EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004289 (Gene tree)
Gene ID: 101582445
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 22598 bases
Position: chrJH651802.1:1146334-1168931
Accession: 101582445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005692	Mago-bind	PF09282.10	7e-14	1	1
ENSODEP00000005693	Mago-bind	PF09282.10	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005792	PYM1-202	612	-	ENSODEP00000005693	203 (aa)	-	-
ENSODET00000005791	PYM1-201	612	XM_004647117	ENSODEP00000005692	203 (aa)	XP_004647174	UPI0003338D45

Gene Model

Click here to download ENSODEG00000004289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004289	PYM1	94	94.241	ENSG00000170473	PYM1	94	94.241	Homo_sapiens
ENSODEG00000004289	PYM1	99	58.411	ENSAPOG00000023045	pym1	94	58.537	Acanthochromis_polyacanthus
ENSODEG00000004289	PYM1	93	88.830	ENSAMEG00000003091	PYM1	94	88.360	Ailuropoda_melanoleuca
ENSODEG00000004289	PYM1	99	59.722	ENSACIG00000012769	pym1	94	59.420	Amphilophus_citrinellus
ENSODEG00000004289	PYM1	99	57.346	ENSAOCG00000021358	pym1	94	58.824	Amphiprion_ocellaris
ENSODEG00000004289	PYM1	99	57.346	ENSAPEG00000022679	pym1	94	58.824	Amphiprion_percula
ENSODEG00000004289	PYM1	99	56.542	ENSATEG00000024022	pym1	94	60.099	Anabas_testudineus
ENSODEG00000004289	PYM1	94	69.756	ENSACAG00000005714	PYM1	94	69.756	Anolis_carolinensis
ENSODEG00000004289	PYM1	94	93.194	ENSANAG00000036967	PYM1	94	93.194	Aotus_nancymaae
ENSODEG00000004289	PYM1	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSODEG00000004289	PYM1	94	92.147	ENSBTAG00000031146	PYM1	94	92.147	Bos_taurus
ENSODEG00000004289	PYM1	94	93.194	ENSCJAG00000041077	PYM1	94	93.194	Callithrix_jacchus
ENSODEG00000004289	PYM1	94	93.717	ENSCAFG00000000076	PYM1	94	93.717	Canis_familiaris
ENSODEG00000004289	PYM1	94	93.717	ENSCAFG00020026099	PYM1	94	93.717	Canis_lupus_dingo
ENSODEG00000004289	PYM1	94	89.529	ENSCHIG00000026207	PYM1	94	89.529	Capra_hircus
ENSODEG00000004289	PYM1	94	91.623	ENSTSYG00000000787	PYM1	94	91.623	Carlito_syrichta
ENSODEG00000004289	PYM1	88	94.972	ENSCAPG00000010374	PYM1	94	94.972	Cavia_aperea
ENSODEG00000004289	PYM1	94	95.288	ENSCPOG00000031546	PYM1	94	95.288	Cavia_porcellus
ENSODEG00000004289	PYM1	94	93.717	ENSCCAG00000026187	PYM1	94	93.717	Cebus_capucinus
ENSODEG00000004289	PYM1	94	94.241	ENSCATG00000018801	PYM1	94	94.241	Cercocebus_atys
ENSODEG00000004289	PYM1	94	92.147	ENSCLAG00000007964	PYM1	94	92.147	Chinchilla_lanigera
ENSODEG00000004289	PYM1	89	93.889	ENSCSAG00000005291	PYM1	92	93.889	Chlorocebus_sabaeus
ENSODEG00000004289	PYM1	98	40.376	ENSCING00000006448	-	93	41.709	Ciona_intestinalis
ENSODEG00000004289	PYM1	98	35.681	ENSCSAVG00000009805	-	89	41.089	Ciona_savignyi
ENSODEG00000004289	PYM1	94	94.241	ENSCANG00000020338	-	94	94.241	Colobus_angolensis_palliatus
ENSODEG00000004289	PYM1	98	86.869	ENSCANG00000019757	-	86	91.579	Colobus_angolensis_palliatus
ENSODEG00000004289	PYM1	93	70.526	ENSCGRG00001004231	-	93	71.728	Cricetulus_griseus_chok1gshd
