EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 905 bases
Position: chrJH651683.1:453495-454399
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005544	RRM_1	PF00076.22	4.3e-23	1	2
ENSODEP00000005544	RRM_1	PF00076.22	4.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005643	-	870	-	ENSODEP00000005544	289 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004187	-	65	34.300	ENSODEG00000018537	-	50	34.118
ENSODEG00000004187	-	57	34.503	ENSODEG00000000671	-	51	35.443
ENSODEG00000004187	-	57	32.787	ENSODEG00000020462	-	53	33.529
ENSODEG00000004187	-	65	37.805	ENSODEG00000005746	-	81	33.588
ENSODEG00000004187	-	60	34.896	ENSODEG00000008757	-	58	34.706
ENSODEG00000004187	-	93	92.857	ENSODEG00000002106	-	70	93.165
ENSODEG00000004187	-	53	32.353	ENSODEG00000019566	HNRNPA0	56	32.353
ENSODEG00000004187	-	57	33.333	ENSODEG00000006941	-	58	33.333
ENSODEG00000004187	-	99	89.597	ENSODEG00000003135	-	100	89.597
ENSODEG00000004187	-	57	32.787	ENSODEG00000019007	-	53	33.529
ENSODEG00000004187	-	53	35.294	ENSODEG00000003755	-	84	30.743
ENSODEG00000004187	-	57	32.787	ENSODEG00000019306	-	53	33.529
ENSODEG00000004187	-	96	60.069	ENSODEG00000001897	HNRNPD	87	59.450
ENSODEG00000004187	-	82	39.300	ENSODEG00000011974	MSI2	53	45.405
ENSODEG00000004187	-	53	30.263	ENSODEG00000009329	-	52	30.263
ENSODEG00000004187	-	94	90.813	ENSODEG00000000376	-	81	90.813
ENSODEG00000004187	-	96	55.208	ENSODEG00000006830	HNRNPAB	83	55.670
ENSODEG00000004187	-	57	32.787	ENSODEG00000005110	-	61	32.787
ENSODEG00000004187	-	57	32.164	ENSODEG00000013137	-	53	33.125
ENSODEG00000004187	-	62	34.518	ENSODEG00000006322	-	50	35.882
ENSODEG00000004187	-	57	32.240	ENSODEG00000014833	-	54	32.941
ENSODEG00000004187	-	57	32.240	ENSODEG00000019577	-	53	32.941
ENSODEG00000004187	-	53	35.294	ENSODEG00000016578	-	54	35.294
ENSODEG00000004187	-	100	91.694	ENSODEG00000020231	-	85	91.694
ENSODEG00000004187	-	53	34.706	ENSODEG00000003691	-	84	31.525
ENSODEG00000004187	-	57	31.148	ENSODEG00000013694	-	51	31.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004187	-	100	93.688	ENSG00000152795	HNRNPDL	100	93.688	Homo_sapiens
ENSODEG00000004187	-	99	93.559	ENSAMEG00000005145	-	79	93.559	Ailuropoda_melanoleuca
ENSODEG00000004187	-	100	71.617	ENSAMEG00000007660	-	100	69.967	Ailuropoda_melanoleuca
ENSODEG00000004187	-	99	88.258	ENSAPLG00000011774	HNRNPDL	99	88.258	Anas_platyrhynchos
ENSODEG00000004187	-	97	86.598	ENSACAG00000010416	HNRNPDL	92	86.598	Anolis_carolinensis
ENSODEG00000004187	-	100	86.379	ENSANAG00000030316	-	96	77.519	Aotus_nancymaae
ENSODEG00000004187	-	100	93.688	ENSANAG00000029054	HNRNPDL	72	93.688	Aotus_nancymaae
ENSODEG00000004187	-	100	81.063	ENSANAG00000035355	-	100	81.063	Aotus_nancymaae
ENSODEG00000004187	-	96	72.065	ENSANAG00000035255	-	99	71.255	Aotus_nancymaae
ENSODEG00000004187	-	100	85.099	ENSANAG00000038001	-	100	85.099	Aotus_nancymaae
ENSODEG00000004187	-	97	68.136	ENSAMXG00000001495	hnrnpdl	97	71.672	Astyanax_mexicanus
