00000007160	RAB18	100	95.652	Ficedula_albicollis
ENSODEG00000004150	-	99	84.390	ENSFHEG00000020035	rab18b	99	84.390	Fundulus_heteroclitus
ENSODEG00000004150	-	99	79.512	ENSGMOG00000016608	rab18b	99	79.512	Gadus_morhua
ENSODEG00000004150	-	100	97.087	ENSGALG00000007435	RAB18	100	97.087	Gallus_gallus
ENSODEG00000004150	-	99	84.390	ENSGAFG00000008560	rab18b	99	84.390	Gambusia_affinis
ENSODEG00000004150	-	99	83.415	ENSGACG00000016395	rab18b	99	83.415	Gasterosteus_aculeatus
ENSODEG00000004150	-	100	98.544	ENSGGOG00000008086	RAB18	100	98.544	Gorilla_gorilla
ENSODEG00000004150	-	99	85.366	ENSHBUG00000003696	rab18b	99	85.366	Haplochromis_burtoni
ENSODEG00000004150	-	99	81.463	ENSHGLG00000007301	-	95	81.463	Heterocephalus_glaber_female
ENSODEG00000004150	-	100	98.544	ENSHGLG00000004365	RAB18	100	98.544	Heterocephalus_glaber_female
ENSODEG00000004150	-	100	98.544	ENSHGLG00100013089	-	100	98.544	Heterocephalus_glaber_male
ENSODEG00000004150	-	99	81.463	ENSHGLG00100009117	-	95	81.463	Heterocephalus_glaber_male
ENSODEG00000004150	-	99	83.902	ENSHCOG00000002217	rab18b	99	83.902	Hippocampus_comes
ENSODEG00000004150	-	100	84.951	ENSIPUG00000010859	rab18b	100	84.951	Ictalurus_punctatus
ENSODEG00000004150	-	100	100.000	ENSSTOG00000014560	-	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000004150	-	99	84.878	ENSKMAG00000007364	rab18b	99	84.878	Kryptolebias_marmoratus
ENSODEG00000004150	-	99	86.408	ENSLBEG00000019428	rab18b	99	86.408	Labrus_bergylta
ENSODEG00000004150	-	100	79.612	ENSLACG00000011256	rab18b	100	79.612	Latimeria_chalumnae
ENSODEG00000004150	-	100	98.058	ENSLAFG00000015582	RAB18	100	98.058	Loxodonta_africana
ENSODEG00000004150	-	100	98.544	ENSMFAG00000006430	RAB18	100	98.544	Macaca_fascicularis
ENSODEG00000004150	-	100	96.602	ENSMMUG00000046971	RAB18	74	96.602	Macaca_mulatta
ENSODEG00000004150	-	100	98.544	ENSMNEG00000038180	RAB18	100	98.544	Macaca_nemestrina
ENSODEG00000004150	-	100	98.544	ENSMLEG00000033595	RAB18	100	98.544	Mandrillus_leucophaeus
ENSODEG00000004150	-	100	82.524	ENSMAMG00000018445	rab18b	100	82.524	Mastacembelus_armatus
ENSODEG00000004150	-	99	85.366	ENSMZEG00005008244	rab18b	99	85.366	Maylandia_zebra
ENSODEG00000004150	-	97	87.940	ENSMAUG00000020698	-	96	87.940	Mesocricetus_auratus
ENSODEG00000004150	-	100	98.544	ENSMICG00000017280	RAB18	100	98.544	Microcebus_murinus
ENSODEG00000004150	-	100	99.515	ENSMOCG00000013044	Rab18	100	99.515	Microtus_ochrogaster
ENSODEG00000004150	-	99	71.759	ENSMMOG00000017849	rab18b	99	71.759	Mola_mola
ENSODEG00000004150	-	100	97.087	ENSMODG00000008253	RAB18	100	97.087	Monodelphis_domestica
ENSODEG00000004150	-	100	84.466	ENSMODG00000024936	-	100	84.466	Monodelphis_domestica
ENSODEG00000004150	-	99	84.878	ENSMALG00000005069	rab18b	99	84.878	Monopterus_albus
ENSODEG00000004150	-	100	99.029	MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	Mus_caroli
ENSODEG00000004150	-	100	99.029	ENSMUSG00000073639	Rab18	100	99.029	Mus_musculus
ENSODEG00000004150	-	100	99.029	MGP_PahariEiJ_G0018716	Rab18	100	99.029	Mus_pahari
ENSODEG00000004150	-	100	99.029	MGP_SPRETEiJ_G0022894	Rab18	100	99.029	Mus_spretus
ENSODEG00000004150	-	100	97.573	ENSMPUG00000010592	RAB18	100	97.573	Mustela_putorius_furo
ENSODEG00000004150	-	100	86.441	ENSMLUG00000027295	RAB18	100	86.441	Myotis_lucifugus
ENSODEG00000004150	-	100	99.029	ENSNGAG00000001465	Rab18	100	99.029	Nannospalax_galili
