EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004280 (Gene tree)
Gene ID: 101580805
Gene Symbol: PUS3
Alias: -
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3477 bases
Position: chrJH651651.1:2241197-2244673
Accession: 101580805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005678	PseudoU_synth_1	PF01416.20	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005777	PUS3-201	1472	XM_004641395	ENSODEP00000005678	480 (aa)	XP_004641452	UPI0003339FEC

Gene Model

Click here to download ENSODEG00000004280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004280	PUS3	100	86.071	ENSG00000110060	PUS3	100	87.546	Homo_sapiens
ENSODEG00000004280	PUS3	88	53.241	ENSAPOG00000019483	pus3	93	53.349	Acanthochromis_polyacanthus
ENSODEG00000004280	PUS3	99	86.042	ENSAMEG00000000144	PUS3	99	86.042	Ailuropoda_melanoleuca
ENSODEG00000004280	PUS3	63	62.857	ENSACIG00000024479	pus3	99	56.740	Amphilophus_citrinellus
ENSODEG00000004280	PUS3	88	52.318	ENSAOCG00000006589	pus3	91	52.423	Amphiprion_ocellaris
ENSODEG00000004280	PUS3	88	51.435	ENSAPEG00000014617	pus3	91	51.991	Amphiprion_percula
ENSODEG00000004280	PUS3	88	53.034	ENSATEG00000022731	pus3	90	53.139	Anabas_testudineus
ENSODEG00000004280	PUS3	89	68.265	ENSAPLG00000013285	PUS3	98	68.265	Anas_platyrhynchos
ENSODEG00000004280	PUS3	90	68.337	ENSACAG00000000186	PUS3	96	68.337	Anolis_carolinensis
ENSODEG00000004280	PUS3	100	85.208	ENSANAG00000035614	PUS3	100	85.208	Aotus_nancymaae
ENSODEG00000004280	PUS3	89	51.876	ENSACLG00000007356	pus3	91	52.339	Astatotilapia_calliptera
ENSODEG00000004280	PUS3	88	52.444	ENSAMXG00000019534	pus3	93	51.828	Astyanax_mexicanus
ENSODEG00000004280	PUS3	100	85.477	ENSBTAG00000014339	PUS3	100	85.477	Bos_taurus
ENSODEG00000004280	PUS3	69	39.474	WBGene00006473	tag-124	83	39.474	Caenorhabditis_elegans
ENSODEG00000004280	PUS3	100	85.000	ENSCJAG00000046645	PUS3	100	85.000	Callithrix_jacchus
ENSODEG00000004280	PUS3	99	85.625	ENSCAFG00000010534	PUS3	99	85.625	Canis_familiaris
ENSODEG00000004280	PUS3	99	85.625	ENSCAFG00020010659	PUS3	99	85.625	Canis_lupus_dingo
ENSODEG00000004280	PUS3	99	84.407	ENSCHIG00000012260	PUS3	99	84.407	Capra_hircus
ENSODEG00000004280	PUS3	100	86.279	ENSTSYG00000014744	PUS3	99	86.279	Carlito_syrichta
ENSODEG00000004280	PUS3	100	89.397	ENSCAPG00000012231	PUS3	100	89.397	Cavia_aperea
ENSODEG00000004280	PUS3	100	89.397	ENSCPOG00000032587	PUS3	100	89.397	Cavia_porcellus
ENSODEG00000004280	PUS3	99	85.294	ENSCCAG00000035999	PUS3	99	85.294	Cebus_capucinus
ENSODEG00000004280	PUS3	100	85.863	ENSCATG00000043123	PUS3	100	85.863	Cercocebus_atys
ENSODEG00000004280	PUS3	100	93.971	ENSCLAG00000014947	PUS3	100	93.971	Chinchilla_lanigera
ENSODEG00000004280	PUS3	100	85.239	ENSCSAG00000002281	PUS3	100	85.239	Chlorocebus_sabaeus
ENSODEG00000004280	PUS3	79	85.185	ENSCHOG00000008442	PUS3	100	85.185	Choloepus_hoffmanni
ENSODEG00000004280	PUS3	56	68.705	ENSCPBG00000011173	PUS3	98	68.705	Chrysemys_picta_bellii