ENSODEG00000004187	-	100	93.688	ENSBTAG00000014804	HNRNPDL	72	93.688	Bos_taurus
ENSODEG00000004187	-	100	93.688	ENSCJAG00000015197	-	72	93.688	Callithrix_jacchus
ENSODEG00000004187	-	69	88.095	ENSCJAG00000045227	-	70	87.755	Callithrix_jacchus
ENSODEG00000004187	-	100	93.688	ENSCAFG00000008940	HNRNPDL	72	93.688	Canis_familiaris
ENSODEG00000004187	-	96	77.778	ENSCAFG00000000776	-	100	77.778	Canis_familiaris
ENSODEG00000004187	-	100	93.688	ENSCAFG00020010699	-	72	93.688	Canis_lupus_dingo
ENSODEG00000004187	-	100	81.152	ENSCHIG00000026667	-	62	92.308	Capra_hircus
ENSODEG00000004187	-	100	93.688	ENSCHIG00000010260	-	72	93.688	Capra_hircus
ENSODEG00000004187	-	99	91.912	ENSTSYG00000031074	-	100	91.912	Carlito_syrichta
ENSODEG00000004187	-	96	75.347	ENSTSYG00000036907	-	100	75.347	Carlito_syrichta
ENSODEG00000004187	-	61	82.286	ENSTSYG00000026714	-	96	80.328	Carlito_syrichta
ENSODEG00000004187	-	89	76.580	ENSCAPG00000015955	-	100	76.580	Cavia_aperea
ENSODEG00000004187	-	99	91.554	ENSCPOG00000015619	-	73	91.554	Cavia_porcellus
ENSODEG00000004187	-	100	93.688	ENSCCAG00000020777	HNRNPDL	72	93.688	Cebus_capucinus
ENSODEG00000004187	-	53	84.848	ENSCCAG00000020531	-	77	84.848	Cebus_capucinus
ENSODEG00000004187	-	66	89.109	ENSCATG00000030349	-	87	90.306	Cercocebus_atys
ENSODEG00000004187	-	99	90.000	ENSCATG00000038573	-	71	90.000	Cercocebus_atys
ENSODEG00000004187	-	100	93.688	ENSCLAG00000008428	HNRNPDL	71	93.688	Chinchilla_lanigera
ENSODEG00000004187	-	100	76.817	ENSCLAG00000010786	-	100	77.509	Chinchilla_lanigera
ENSODEG00000004187	-	100	93.688	ENSCSAG00000004461	HNRNPDL	72	93.688	Chlorocebus_sabaeus
ENSODEG00000004187	-	99	88.593	ENSCHOG00000009204	-	100	88.593	Choloepus_hoffmanni
ENSODEG00000004187	-	100	90.033	ENSCHOG00000003275	-	89	84.385	Choloepus_hoffmanni
ENSODEG00000004187	-	99	90.809	ENSCHOG00000002938	-	100	90.809	Choloepus_hoffmanni
ENSODEG00000004187	-	97	92.123	ENSCHOG00000000160	-	100	92.123	Choloepus_hoffmanni
ENSODEG00000004187	-	100	90.698	ENSCHOG00000010831	-	90	90.698	Choloepus_hoffmanni
ENSODEG00000004187	-	100	88.119	ENSCPBG00000008014	HNRNPDL	100	88.119	Chrysemys_picta_bellii
ENSODEG00000004187	-	99	93.015	ENSCANG00000020228	-	100	93.015	Colobus_angolensis_palliatus
ENSODEG00000004187	-	100	93.355	ENSCGRG00001010960	Hnrnpdl	86	92.647	Cricetulus_griseus_chok1gshd
ENSODEG00000004187	-	99	90.357	ENSCGRG00000011361	-	99	90.357	Cricetulus_griseus_crigri
ENSODEG00000004187	-	97	70.307	ENSDARG00000003429	hnrnpdl	99	71.429	Danio_rerio
ENSODEG00000004187	-	100	93.023	ENSDNOG00000003887	-	72	93.023	Dasypus_novemcinctus
ENSODEG00000004187	-	96	91.259	ENSDNOG00000033760	-	93	91.259	Dasypus_novemcinctus
ENSODEG00000004187	-	71	100.000	ENSDNOG00000033765	-	90	100.000	Dasypus_novemcinctus
ENSODEG00000004187	-	91	59.353	ENSDNOG00000034016	-	96	58.065	Dasypus_novemcinctus
ENSODEG00000004187	-	62	66.839	ENSDNOG00000046422	-	99	67.188	Dasypus_novemcinctus
ENSODEG00000004187	-	100	90.033	ENSDNOG00000018280	-	97	90.033	Dasypus_novemcinctus
