EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004151 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 48491 bases
Position: chrJH651602.1:10486178-10534668
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005496	RTC	PF01137.21	1.8e-24	1	1
ENSODEP00000005496	RTC_insert	PF05189.13	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005594	RCL1-201	927	-	ENSODEP00000005496	308 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004151	RCL1	96	81.098	ENSG00000120158	RCL1	98	96.739	Homo_sapiens
ENSODEG00000004151	RCL1	96	67.477	ENSAPOG00000015666	rcl1	88	67.477	Acanthochromis_polyacanthus
ENSODEG00000004151	RCL1	96	79.878	ENSAMEG00000002631	RCL1	88	78.916	Ailuropoda_melanoleuca
ENSODEG00000004151	RCL1	96	67.477	ENSACIG00000021195	rcl1	88	67.477	Amphilophus_citrinellus
ENSODEG00000004151	RCL1	96	67.477	ENSAOCG00000002223	rcl1	88	67.477	Amphiprion_ocellaris
ENSODEG00000004151	RCL1	96	67.477	ENSAPEG00000006905	rcl1	88	67.477	Amphiprion_percula
ENSODEG00000004151	RCL1	96	65.046	ENSATEG00000020026	rcl1	88	65.046	Anabas_testudineus
ENSODEG00000004151	RCL1	96	73.476	ENSAPLG00000006031	RCL1	100	73.476	Anas_platyrhynchos
ENSODEG00000004151	RCL1	96	70.732	ENSACAG00000003640	RCL1	88	70.732	Anolis_carolinensis
ENSODEG00000004151	RCL1	96	80.793	ENSANAG00000037372	RCL1	88	79.819	Aotus_nancymaae
ENSODEG00000004151	RCL1	96	66.869	ENSACLG00000021724	rcl1	88	66.869	Astatotilapia_calliptera
ENSODEG00000004151	RCL1	96	66.467	ENSAMXG00000033394	rcl1	89	66.467	Astyanax_mexicanus
ENSODEG00000004151	RCL1	95	40.588	WBGene00022852	ZK1127.5	88	40.588	Caenorhabditis_elegans
ENSODEG00000004151	RCL1	96	80.793	ENSCJAG00000011202	RCL1	88	79.819	Callithrix_jacchus
ENSODEG00000004151	RCL1	96	79.573	ENSCAFG00000002091	RCL1	88	78.614	Canis_familiaris
ENSODEG00000004151	RCL1	96	79.573	ENSCAFG00020000638	RCL1	69	78.614	Canis_lupus_dingo
ENSODEG00000004151	RCL1	96	79.268	ENSCHIG00000012407	RCL1	88	78.313	Capra_hircus
ENSODEG00000004151	RCL1	95	80.428	ENSTSYG00000009592	RCL1	98	95.652	Carlito_syrichta
ENSODEG00000004151	RCL1	72	76.190	ENSCAPG00000013575	RCL1	100	76.190	Cavia_aperea
ENSODEG00000004151	RCL1	96	79.878	ENSCPOG00000015354	RCL1	88	78.916	Cavia_porcellus
ENSODEG00000004151	RCL1	96	80.793	ENSCCAG00000033505	RCL1	98	95.652	Cebus_capucinus
ENSODEG00000004151	RCL1	96	80.793	ENSCATG00000034721	RCL1	98	96.196	Cercocebus_atys
ENSODEG00000004151	RCL1	96	81.402	ENSCLAG00000007445	RCL1	88	80.422	Chinchilla_lanigera
ENSODEG00000004151	RCL1	96	80.793	ENSCSAG00000008811	RCL1	88	79.819	Chlorocebus_sabaeus
ENSODEG00000004151	RCL1	79	74.275	ENSCHOG00000007216	RCL1	86	74.643	Choloepus_hoffmanni