ENSODEG00000004280	PUS3	64	35.882	ENSCING00000009062	-	66	35.882	Ciona_intestinalis
ENSODEG00000004280	PUS3	85	35.981	ENSCSAVG00000002211	-	95	36.111	Ciona_savignyi
ENSODEG00000004280	PUS3	100	84.823	ENSCANG00000038729	PUS3	100	84.823	Colobus_angolensis_palliatus
ENSODEG00000004280	PUS3	100	85.062	ENSCGRG00001019842	Pus3	100	85.062	Cricetulus_griseus_chok1gshd
ENSODEG00000004280	PUS3	100	84.647	ENSCGRG00000010155	Pus3	100	84.647	Cricetulus_griseus_crigri
ENSODEG00000004280	PUS3	88	52.791	ENSCSEG00000007948	pus3	89	52.791	Cynoglossus_semilaevis
ENSODEG00000004280	PUS3	89	50.998	ENSCVAG00000022150	pus3	90	50.998	Cyprinodon_variegatus
ENSODEG00000004280	PUS3	88	54.128	ENSDARG00000028976	pus3	92	53.437	Danio_rerio
ENSODEG00000004280	PUS3	99	83.473	ENSDNOG00000040719	PUS3	99	83.473	Dasypus_novemcinctus
ENSODEG00000004280	PUS3	99	85.208	ENSDORG00000001819	Pus3	99	85.208	Dipodomys_ordii
ENSODEG00000004280	PUS3	83	40.503	FBgn0034703	CG3045	82	40.503	Drosophila_melanogaster
ENSODEG00000004280	PUS3	100	78.378	ENSETEG00000013067	PUS3	99	78.378	Echinops_telfairi
ENSODEG00000004280	PUS3	78	52.381	ENSEBUG00000002154	pus3	60	53.398	Eptatretus_burgeri
ENSODEG00000004280	PUS3	100	86.279	ENSEASG00005023003	PUS3	100	86.279	Equus_asinus_asinus
ENSODEG00000004280	PUS3	100	86.279	ENSECAG00000007581	PUS3	100	86.279	Equus_caballus
ENSODEG00000004280	PUS3	100	82.328	ENSEEUG00000010543	PUS3	100	82.328	Erinaceus_europaeus
ENSODEG00000004280	PUS3	89	54.867	ENSELUG00000004425	pus3	95	54.405	Esox_lucius
ENSODEG00000004280	PUS3	99	86.667	ENSFCAG00000005340	PUS3	99	86.667	Felis_catus
ENSODEG00000004280	PUS3	99	63.505	ENSFALG00000005159	PUS3	100	63.505	Ficedula_albicollis
ENSODEG00000004280	PUS3	100	91.684	ENSFDAG00000020745	PUS3	100	91.684	Fukomys_damarensis
ENSODEG00000004280	PUS3	98	48.800	ENSFHEG00000010984	pus3	93	48.800	Fundulus_heteroclitus
ENSODEG00000004280	PUS3	89	51.501	ENSGMOG00000004534	pus3	95	51.501	Gadus_morhua
ENSODEG00000004280	PUS3	93	65.859	ENSGALG00000000962	PUS3	97	65.859	Gallus_gallus
ENSODEG00000004280	PUS3	90	50.327	ENSGAFG00000005615	pus3	92	50.217	Gambusia_affinis
ENSODEG00000004280	PUS3	89	52.414	ENSGACG00000002125	pus3	90	52.847	Gasterosteus_aculeatus
ENSODEG00000004280	PUS3	99	68.496	ENSGAGG00000000160	PUS3	99	68.496	Gopherus_agassizii
ENSODEG00000004280	PUS3	100	86.071	ENSGGOG00000015047	PUS3	100	86.071	Gorilla_gorilla
ENSODEG00000004280	PUS3	88	52.009	ENSHBUG00000016532	pus3	91	52.116	Haplochromis_burtoni
ENSODEG00000004280	PUS3	100	79.002	ENSHGLG00000018861	-	100	79.002	Heterocephalus_glaber_female
ENSODEG00000004280	PUS3	57	75.458	ENSHGLG00000016285	-	100	75.458	Heterocephalus_glaber_female
ENSODEG00000004280	PUS3	67	79.751	ENSHGLG00000015753	-	82	79.751	Heterocephalus_glaber_female
ENSODEG00000004280	PUS3	99	84.583	ENSHGLG00000006599	-	97	84.583	Heterocephalus_glaber_female
ENSODEG00000004280	PUS3	100	92.931	ENSHGLG00000000565	PUS3	100	92.931	Heterocephalus_glaber_female