ENSODEG00000004289	PYM1	94	89.005	ENSCGRG00001018051	-	94	89.005	Cricetulus_griseus_chok1gshd
ENSODEG00000004289	PYM1	93	70.526	ENSCGRG00000018933	-	93	71.728	Cricetulus_griseus_crigri
ENSODEG00000004289	PYM1	94	89.005	ENSCGRG00000012495	-	94	89.005	Cricetulus_griseus_crigri
ENSODEG00000004289	PYM1	94	54.680	ENSCSEG00000021531	pym1	94	57.635	Cynoglossus_semilaevis
ENSODEG00000004289	PYM1	94	58.209	ENSCVAG00000017360	pym1	81	57.292	Cyprinodon_variegatus
ENSODEG00000004289	PYM1	99	58.500	ENSDARG00000046024	pym1	94	57.949	Danio_rerio
ENSODEG00000004289	PYM1	94	91.099	ENSDNOG00000048414	PYM1	86	91.099	Dasypus_novemcinctus
ENSODEG00000004289	PYM1	94	92.147	ENSDORG00000029448	Pym1	94	92.147	Dipodomys_ordii
ENSODEG00000004289	PYM1	98	30.317	FBgn0034918	Pym	92	30.952	Drosophila_melanogaster
ENSODEG00000004289	PYM1	89	85.556	ENSETEG00000004461	-	94	85.556	Echinops_telfairi
ENSODEG00000004289	PYM1	93	88.830	ENSEASG00005002271	PYM1	85	88.830	Equus_asinus_asinus
ENSODEG00000004289	PYM1	94	93.194	ENSECAG00000011870	PYM1	94	93.194	Equus_caballus
ENSODEG00000004289	PYM1	96	57.214	ENSELUG00000024250	pym1	94	57.576	Esox_lucius
ENSODEG00000004289	PYM1	94	93.194	ENSFCAG00000013967	PYM1	94	93.194	Felis_catus
ENSODEG00000004289	PYM1	94	94.764	ENSFDAG00000006314	PYM1	94	94.764	Fukomys_damarensis
ENSODEG00000004289	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSODEG00000004289	PYM1	94	56.000	ENSGMOG00000007239	pym1	93	56.000	Gadus_morhua
ENSODEG00000004289	PYM1	94	71.282	ENSGALG00000046169	PYM1	94	71.282	Gallus_gallus
ENSODEG00000004289	PYM1	99	58.685	ENSGAFG00000003280	pym1	93	58.706	Gambusia_affinis
ENSODEG00000004289	PYM1	100	55.340	ENSGACG00000010703	pym1	94	55.385	Gasterosteus_aculeatus
ENSODEG00000004289	PYM1	94	62.069	ENSGAGG00000001973	PYM1	88	63.861	Gopherus_agassizii
ENSODEG00000004289	PYM1	94	93.717	ENSGGOG00000043246	PYM1	94	93.717	Gorilla_gorilla
ENSODEG00000004289	PYM1	94	59.314	ENSHBUG00000012719	pym1	94	60.294	Haplochromis_burtoni
ENSODEG00000004289	PYM1	94	95.288	ENSHGLG00000017155	PYM1	94	95.288	Heterocephalus_glaber_female
ENSODEG00000004289	PYM1	94	95.288	ENSHGLG00100015341	PYM1	94	95.288	Heterocephalus_glaber_male
ENSODEG00000004289	PYM1	99	57.009	ENSHCOG00000007987	pym1	80	57.426	Hippocampus_comes
ENSODEG00000004289	PYM1	100	58.525	ENSIPUG00000005975	wibga	94	58.537	Ictalurus_punctatus
ENSODEG00000004289	PYM1	94	94.764	ENSSTOG00000014206	PYM1	94	94.764	Ictidomys_tridecemlineatus
ENSODEG00000004289	PYM1	94	90.576	ENSJJAG00000013338	Pym1	94	90.576	Jaculus_jaculus
ENSODEG00000004289	PYM1	99	56.951	ENSKMAG00000006351	pym1	95	56.542	Kryptolebias_marmoratus
ENSODEG00000004289	PYM1	99	59.615	ENSLBEG00000015707	pym1	94	59.296	Labrus_bergylta
ENSODEG00000004289	PYM1	89	59.686	ENSLACG00000014398	PYM1	90	59.067	Latimeria_chalumnae
ENSODEG00000004289	PYM1	94	90.576	ENSLAFG00000002369	PYM1	94	90.576	Loxodonta_africana
ENSODEG00000004289	PYM1	94	94.241	ENSMFAG00000003048	PYM1	94	94.241	Macaca_fascicularis
ENSODEG00000004289	PYM1	94	94.241	ENSMMUG00000011002	PYM1	94	94.241	Macaca_mulatta