ENSODEG00000004151	RCL1	96	73.193	ENSCPBG00000025481	RCL1	94	73.193	Chrysemys_picta_bellii
ENSODEG00000004151	RCL1	96	48.943	ENSCING00000019565	-	88	48.943	Ciona_intestinalis
ENSODEG00000004151	RCL1	96	81.098	ENSCANG00000027099	RCL1	88	80.120	Colobus_angolensis_palliatus
ENSODEG00000004151	RCL1	96	79.573	ENSCGRG00001013748	Rcl1	88	78.916	Cricetulus_griseus_chok1gshd
ENSODEG00000004151	RCL1	96	79.573	ENSCGRG00000005843	Rcl1	99	78.916	Cricetulus_griseus_crigri
ENSODEG00000004151	RCL1	96	67.173	ENSCSEG00000000712	rcl1	87	67.173	Cynoglossus_semilaevis
ENSODEG00000004151	RCL1	96	67.781	ENSCVAG00000011536	rcl1	88	67.781	Cyprinodon_variegatus
ENSODEG00000004151	RCL1	96	65.350	ENSDARG00000038312	rcl1	90	65.350	Danio_rerio
ENSODEG00000004151	RCL1	58	96.067	ENSDNOG00000019911	RCL1	83	96.067	Dasypus_novemcinctus
ENSODEG00000004151	RCL1	96	79.878	ENSDORG00000015645	Rcl1	88	78.916	Dipodomys_ordii
ENSODEG00000004151	RCL1	95	45.646	FBgn0020909	Rtc1	87	45.373	Drosophila_melanogaster
ENSODEG00000004151	RCL1	71	100.000	ENSETEG00000014087	-	74	100.000	Echinops_telfairi
ENSODEG00000004151	RCL1	96	47.130	ENSEBUG00000016621	-	88	47.130	Eptatretus_burgeri
ENSODEG00000004151	RCL1	96	78.963	ENSEASG00005010653	RCL1	88	78.012	Equus_asinus_asinus
ENSODEG00000004151	RCL1	96	78.963	ENSECAG00000015973	RCL1	88	78.012	Equus_caballus
ENSODEG00000004151	RCL1	88	67.987	ENSEEUG00000009801	RCL1	80	67.427	Erinaceus_europaeus
ENSODEG00000004151	RCL1	96	64.220	ENSELUG00000007353	rcl1	88	64.220	Esox_lucius
ENSODEG00000004151	RCL1	96	79.268	ENSFCAG00000014557	RCL1	88	78.313	Felis_catus
ENSODEG00000004151	RCL1	95	71.601	ENSFALG00000010553	RCL1	87	71.601	Ficedula_albicollis
ENSODEG00000004151	RCL1	95	80.428	ENSFDAG00000004209	RCL1	100	79.456	Fukomys_damarensis
ENSODEG00000004151	RCL1	96	67.477	ENSFHEG00000011228	rcl1	91	67.273	Fundulus_heteroclitus
ENSODEG00000004151	RCL1	96	65.569	ENSGMOG00000004677	rcl1	88	65.569	Gadus_morhua
ENSODEG00000004151	RCL1	96	71.988	ENSGALG00000015024	RCL1	88	71.988	Gallus_gallus
ENSODEG00000004151	RCL1	96	65.350	ENSGAFG00000007257	rcl1	89	64.671	Gambusia_affinis
ENSODEG00000004151	RCL1	96	65.957	ENSGACG00000017474	rcl1	88	65.957	Gasterosteus_aculeatus
ENSODEG00000004151	RCL1	96	73.795	ENSGAGG00000003689	RCL1	88	73.795	Gopherus_agassizii
ENSODEG00000004151	RCL1	96	80.488	ENSGGOG00000015041	RCL1	98	96.196	Gorilla_gorilla
ENSODEG00000004151	RCL1	96	67.173	ENSHBUG00000001393	rcl1	88	67.173	Haplochromis_burtoni
ENSODEG00000004151	RCL1	96	80.793	ENSHGLG00000016452	RCL1	88	79.819	Heterocephalus_glaber_female
ENSODEG00000004151	RCL1	96	74.675	ENSHGLG00000005368	-	87	74.675	Heterocephalus_glaber_female
ENSODEG00000004151	RCL1	95	80.734	ENSHGLG00100008718	-	94	79.758	Heterocephalus_glaber_male