ENSODEG00000004280	PUS3	100	86.279	ENSHGLG00100014825	-	100	86.279	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	99	76.458	ENSHGLG00100007519	-	96	76.250	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	57	77.289	ENSHGLG00100002139	-	100	77.289	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	100	75.468	ENSHGLG00100011339	-	100	75.468	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	65	88.217	ENSHGLG00100008656	-	99	88.217	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	60	81.034	ENSHGLG00100002435	-	100	81.034	Heterocephalus_glaber_male
ENSODEG00000004280	PUS3	88	53.364	ENSHCOG00000015705	pus3	92	53.349	Hippocampus_comes
ENSODEG00000004280	PUS3	88	52.283	ENSIPUG00000000105	pus3	89	52.392	Ictalurus_punctatus
ENSODEG00000004280	PUS3	100	86.486	ENSSTOG00000003721	PUS3	100	86.486	Ictidomys_tridecemlineatus
ENSODEG00000004280	PUS3	100	83.784	ENSJJAG00000011306	Pus3	99	83.784	Jaculus_jaculus
ENSODEG00000004280	PUS3	88	50.769	ENSKMAG00000016715	pus3	91	50.877	Kryptolebias_marmoratus
ENSODEG00000004280	PUS3	89	51.276	ENSLBEG00000004143	pus3	91	51.843	Labrus_bergylta
ENSODEG00000004280	PUS3	96	61.364	ENSLACG00000011161	PUS3	97	61.364	Latimeria_chalumnae
ENSODEG00000004280	PUS3	55	30.479	ENSLACG00000016044	-	80	30.479	Latimeria_chalumnae
ENSODEG00000004280	PUS3	91	51.293	ENSLOCG00000011922	pus3	97	51.293	Lepisosteus_oculatus
ENSODEG00000004280	PUS3	100	84.823	ENSLAFG00000000535	PUS3	100	84.823	Loxodonta_africana
ENSODEG00000004280	PUS3	99	85.535	ENSMFAG00000041002	PUS3	99	85.535	Macaca_fascicularis
ENSODEG00000004280	PUS3	99	85.115	ENSMMUG00000041875	PUS3	99	85.115	Macaca_mulatta
ENSODEG00000004280	PUS3	99	85.325	ENSMNEG00000045347	PUS3	99	85.325	Macaca_nemestrina
ENSODEG00000004280	PUS3	100	85.655	ENSMLEG00000029053	PUS3	100	85.655	Mandrillus_leucophaeus
ENSODEG00000004280	PUS3	88	52.000	ENSMAMG00000016741	pus3	90	53.097	Mastacembelus_armatus
ENSODEG00000004280	PUS3	88	52.232	ENSMZEG00005015950	pus3	91	52.339	Maylandia_zebra
ENSODEG00000004280	PUS3	78	71.164	ENSMGAG00000000851	PUS3	97	71.164	Meleagris_gallopavo
ENSODEG00000004280	PUS3	100	84.855	ENSMAUG00000015873	Pus3	100	84.855	Mesocricetus_auratus
ENSODEG00000004280	PUS3	99	83.542	ENSMICG00000032941	PUS3	99	83.542	Microcebus_murinus
ENSODEG00000004280	PUS3	100	84.440	ENSMOCG00000004901	Pus3	100	84.440	Microtus_ochrogaster
ENSODEG00000004280	PUS3	88	54.186	ENSMMOG00000013909	pus3	89	54.167	Mola_mola
ENSODEG00000004280	PUS3	91	75.168	ENSMODG00000004222	PUS3	99	75.168	Monodelphis_domestica
ENSODEG00000004280	PUS3	88	54.378	ENSMALG00000022420	pus3	90	54.483	Monopterus_albus
ENSODEG00000004280	PUS3	100	84.091	MGP_CAROLIEiJ_G0031957	Pus3	99	86.709	Mus_caroli
ENSODEG00000004280	PUS3	99	83.230	ENSMUSG00000032103	Pus3	99	87.025	Mus_musculus
ENSODEG00000004280	PUS3	100	83.264	MGP_PahariEiJ_G0014822	Pus3	99	86.709	Mus_pahari
ENSODEG00000004280	PUS3	100	83.264	MGP_SPRETEiJ_G0033081	Pus3	99	87.025	Mus_spretus