ENSODEG00000004289	PYM1	94	94.241	ENSMNEG00000034677	PYM1	94	94.241	Macaca_nemestrina
ENSODEG00000004289	PYM1	94	94.241	ENSMLEG00000007971	PYM1	94	94.241	Mandrillus_leucophaeus
ENSODEG00000004289	PYM1	99	56.250	ENSMAMG00000001588	pym1	94	57.674	Mastacembelus_armatus
ENSODEG00000004289	PYM1	94	58.824	ENSMZEG00005026458	pym1	94	59.804	Maylandia_zebra
ENSODEG00000004289	PYM1	94	89.529	ENSMAUG00000007318	Pym1	94	89.529	Mesocricetus_auratus
ENSODEG00000004289	PYM1	94	95.288	ENSMICG00000032962	PYM1	94	95.288	Microcebus_murinus
ENSODEG00000004289	PYM1	94	87.435	ENSMOCG00000010208	Pym1	94	87.435	Microtus_ochrogaster
ENSODEG00000004289	PYM1	99	57.561	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSODEG00000004289	PYM1	99	59.048	ENSMALG00000013496	pym1	94	60.294	Monopterus_albus
ENSODEG00000004289	PYM1	94	90.052	MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	Mus_caroli
ENSODEG00000004289	PYM1	94	90.576	ENSMUSG00000064030	Pym1	94	90.576	Mus_musculus
ENSODEG00000004289	PYM1	94	88.482	MGP_PahariEiJ_G0031131	Pym1	94	88.482	Mus_pahari
ENSODEG00000004289	PYM1	94	90.576	MGP_SPRETEiJ_G0016778	Pym1	94	90.576	Mus_spretus
ENSODEG00000004289	PYM1	94	93.194	ENSMPUG00000000931	PYM1	94	93.194	Mustela_putorius_furo
ENSODEG00000004289	PYM1	94	85.864	ENSMLUG00000003586	PYM1	94	85.864	Myotis_lucifugus
ENSODEG00000004289	PYM1	89	92.778	ENSNGAG00000019207	Pym1	88	91.758	Nannospalax_galili
ENSODEG00000004289	PYM1	99	60.094	ENSNBRG00000006951	pym1	94	60.294	Neolamprologus_brichardi
ENSODEG00000004289	PYM1	94	94.241	ENSNLEG00000017588	PYM1	94	94.241	Nomascus_leucogenys
ENSODEG00000004289	PYM1	88	80.337	ENSMEUG00000001017	PYM1	93	80.226	Notamacropus_eugenii
ENSODEG00000004289	PYM1	92	87.097	ENSOPRG00000007797	PYM1	91	87.097	Ochotona_princeps
ENSODEG00000004289	PYM1	94	58.454	ENSONIG00000016740	pym1	94	59.420	Oreochromis_niloticus
ENSODEG00000004289	PYM1	89	91.111	ENSOCUG00000025969	PYM1	81	91.111	Oryctolagus_cuniculus
ENSODEG00000004289	PYM1	99	63.158	ENSORLG00000030592	pym1	94	62.814	Oryzias_latipes
ENSODEG00000004289	PYM1	99	62.559	ENSORLG00020011264	pym1	94	62.687	Oryzias_latipes_hni
ENSODEG00000004289	PYM1	99	63.942	ENSORLG00015005287	pym1	94	63.636	Oryzias_latipes_hsok
ENSODEG00000004289	PYM1	99	64.251	ENSOMEG00000022250	pym1	94	63.636	Oryzias_melastigma
ENSODEG00000004289	PYM1	91	90.761	ENSOGAG00000007038	PYM1	90	90.761	Otolemur_garnettii
ENSODEG00000004289	PYM1	94	90.052	ENSOARG00000010856	PYM1	94	90.052	Ovis_aries
ENSODEG00000004289	PYM1	94	94.241	ENSPPAG00000043630	PYM1	94	94.241	Pan_paniscus
ENSODEG00000004289	PYM1	94	91.623	ENSPPRG00000013243	PYM1	94	91.623	Panthera_pardus
ENSODEG00000004289	PYM1	94	91.623	ENSPTIG00000017380	PYM1	94	91.623	Panthera_tigris_altaica
ENSODEG00000004289	PYM1	94	94.241	ENSPTRG00000005067	PYM1	94	94.241	Pan_troglodytes
ENSODEG00000004289	PYM1	94	93.717	ENSPANG00000009562	PYM1	94	93.717	Papio_anubis
ENSODEG00000004289	PYM1	100	60.563	ENSPKIG00000006301	pym1	94	59.701	Paramormyrops_kingsleyae
ENSODEG00000004289	PYM1	92	62.121	ENSPSIG00000003043	PYM1	92	62.755	Pelodiscus_sinensis