ENSODEG00000004187	-	100	93.688	ENSDORG00000000968	-	71	93.688	Dipodomys_ordii
ENSODEG00000004187	-	100	86.711	ENSDORG00000024157	-	100	88.040	Dipodomys_ordii
ENSODEG00000004187	-	76	59.657	ENSETEG00000010820	-	100	58.369	Echinops_telfairi
ENSODEG00000004187	-	100	93.688	ENSEASG00005016276	-	72	93.688	Equus_asinus_asinus
ENSODEG00000004187	-	99	47.419	ENSEASG00005012961	-	75	55.959	Equus_asinus_asinus
ENSODEG00000004187	-	100	93.688	ENSECAG00000022692	HNRNPDL	75	93.688	Equus_caballus
ENSODEG00000004187	-	99	47.987	ENSECAG00000040564	-	79	51.452	Equus_caballus
ENSODEG00000004187	-	100	92.384	ENSEEUG00000004301	-	72	92.384	Erinaceus_europaeus
ENSODEG00000004187	-	97	72.696	ENSELUG00000003241	hnrnpdl	97	72.696	Esox_lucius
ENSODEG00000004187	-	100	93.688	ENSFCAG00000000455	HNRNPDL	72	93.688	Felis_catus
ENSODEG00000004187	-	100	87.086	ENSFALG00000005709	HNRNPDL	100	87.086	Ficedula_albicollis
ENSODEG00000004187	-	70	50.000	ENSFDAG00000002891	-	52	53.158	Fukomys_damarensis
ENSODEG00000004187	-	99	93.040	ENSFDAG00000000851	-	99	93.040	Fukomys_damarensis
ENSODEG00000004187	-	100	87.417	ENSGALG00000023199	HNRNPDL	100	87.417	Gallus_gallus
ENSODEG00000004187	-	100	88.119	ENSGAGG00000003646	HNRNPDL	100	88.119	Gopherus_agassizii
ENSODEG00000004187	-	100	93.688	ENSGGOG00000003714	HNRNPDL	72	93.688	Gorilla_gorilla
ENSODEG00000004187	-	100	71.761	ENSHGLG00000014427	-	88	88.265	Heterocephalus_glaber_female
ENSODEG00000004187	-	95	88.433	ENSHGLG00000013420	-	90	88.433	Heterocephalus_glaber_female
ENSODEG00000004187	-	100	93.355	ENSHGLG00000015791	HNRNPDL	71	93.355	Heterocephalus_glaber_female
ENSODEG00000004187	-	100	83.391	ENSHGLG00100016282	-	100	80.277	Heterocephalus_glaber_male
ENSODEG00000004187	-	100	78.146	ENSHGLG00100017644	-	100	77.152	Heterocephalus_glaber_male
ENSODEG00000004187	-	100	93.355	ENSHGLG00100005262	HNRNPDL	89	93.355	Heterocephalus_glaber_male
ENSODEG00000004187	-	100	77.409	ENSHGLG00100019080	-	92	75.748	Heterocephalus_glaber_male
ENSODEG00000004187	-	99	72.727	ENSHGLG00100010072	-	93	70.979	Heterocephalus_glaber_male
ENSODEG00000004187	-	97	65.529	ENSIPUG00000024951	hnrnpdl	97	68.601	Ictalurus_punctatus
ENSODEG00000004187	-	100	93.688	ENSSTOG00000013979	HNRNPDL	72	93.688	Ictidomys_tridecemlineatus
ENSODEG00000004187	-	72	100.000	ENSJJAG00000000674	-	81	63.455	Jaculus_jaculus
ENSODEG00000004187	-	100	93.688	ENSJJAG00000021673	Hnrnpdl	71	93.688	Jaculus_jaculus
ENSODEG00000004187	-	71	100.000	ENSLACG00000003613	HNRNPDL	85	100.000	Latimeria_chalumnae
ENSODEG00000004187	-	97	73.038	ENSLOCG00000010736	hnrnpdl	97	73.038	Lepisosteus_oculatus
ENSODEG00000004187	-	100	93.355	ENSLAFG00000008612	HNRNPDL	91	92.647	Loxodonta_africana
ENSODEG00000004187	-	89	48.699	ENSLAFG00000031444	-	72	54.922	Loxodonta_africana
ENSODEG00000004187	-	100	93.688	ENSMFAG00000002275	HNRNPDL	72	93.688	Macaca_fascicularis
ENSODEG00000004187	-	99	92.593	ENSMMUG00000015777	HNRNPDL	100	92.593	Macaca_mulatta
ENSODEG00000004187	-	100	93.688	ENSMNEG00000045130	HNRNPDL	72	93.688	Macaca_nemestrina