ENSODEG00000004280	PUS3	99	86.042	ENSMPUG00000006568	PUS3	99	86.042	Mustela_putorius_furo
ENSODEG00000004280	PUS3	100	83.576	ENSMLUG00000030636	PUS3	100	83.576	Myotis_lucifugus
ENSODEG00000004280	PUS3	99	84.583	ENSNGAG00000013868	Pus3	100	84.583	Nannospalax_galili
ENSODEG00000004280	PUS3	88	52.009	ENSNBRG00000015864	pus3	92	52.116	Neolamprologus_brichardi
ENSODEG00000004280	PUS3	100	85.447	ENSNLEG00000007460	PUS3	100	85.447	Nomascus_leucogenys
ENSODEG00000004280	PUS3	98	63.825	ENSMEUG00000014040	PUS3	99	63.825	Notamacropus_eugenii
ENSODEG00000004280	PUS3	100	84.615	ENSOPRG00000007888	-	99	84.615	Ochotona_princeps
ENSODEG00000004280	PUS3	89	52.727	ENSONIG00000016224	pus3	98	52.608	Oreochromis_niloticus
ENSODEG00000004280	PUS3	98	65.895	ENSOANG00000000406	PUS3	98	65.751	Ornithorhynchus_anatinus
ENSODEG00000004280	PUS3	98	83.439	ENSOCUG00000004468	PUS3	93	83.439	Oryctolagus_cuniculus
ENSODEG00000004280	PUS3	88	49.669	ENSORLG00000008445	pus3	91	49.780	Oryzias_latipes
ENSODEG00000004280	PUS3	88	49.446	ENSORLG00020008847	pus3	93	49.134	Oryzias_latipes_hni
ENSODEG00000004280	PUS3	88	48.786	ENSORLG00015007438	pus3	93	48.491	Oryzias_latipes_hsok
ENSODEG00000004280	PUS3	88	52.349	ENSOMEG00000014321	pus3	93	52.288	Oryzias_melastigma
ENSODEG00000004280	PUS3	100	83.784	ENSOGAG00000008913	PUS3	100	83.784	Otolemur_garnettii
ENSODEG00000004280	PUS3	100	85.270	ENSOARG00000011870	PUS3	100	85.270	Ovis_aries
ENSODEG00000004280	PUS3	100	85.447	ENSPPAG00000025809	PUS3	100	85.447	Pan_paniscus
ENSODEG00000004280	PUS3	99	86.042	ENSPPRG00000005662	PUS3	99	86.042	Panthera_pardus
ENSODEG00000004280	PUS3	99	86.250	ENSPTIG00000001192	PUS3	99	86.250	Panthera_tigris_altaica
ENSODEG00000004280	PUS3	100	85.655	ENSPTRG00000004449	PUS3	100	85.655	Pan_troglodytes
ENSODEG00000004280	PUS3	100	85.863	ENSPANG00000013782	PUS3	100	85.863	Papio_anubis
ENSODEG00000004280	PUS3	89	52.980	ENSPKIG00000000646	pus3	92	52.980	Paramormyrops_kingsleyae
ENSODEG00000004280	PUS3	99	66.870	ENSPSIG00000013961	PUS3	99	66.870	Pelodiscus_sinensis
ENSODEG00000004280	PUS3	83	52.580	ENSPMGG00000000911	pus3	90	52.580	Periophthalmus_magnuspinnatus
ENSODEG00000004280	PUS3	100	85.507	ENSPEMG00000009602	Pus3	100	85.507	Peromyscus_maniculatus_bairdii
ENSODEG00000004280	PUS3	98	73.069	ENSPCIG00000010225	PUS3	97	75.281	Phascolarctos_cinereus
ENSODEG00000004280	PUS3	88	54.023	ENSPFOG00000009447	pus3	94	54.023	Poecilia_formosa
ENSODEG00000004280	PUS3	88	51.663	ENSPLAG00000023343	pus3	90	51.663	Poecilia_latipinna
ENSODEG00000004280	PUS3	88	51.663	ENSPMEG00000009870	pus3	90	51.663	Poecilia_mexicana
ENSODEG00000004280	PUS3	61	61.462	ENSPREG00000003179	pus3	57	61.462	Poecilia_reticulata
ENSODEG00000004280	PUS3	100	86.071	ENSPPYG00000004039	PUS3	100	86.071	Pongo_abelii
ENSODEG00000004280	PUS3	99	83.542	ENSPCAG00000000441	PUS3	100	83.542	Procavia_capensis
ENSODEG00000004280	PUS3	99	85.417	ENSPCOG00000019330	PUS3	99	85.417	Propithecus_coquereli
ENSODEG00000004280	PUS3	100	83.576	ENSPVAG00000002606	PUS3	100	83.576	Pteropus_vampyrus