ENSODEG00000004289	PYM1	100	61.244	ENSPMGG00000023161	pym1	94	61.421	Periophthalmus_magnuspinnatus
ENSODEG00000004289	PYM1	94	88.482	ENSPEMG00000009372	Pym1	94	88.482	Peromyscus_maniculatus_bairdii
ENSODEG00000004289	PYM1	92	79.570	ENSPCIG00000024658	PYM1	91	79.255	Phascolarctos_cinereus
ENSODEG00000004289	PYM1	99	59.716	ENSPFOG00000008193	pym1	93	59.799	Poecilia_formosa
ENSODEG00000004289	PYM1	99	59.070	ENSPLAG00000009228	pym1	93	58.794	Poecilia_latipinna
ENSODEG00000004289	PYM1	99	59.070	ENSPMEG00000001505	pym1	93	59.606	Poecilia_mexicana
ENSODEG00000004289	PYM1	89	92.222	ENSPPYG00000004635	PYM1	92	92.222	Pongo_abelii
ENSODEG00000004289	PYM1	94	93.717	ENSPCOG00000019706	PYM1	94	93.717	Propithecus_coquereli
ENSODEG00000004289	PYM1	89	93.333	ENSPVAG00000011437	PYM1	92	93.333	Pteropus_vampyrus
ENSODEG00000004289	PYM1	94	60.591	ENSPNYG00000012871	pym1	94	60.099	Pundamilia_nyererei
ENSODEG00000004289	PYM1	99	59.174	ENSPNAG00000018833	pym1	94	59.809	Pygocentrus_nattereri
ENSODEG00000004289	PYM1	94	83.333	ENSRNOG00000058130	Pym1	94	83.333	Rattus_norvegicus
ENSODEG00000004289	PYM1	92	66.845	ENSRNOG00000049415	AABR07055413.1	91	61.702	Rattus_norvegicus
ENSODEG00000004289	PYM1	94	89.529	ENSRBIG00000033362	PYM1	94	89.529	Rhinopithecus_bieti
ENSODEG00000004289	PYM1	94	94.241	ENSRROG00000043620	PYM1	94	94.241	Rhinopithecus_roxellana
ENSODEG00000004289	PYM1	94	93.717	ENSSBOG00000029393	PYM1	94	93.717	Saimiri_boliviensis_boliviensis
ENSODEG00000004289	PYM1	93	82.011	ENSSHAG00000008280	PYM1	93	82.011	Sarcophilus_harrisii
ENSODEG00000004289	PYM1	93	63.402	ENSSFOG00015021475	pym1	94	62.944	Scleropages_formosus
ENSODEG00000004289	PYM1	99	57.820	ENSSMAG00000020912	pym1	94	59.406	Scophthalmus_maximus
ENSODEG00000004289	PYM1	99	55.814	ENSSDUG00000001807	pym1	94	58.937	Seriola_dumerili
ENSODEG00000004289	PYM1	99	60.000	ENSSLDG00000013730	pym1	94	62.437	Seriola_lalandi_dorsalis
ENSODEG00000004289	PYM1	89	87.778	ENSSARG00000009569	PYM1	94	87.778	Sorex_araneus
ENSODEG00000004289	PYM1	92	62.121	ENSSPUG00000015059	PYM1	92	62.121	Sphenodon_punctatus
ENSODEG00000004289	PYM1	99	57.009	ENSSPAG00000020100	pym1	94	58.252	Stegastes_partitus
ENSODEG00000004289	PYM1	94	91.623	ENSSSCG00000040825	PYM1	94	91.623	Sus_scrofa
ENSODEG00000004289	PYM1	99	58.654	ENSTRUG00000021367	pym1	93	59.694	Takifugu_rubripes
ENSODEG00000004289	PYM1	99	54.091	ENSTNIG00000012534	pym1	92	55.340	Tetraodon_nigroviridis
ENSODEG00000004289	PYM1	89	85.556	ENSTBEG00000004208	PYM1	94	85.556	Tupaia_belangeri
ENSODEG00000004289	PYM1	93	87.831	ENSTTRG00000014971	PYM1	92	91.667	Tursiops_truncatus
ENSODEG00000004289	PYM1	94	91.099	ENSUAMG00000014521	PYM1	94	91.099	Ursus_americanus
ENSODEG00000004289	PYM1	91	88.108	ENSUMAG00000016241	PYM1	84	88.108	Ursus_maritimus
ENSODEG00000004289	PYM1	94	93.194	ENSVVUG00000022749	PYM1	94	93.194	Vulpes_vulpes
ENSODEG00000004289	PYM1	94	64.103	ENSXETG00000021850	pym1	94	64.103	Xenopus_tropicalis
ENSODEG00000004289	PYM1	99	58.768	ENSXMAG00000011649	pym1	93	58.794	Xiphophorus_maculatus