ENSODEG00000004187	-	100	93.688	ENSMLEG00000041600	HNRNPDL	100	93.688	Mandrillus_leucophaeus
ENSODEG00000004187	-	100	89.037	ENSMLEG00000014825	-	100	89.037	Mandrillus_leucophaeus
ENSODEG00000004187	-	99	86.029	ENSMGAG00000008033	HNRNPDL	100	86.029	Meleagris_gallopavo
ENSODEG00000004187	-	100	92.691	ENSMAUG00000011132	Hnrnpdl	86	92.279	Mesocricetus_auratus
ENSODEG00000004187	-	100	93.355	ENSMICG00000001445	-	71	93.355	Microcebus_murinus
ENSODEG00000004187	-	68	88.942	ENSMICG00000037040	-	89	88.776	Microcebus_murinus
ENSODEG00000004187	-	100	92.691	ENSMOCG00000015928	Hnrnpdl	71	92.691	Microtus_ochrogaster
ENSODEG00000004187	-	100	92.691	ENSMODG00000011916	-	72	92.691	Monodelphis_domestica
ENSODEG00000004187	-	72	100.000	ENSMODG00000006825	-	91	100.000	Monodelphis_domestica
ENSODEG00000004187	-	100	93.355	ENSMUSG00000029328	Hnrnpdl	93	93.355	Mus_musculus
ENSODEG00000004187	-	100	93.023	MGP_PahariEiJ_G0017226	Hnrnpdl	93	93.023	Mus_pahari
ENSODEG00000004187	-	100	93.355	MGP_SPRETEiJ_G0028445	Hnrnpdl	93	93.355	Mus_spretus
ENSODEG00000004187	-	90	68.441	ENSMPUG00000011188	-	99	61.091	Mustela_putorius_furo
ENSODEG00000004187	-	95	70.732	ENSMPUG00000006259	-	100	70.732	Mustela_putorius_furo
ENSODEG00000004187	-	99	93.156	ENSMPUG00000014753	-	99	93.156	Mustela_putorius_furo
ENSODEG00000004187	-	100	88.704	ENSMPUG00000009986	-	92	87.043	Mustela_putorius_furo
ENSODEG00000004187	-	96	44.595	ENSMLUG00000030192	-	82	46.862	Myotis_lucifugus
ENSODEG00000004187	-	96	67.931	ENSMLUG00000025989	-	91	64.894	Myotis_lucifugus
ENSODEG00000004187	-	100	93.023	ENSMLUG00000014452	-	72	93.023	Myotis_lucifugus
ENSODEG00000004187	-	100	92.359	ENSNGAG00000015740	Hnrnpdl	72	92.359	Nannospalax_galili
ENSODEG00000004187	-	100	93.688	ENSNLEG00000008636	HNRNPDL	89	91.500	Nomascus_leucogenys
ENSODEG00000004187	-	68	89.904	ENSMEUG00000011454	-	81	89.796	Notamacropus_eugenii
ENSODEG00000004187	-	100	76.744	ENSMEUG00000010033	HNRNPDL	90	76.080	Notamacropus_eugenii
ENSODEG00000004187	-	99	91.912	ENSOPRG00000007178	-	100	91.912	Ochotona_princeps
ENSODEG00000004187	-	99	92.989	ENSOANG00000004651	HNRNPDL	100	92.989	Ornithorhynchus_anatinus
ENSODEG00000004187	-	72	51.142	ENSOCUG00000025252	-	88	54.167	Oryctolagus_cuniculus
ENSODEG00000004187	-	100	91.694	ENSOCUG00000013805	-	73	91.694	Oryctolagus_cuniculus
ENSODEG00000004187	-	99	47.333	ENSOGAG00000024995	-	66	58.549	Otolemur_garnettii
ENSODEG00000004187	-	100	91.030	ENSOGAG00000002501	-	72	92.027	Otolemur_garnettii
ENSODEG00000004187	-	68	81.726	ENSOGAG00000031703	-	81	83.607	Otolemur_garnettii
ENSODEG00000004187	-	99	93.015	ENSOARG00000000824	-	84	93.015	Ovis_aries
ENSODEG00000004187	-	63	95.238	ENSOARG00000011472	-	66	95.238	Ovis_aries
ENSODEG00000004187	-	66	79.310	ENSOARG00000002402	-	65	78.571	Ovis_aries
ENSODEG00000004187	-	100	93.688	ENSPPAG00000043177	HNRNPDL	72	93.688	Pan_paniscus
ENSODEG00000004187	-	100	93.688	ENSPPRG00000013787	HNRNPDL	72	93.688	Panthera_pardus