ENSODEG00000004280	PUS3	88	52.009	ENSPNYG00000019615	pus3	91	52.116	Pundamilia_nyererei
ENSODEG00000004280	PUS3	88	54.120	ENSPNAG00000014541	pus3	89	54.222	Pygocentrus_nattereri
ENSODEG00000004280	PUS3	100	81.950	ENSRNOG00000012994	Pus3	100	81.950	Rattus_norvegicus
ENSODEG00000004280	PUS3	100	83.784	ENSRBIG00000044456	PUS3	100	83.784	Rhinopithecus_bieti
ENSODEG00000004280	PUS3	100	84.823	ENSRROG00000035245	PUS3	100	84.823	Rhinopithecus_roxellana
ENSODEG00000004280	PUS3	67	43.713	YFL001W	DEG1	71	43.713	Saccharomyces_cerevisiae
ENSODEG00000004280	PUS3	100	85.000	ENSSBOG00000022433	PUS3	100	85.000	Saimiri_boliviensis_boliviensis
ENSODEG00000004280	PUS3	99	72.107	ENSSHAG00000001382	PUS3	99	72.107	Sarcophilus_harrisii
ENSODEG00000004280	PUS3	88	57.143	ENSSFOG00015004850	pus3	91	57.143	Scleropages_formosus
ENSODEG00000004280	PUS3	88	50.109	ENSSMAG00000020340	pus3	91	50.652	Scophthalmus_maximus
ENSODEG00000004280	PUS3	88	51.441	ENSSDUG00000020825	pus3	90	51.770	Seriola_dumerili
ENSODEG00000004280	PUS3	88	51.441	ENSSLDG00000019932	pus3	90	51.549	Seriola_lalandi_dorsalis
ENSODEG00000004280	PUS3	65	81.529	ENSSARG00000013826	PUS3	100	81.529	Sorex_araneus
ENSODEG00000004280	PUS3	99	67.008	ENSSPUG00000001412	PUS3	99	67.008	Sphenodon_punctatus
ENSODEG00000004280	PUS3	88	53.953	ENSSPAG00000019221	pus3	92	53.828	Stegastes_partitus
ENSODEG00000004280	PUS3	99	85.625	ENSSSCG00000015222	PUS3	100	85.625	Sus_scrofa
ENSODEG00000004280	PUS3	91	67.421	ENSTGUG00000000778	-	100	67.421	Taeniopygia_guttata
ENSODEG00000004280	PUS3	88	49.776	ENSTRUG00000013050	pus3	95	49.776	Takifugu_rubripes
ENSODEG00000004280	PUS3	95	47.059	ENSTNIG00000004929	PUS3	98	47.059	Tetraodon_nigroviridis
ENSODEG00000004280	PUS3	76	51.399	ENSTNIG00000010307	pus3	93	51.399	Tetraodon_nigroviridis
ENSODEG00000004280	PUS3	95	75.711	ENSTBEG00000004382	PUS3	100	75.711	Tupaia_belangeri
ENSODEG00000004280	PUS3	100	87.526	ENSTTRG00000012167	PUS3	100	87.526	Tursiops_truncatus
ENSODEG00000004280	PUS3	99	86.250	ENSUAMG00000009297	PUS3	99	86.250	Ursus_americanus
ENSODEG00000004280	PUS3	99	86.458	ENSUMAG00000001795	PUS3	99	86.458	Ursus_maritimus
ENSODEG00000004280	PUS3	99	85.417	ENSVPAG00000001495	PUS3	99	85.417	Vicugna_pacos
ENSODEG00000004280	PUS3	99	85.833	ENSVVUG00000020152	PUS3	99	85.833	Vulpes_vulpes
ENSODEG00000004280	PUS3	89	58.199	ENSXETG00000024532	pus3	81	58.199	Xenopus_tropicalis
ENSODEG00000004280	PUS3	52	60.938	ENSXMAG00000028945	pus3	84	60.938	Xiphophorus_maculatus
ENSODEG00000004280	PUS3	70	54.942	ENSXMAG00000025077	pus3	78	54.942	Xiphophorus_maculatus
ENSODEG00000004280	PUS3	70	54.783	ENSXMAG00000029934	pus3	78	54.783	Xiphophorus_maculatus
ENSODEG00000004280	PUS3	52	60.938	ENSXMAG00000025146	pus3	78	60.938	Xiphophorus_maculatus
ENSODEG00000004280	PUS3	70	54.942	ENSXMAG00000025659	PUS3	52	57.692	Xiphophorus_maculatus
ENSODEG00000004280	PUS3	92	50.885	ENSXMAG00000028016	pus3	95	50.885	Xiphophorus_maculatus