ENSODEG00000004151	RCL1	96	76.623	ENSHGLG00100018010	-	87	76.623	Heterocephalus_glaber_male
ENSODEG00000004151	RCL1	96	66.261	ENSHCOG00000020170	rcl1	88	66.261	Hippocampus_comes
ENSODEG00000004151	RCL1	96	66.261	ENSIPUG00000018054	RCL1	89	66.261	Ictalurus_punctatus
ENSODEG00000004151	RCL1	96	80.183	ENSSTOG00000000023	RCL1	88	79.268	Ictidomys_tridecemlineatus
ENSODEG00000004151	RCL1	92	71.293	ENSJJAG00000015632	-	85	70.717	Jaculus_jaculus
ENSODEG00000004151	RCL1	55	72.024	ENSJJAG00000000764	-	81	72.024	Jaculus_jaculus
ENSODEG00000004151	RCL1	96	79.878	ENSJJAG00000022803	-	88	79.217	Jaculus_jaculus
ENSODEG00000004151	RCL1	96	65.046	ENSKMAG00000011946	rcl1	88	65.046	Kryptolebias_marmoratus
ENSODEG00000004151	RCL1	97	67.267	ENSLBEG00000003957	rcl1	94	67.267	Labrus_bergylta
ENSODEG00000004151	RCL1	87	65.781	ENSLACG00000004594	RCL1	87	67.845	Latimeria_chalumnae
ENSODEG00000004151	RCL1	96	68.598	ENSLOCG00000010148	rcl1	87	68.598	Lepisosteus_oculatus
ENSODEG00000004151	RCL1	96	78.963	ENSLAFG00000017495	RCL1	88	78.049	Loxodonta_africana
ENSODEG00000004151	RCL1	96	80.793	ENSMFAG00000037906	RCL1	88	79.819	Macaca_fascicularis
ENSODEG00000004151	RCL1	96	80.793	ENSMNEG00000012288	RCL1	98	96.196	Macaca_nemestrina
ENSODEG00000004151	RCL1	96	80.793	ENSMLEG00000043088	RCL1	88	79.819	Mandrillus_leucophaeus
ENSODEG00000004151	RCL1	96	66.869	ENSMAMG00000008311	rcl1	88	66.869	Mastacembelus_armatus
ENSODEG00000004151	RCL1	96	66.869	ENSMZEG00005017292	rcl1	88	66.869	Maylandia_zebra
ENSODEG00000004151	RCL1	63	75.943	ENSMGAG00000002245	RCL1	97	75.943	Meleagris_gallopavo
ENSODEG00000004151	RCL1	67	82.110	ENSMAUG00000008922	Rcl1	99	82.110	Mesocricetus_auratus
ENSODEG00000004151	RCL1	96	79.268	ENSMICG00000015562	RCL1	88	78.313	Microcebus_murinus
ENSODEG00000004151	RCL1	96	79.878	ENSMOCG00000012145	Rcl1	88	79.217	Microtus_ochrogaster
ENSODEG00000004151	RCL1	96	64.848	ENSMMOG00000021264	rcl1	88	64.955	Mola_mola
ENSODEG00000004151	RCL1	90	75.161	ENSMODG00000015377	RCL1	82	74.204	Monodelphis_domestica
ENSODEG00000004151	RCL1	96	65.046	ENSMALG00000018618	rcl1	88	65.046	Monopterus_albus
ENSODEG00000004151	RCL1	96	79.573	MGP_CAROLIEiJ_G0022853	Rcl1	88	78.916	Mus_caroli
ENSODEG00000004151	RCL1	96	80.183	ENSMUSG00000024785	Rcl1	88	79.518	Mus_musculus
ENSODEG00000004151	RCL1	96	79.573	MGP_PahariEiJ_G0014346	Rcl1	100	95.294	Mus_pahari
ENSODEG00000004151	RCL1	96	79.573	MGP_SPRETEiJ_G0023771	Rcl1	100	94.706	Mus_spretus
ENSODEG00000004151	RCL1	96	79.573	ENSMPUG00000004998	RCL1	88	78.614	Mustela_putorius_furo
ENSODEG00000004151	RCL1	96	79.573	ENSMLUG00000009654	RCL1	88	78.916	Myotis_lucifugus