ENSODEG00000004187	-	100	93.688	ENSPTIG00000018505	HNRNPDL	100	93.688	Panthera_tigris_altaica
ENSODEG00000004187	-	100	93.688	ENSPTRG00000016217	HNRNPDL	72	93.688	Pan_troglodytes
ENSODEG00000004187	-	100	93.688	ENSPANG00000004761	HNRNPDL	72	93.688	Papio_anubis
ENSODEG00000004187	-	97	73.810	ENSPKIG00000025514	hnrnpdl	97	72.014	Paramormyrops_kingsleyae
ENSODEG00000004187	-	100	88.449	ENSPSIG00000016746	HNRNPDL	90	88.449	Pelodiscus_sinensis
ENSODEG00000004187	-	99	92.279	ENSPEMG00000016545	-	98	86.780	Peromyscus_maniculatus_bairdii
ENSODEG00000004187	-	67	69.417	ENSPCIG00000009814	-	71	70.899	Phascolarctos_cinereus
ENSODEG00000004187	-	100	92.691	ENSPCIG00000003089	-	72	92.691	Phascolarctos_cinereus
ENSODEG00000004187	-	100	93.688	ENSPPYG00000014886	HNRNPDL	72	93.688	Pongo_abelii
ENSODEG00000004187	-	99	92.647	ENSPCAG00000011543	HNRNPDL	65	92.647	Procavia_capensis
ENSODEG00000004187	-	100	93.355	ENSPCOG00000019831	-	72	93.355	Propithecus_coquereli
ENSODEG00000004187	-	100	86.711	ENSPVAG00000006816	HNRNPDL	72	86.711	Pteropus_vampyrus
ENSODEG00000004187	-	90	69.118	ENSPNAG00000016380	hnrnpdl	80	71.849	Pygocentrus_nattereri
ENSODEG00000004187	-	100	91.694	ENSRNOG00000002270	Hnrnpdl	84	90.809	Rattus_norvegicus
ENSODEG00000004187	-	100	93.688	ENSRBIG00000030310	HNRNPDL	72	93.688	Rhinopithecus_bieti
ENSODEG00000004187	-	100	93.688	ENSRROG00000034174	HNRNPDL	72	93.688	Rhinopithecus_roxellana
ENSODEG00000004187	-	100	76.412	ENSSBOG00000022627	-	100	76.412	Saimiri_boliviensis_boliviensis
ENSODEG00000004187	-	100	89.384	ENSSBOG00000020566	-	100	89.384	Saimiri_boliviensis_boliviensis
ENSODEG00000004187	-	81	70.850	ENSSBOG00000028904	-	99	70.040	Saimiri_boliviensis_boliviensis
ENSODEG00000004187	-	100	92.691	ENSSHAG00000013616	-	80	92.691	Sarcophilus_harrisii
ENSODEG00000004187	-	97	73.559	ENSSFOG00015005893	hnrnpdl	97	73.038	Scleropages_formosus
ENSODEG00000004187	-	90	87.654	ENSSARG00000009961	-	98	87.654	Sorex_araneus
ENSODEG00000004187	-	100	80.858	ENSSPUG00000013700	HNRNPDL	100	81.848	Sphenodon_punctatus
ENSODEG00000004187	-	99	49.498	ENSSSCG00000012473	-	67	58.333	Sus_scrofa
ENSODEG00000004187	-	100	93.688	ENSSSCG00000037245	-	72	93.688	Sus_scrofa
ENSODEG00000004187	-	99	87.500	ENSTGUG00000002850	HNRNPDL	100	87.500	Taeniopygia_guttata
ENSODEG00000004187	-	94	92.958	ENSTBEG00000002817	-	72	92.958	Tupaia_belangeri
ENSODEG00000004187	-	100	89.037	ENSTTRG00000001793	-	72	89.037	Tursiops_truncatus
ENSODEG00000004187	-	100	93.688	ENSUAMG00000011358	HNRNPDL	72	93.688	Ursus_americanus
ENSODEG00000004187	-	100	93.688	ENSUMAG00000008681	HNRNPDL	72	93.688	Ursus_maritimus
ENSODEG00000004187	-	90	72.426	ENSVPAG00000002422	-	100	72.426	Vicugna_pacos
ENSODEG00000004187	-	100	83.660	ENSVVUG00000013596	-	100	82.680	Vulpes_vulpes
ENSODEG00000004187	-	73	70.330	ENSVVUG00000001421	-	95	70.330	Vulpes_vulpes
ENSODEG00000004187	-	100	93.355	ENSVVUG00000024653	HNRNPDL	72	93.355	Vulpes_vulpes
ENSODEG00000004187	-	99	77.333	ENSXETG00000023026	hnrnpdl	100	76.000	Xenopus_tropicalis