ENSODEG00000004150	-	99	84.878	ENSNBRG00000008137	rab18b	99	84.878	Neolamprologus_brichardi
ENSODEG00000004150	-	100	98.544	ENSNLEG00000016970	RAB18	100	98.544	Nomascus_leucogenys
ENSODEG00000004150	-	99	84.878	ENSONIG00000018673	rab18b	99	84.878	Oreochromis_niloticus
ENSODEG00000004150	-	100	97.087	ENSOANG00000021391	RAB18	100	97.087	Ornithorhynchus_anatinus
ENSODEG00000004150	-	100	97.573	ENSOCUG00000022307	RAB18	100	97.573	Oryctolagus_cuniculus
ENSODEG00000004150	-	99	83.902	ENSORLG00000009609	rab18b	99	83.902	Oryzias_latipes
ENSODEG00000004150	-	99	83.902	ENSORLG00020011590	rab18b	99	83.902	Oryzias_latipes_hni
ENSODEG00000004150	-	99	83.902	ENSORLG00015007182	rab18b	99	83.902	Oryzias_latipes_hsok
ENSODEG00000004150	-	99	83.902	ENSOMEG00000007546	rab18b	99	83.902	Oryzias_melastigma
ENSODEG00000004150	-	100	98.544	ENSOGAG00000028015	RAB18	100	98.544	Otolemur_garnettii
ENSODEG00000004150	-	100	98.058	ENSOARG00000016208	RAB18	100	98.058	Ovis_aries
ENSODEG00000004150	-	100	98.544	ENSPPAG00000041625	RAB18	100	98.544	Pan_paniscus
ENSODEG00000004150	-	100	97.573	ENSPPRG00000010314	RAB18	100	97.573	Panthera_pardus
ENSODEG00000004150	-	100	97.573	ENSPTIG00000011667	RAB18	100	97.573	Panthera_tigris_altaica
ENSODEG00000004150	-	100	98.544	ENSPTRG00000002384	RAB18	100	98.544	Pan_troglodytes
ENSODEG00000004150	-	100	98.544	ENSPANG00000023005	RAB18	100	98.544	Papio_anubis
ENSODEG00000004150	-	98	84.804	ENSPMAG00000005322	rab18b	98	84.804	Petromyzon_marinus
ENSODEG00000004150	-	100	97.087	ENSPCIG00000028705	-	88	97.087	Phascolarctos_cinereus
ENSODEG00000004150	-	99	84.878	ENSPFOG00000013491	rab18b	99	84.878	Poecilia_formosa
ENSODEG00000004150	-	99	84.878	ENSPLAG00000019136	rab18b	99	84.878	Poecilia_latipinna
ENSODEG00000004150	-	99	84.878	ENSPMEG00000008223	rab18b	99	84.878	Poecilia_mexicana
ENSODEG00000004150	-	100	98.544	ENSPPYG00000002172	RAB18	100	98.544	Pongo_abelii
ENSODEG00000004150	-	100	98.544	ENSPCOG00000018906	RAB18	100	98.544	Propithecus_coquereli
ENSODEG00000004150	-	99	85.366	ENSPNYG00000001751	rab18b	99	85.366	Pundamilia_nyererei
ENSODEG00000004150	-	100	87.440	ENSPNAG00000002404	rab18b	100	87.440	Pygocentrus_nattereri
ENSODEG00000004150	-	100	99.029	ENSRNOG00000018972	Rab18	100	99.029	Rattus_norvegicus
ENSODEG00000004150	-	100	98.058	ENSRBIG00000035948	RAB18	100	98.058	Rhinopithecus_bieti
ENSODEG00000004150	-	100	98.544	ENSRROG00000040563	RAB18	100	98.544	Rhinopithecus_roxellana
ENSODEG00000004150	-	100	97.573	ENSSHAG00000007613	RAB18	100	97.573	Sarcophilus_harrisii
ENSODEG00000004150	-	99	83.415	ENSSMAG00000011814	rab18b	99	83.415	Scophthalmus_maximus
ENSODEG00000004150	-	99	84.878	ENSSDUG00000005960	rab18b	99	84.878	Seriola_dumerili
ENSODEG00000004150	-	99	84.878	ENSSLDG00000006014	rab18b	99	84.878	Seriola_lalandi_dorsalis
ENSODEG00000004150	-	99	84.390	ENSSPAG00000020875	rab18b	99	84.390	Stegastes_partitus
ENSODEG00000004150	-	100	98.058	ENSSSCG00000028655	RAB18	100	98.058	Sus_scrofa
ENSODEG00000004150	-	100	84.615	ENSTGUG00000001105	-	100	84.615	Taeniopygia_guttata
ENSODEG00000004150	-	99	84.390	ENSTRUG00000004283	rab18b	99	85.922	Takifugu_rubripes
ENSODEG00000004150	-	99	82.439	ENSTNIG00000007882	rab18b	99	82.439	Tetraodon_nigroviridis
ENSODEG00000004150	-	100	97.573	ENSVVUG00000001705	RAB18	100	97.573	Vulpes_vulpes
ENSODEG00000004150	-	99	84.878	ENSXMAG00000006945	rab18b	99	85.366	Xiphophorus_maculatus