ENSODEG00000004151	RCL1	96	80.183	ENSNGAG00000015327	Rcl1	88	79.518	Nannospalax_galili
ENSODEG00000004151	RCL1	96	67.791	ENSNBRG00000019854	rcl1	90	67.791	Neolamprologus_brichardi
ENSODEG00000004151	RCL1	96	77.439	ENSNLEG00000008891	RCL1	88	76.506	Nomascus_leucogenys
ENSODEG00000004151	RCL1	88	75.248	ENSMEUG00000007653	RCL1	81	74.267	Notamacropus_eugenii
ENSODEG00000004151	RCL1	96	79.878	ENSOPRG00000010965	RCL1	88	79.217	Ochotona_princeps
ENSODEG00000004151	RCL1	96	66.869	ENSONIG00000003871	rcl1	88	66.869	Oreochromis_niloticus
ENSODEG00000004151	RCL1	58	88.827	ENSOANG00000013193	-	88	75.221	Ornithorhynchus_anatinus
ENSODEG00000004151	RCL1	96	80.183	ENSOCUG00000008161	RCL1	88	79.217	Oryctolagus_cuniculus
ENSODEG00000004151	RCL1	96	66.061	ENSORLG00000010443	rcl1	88	66.061	Oryzias_latipes
ENSODEG00000004151	RCL1	96	66.061	ENSORLG00020012211	rcl1	88	66.061	Oryzias_latipes_hni
ENSODEG00000004151	RCL1	96	71.148	ENSORLG00015001122	rcl1	88	71.148	Oryzias_latipes_hsok
ENSODEG00000004151	RCL1	96	66.261	ENSOMEG00000022976	rcl1	78	66.261	Oryzias_melastigma
ENSODEG00000004151	RCL1	96	79.878	ENSOGAG00000007480	RCL1	88	78.916	Otolemur_garnettii
ENSODEG00000004151	RCL1	96	79.573	ENSOARG00000013463	RCL1	88	78.614	Ovis_aries
ENSODEG00000004151	RCL1	96	81.098	ENSPPAG00000037958	RCL1	88	80.120	Pan_paniscus
ENSODEG00000004151	RCL1	95	78.834	ENSPPRG00000022645	RCL1	99	92.935	Panthera_pardus
ENSODEG00000004151	RCL1	95	79.141	ENSPTIG00000019031	RCL1	99	81.651	Panthera_tigris_altaica
ENSODEG00000004151	RCL1	96	80.793	ENSPTRG00000020743	RCL1	98	96.739	Pan_troglodytes
ENSODEG00000004151	RCL1	96	80.793	ENSPANG00000025151	RCL1	88	79.819	Papio_anubis
ENSODEG00000004151	RCL1	96	65.957	ENSPKIG00000021022	rcl1	88	65.957	Paramormyrops_kingsleyae
ENSODEG00000004151	RCL1	96	73.193	ENSPSIG00000012302	RCL1	100	73.193	Pelodiscus_sinensis
ENSODEG00000004151	RCL1	96	65.350	ENSPMGG00000024007	rcl1	88	65.350	Periophthalmus_magnuspinnatus
ENSODEG00000004151	RCL1	96	79.878	ENSPEMG00000023275	Rcl1	88	79.217	Peromyscus_maniculatus_bairdii
ENSODEG00000004151	RCL1	60	67.380	ENSPMAG00000005419	-	99	67.380	Petromyzon_marinus
ENSODEG00000004151	RCL1	96	76.829	ENSPCIG00000000188	RCL1	93	75.831	Phascolarctos_cinereus
ENSODEG00000004151	RCL1	96	66.261	ENSPFOG00000019682	rcl1	88	66.261	Poecilia_formosa
ENSODEG00000004151	RCL1	96	66.261	ENSPLAG00000022354	rcl1	88	66.261	Poecilia_latipinna
ENSODEG00000004151	RCL1	96	66.261	ENSPMEG00000008131	rcl1	88	66.261	Poecilia_mexicana
ENSODEG00000004151	RCL1	96	65.957	ENSPREG00000008032	rcl1	88	65.957	Poecilia_reticulata
ENSODEG00000004151	RCL1	96	80.793	ENSPPYG00000019244	RCL1	88	79.819	Pongo_abelii
ENSODEG00000004151	RCL1	95	68.405	ENSPCAG00000001440	RCL1	88	68.788	Procavia_capensis
ENSODEG00000004151	RCL1	96	79.878	ENSPCOG00000009611	RCL1	98	95.109	Propithecus_coquereli
ENSODEG00000004151	RCL1	96	79.817	ENSPVAG00000015752	RCL1	88	79.154	Pteropus_vampyrus
ENSODEG00000004151	RCL1	96	66.869	ENSPNYG00000012910	rcl1	88	66.869	Pundamilia_nyererei
ENSODEG00000004151	RCL1	96	67.665	ENSPNAG00000028307	rcl1	81	67.665	Pygocentrus_nattereri
ENSODEG00000004151	RCL1	96	79.268	ENSRNOG00000015491	Rcl1	88	78.614	Rattus_norvegicus
ENSODEG00000004151	RCL1	96	80.793	ENSRBIG00000035818	RCL1	88	79.819	Rhinopithecus_bieti
ENSODEG00000004151	RCL1	96	80.793	ENSRROG00000029781	RCL1	98	96.196	Rhinopithecus_roxellana
ENSODEG00000004151	RCL1	95	30.606	YOL010W	-	87	30.606	Saccharomyces_cerevisiae
ENSODEG00000004151	RCL1	96	80.793	ENSSBOG00000026369	RCL1	98	95.652	Saimiri_boliviensis_boliviensis
ENSODEG00000004151	RCL1	96	76.900	ENSSHAG00000014086	RCL1	99	75.976	Sarcophilus_harrisii
ENSODEG00000004151	RCL1	96	66.261	ENSSFOG00015023020	rcl1	88	66.261	Scleropages_formosus
ENSODEG00000004151	RCL1	96	66.869	ENSSMAG00000019751	rcl1	76	66.869	Scophthalmus_maximus
ENSODEG00000004151	RCL1	96	66.869	ENSSDUG00000006349	rcl1	88	66.869	Seriola_dumerili
ENSODEG00000004151	RCL1	96	66.565	ENSSLDG00000022076	rcl1	88	66.565	Seriola_lalandi_dorsalis
ENSODEG00000004151	RCL1	96	79.268	ENSSARG00000009260	RCL1	88	78.313	Sorex_araneus
ENSODEG00000004151	RCL1	96	74.085	ENSSPUG00000016330	RCL1	88	74.085	Sphenodon_punctatus
ENSODEG00000004151	RCL1	96	68.693	ENSSPAG00000018038	rcl1	88	68.693	Stegastes_partitus
ENSODEG00000004151	RCL1	96	80.183	ENSSSCG00000005217	RCL1	73	79.217	Sus_scrofa
ENSODEG00000004151	RCL1	96	70.958	ENSTGUG00000005138	RCL1	88	70.958	Taeniopygia_guttata
ENSODEG00000004151	RCL1	96	68.085	ENSTRUG00000010493	rcl1	88	68.085	Takifugu_rubripes
ENSODEG00000004151	RCL1	96	67.988	ENSTNIG00000013214	rcl1	88	67.988	Tetraodon_nigroviridis
ENSODEG00000004151	RCL1	96	78.614	ENSTBEG00000016339	RCL1	88	78.614	Tupaia_belangeri
ENSODEG00000004151	RCL1	96	76.807	ENSTTRG00000016525	RCL1	88	76.807	Tursiops_truncatus
ENSODEG00000004151	RCL1	96	79.878	ENSUAMG00000005598	RCL1	88	78.916	Ursus_americanus
ENSODEG00000004151	RCL1	97	78.614	ENSUMAG00000017890	RCL1	99	77.679	Ursus_maritimus
ENSODEG00000004151	RCL1	95	79.817	ENSVPAG00000009188	RCL1	100	78.852	Vicugna_pacos
ENSODEG00000004151	RCL1	96	79.573	ENSVVUG00000007304	RCL1	89	78.614	Vulpes_vulpes
ENSODEG00000004151	RCL1	96	61.862	ENSXETG00000000592	rcl1	88	61.862	Xenopus_tropicalis
ENSODEG00000004151	RCL1	96	66.261	ENSXCOG00000004922	rcl1	88	66.261	Xiphophorus_couchianus
ENSODEG00000004151	RCL1	96	66.261	ENSXMAG00000022366	RCL1	88	66.261	Xiphophorus_maculatus