EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004347 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1786 bases
Position: chrJH651606.1:5220262-5222047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005776	RRM_1	PF00076.22	7.3e-35	1	3
ENSODEP00000005776	RRM_1	PF00076.22	7.3e-35	2	3
ENSODEP00000005776	RRM_1	PF00076.22	7.3e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005875	-	1722	-	ENSODEP00000005776	573 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004347	-	100	72.038	ENSODEG00000011442	-	91	72.986
ENSODEG00000004347	-	97	80.244	ENSODEG00000010314	-	90	70.159
ENSODEG00000004347	-	100	71.406	ENSODEG00000009194	-	91	70.505
ENSODEG00000004347	-	79	51.244	ENSODEG00000007463	MYEF2	89	51.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004347	-	100	83.728	ENSG00000099783	HNRNPM	84	93.548	Homo_sapiens
ENSODEG00000004347	-	99	62.000	ENSAPOG00000001463	hnrnpm	84	60.784	Acanthochromis_polyacanthus
ENSODEG00000004347	-	100	78.720	ENSAMEG00000004979	HNRNPM	92	78.720	Ailuropoda_melanoleuca
ENSODEG00000004347	-	99	66.000	ENSACIG00000011870	hnrnpm	85	65.347	Amphilophus_citrinellus
ENSODEG00000004347	-	99	68.317	ENSAOCG00000008519	hnrnpm	88	68.317	Amphiprion_ocellaris
ENSODEG00000004347	-	99	69.307	ENSAPEG00000004257	hnrnpm	85	69.307	Amphiprion_percula
ENSODEG00000004347	-	99	64.356	ENSATEG00000008976	hnrnpm	86	64.356	Anabas_testudineus
ENSODEG00000004347	-	100	59.416	ENSAPLG00000010149	HNRNPM	97	56.997	Anas_platyrhynchos
ENSODEG00000004347	-	100	79.562	ENSANAG00000019489	-	87	71.669	Aotus_nancymaae
ENSODEG00000004347	-	100	83.570	ENSANAG00000025358	HNRNPM	100	77.425	Aotus_nancymaae
ENSODEG00000004347	-	99	65.347	ENSACLG00000020495	hnrnpm	87	65.347	Astatotilapia_calliptera
ENSODEG00000004347	-	99	65.421	ENSAMXG00000016073	hnrnpm	85	65.421	Astyanax_mexicanus
ENSODEG00000004347	-	100	83.254	ENSBTAG00000021039	HNRNPM	92	83.254	Bos_taurus
ENSODEG00000004347	-	65	51.546	ENSBTAG00000048355	-	100	48.438	Bos_taurus
ENSODEG00000004347	-	100	83.096	ENSCJAG00000010802	HNRNPM	94	80.885	Callithrix_jacchus
ENSODEG00000004347	-	100	83.254	ENSCAFG00000018524	HNRNPM	85	83.254	Canis_familiaris
ENSODEG00000004347	-	98	78.146	ENSCAFG00020022128	HNRNPM	100	78.146	Canis_lupus_dingo
ENSODEG00000004347	-	100	83.254	ENSCHIG00000026313	HNRNPM	92	83.254	Capra_hircus
ENSODEG00000004347	-	98	77.393	ENSTSYG00000037074	-	89	77.393	Carlito_syrichta
ENSODEG00000004347	-	100	70.890	ENSTSYG00000030502	-	93	72.089	Carlito_syrichta
ENSODEG00000004347	-	100	83.570	ENSTSYG00000011487	-	92	83.570	Carlito_syrichta
ENSODEG00000004347	-	96	75.000	ENSCAPG00000011505	HNRNPM	93	73.284	Cavia_aperea
ENSODEG00000004347	-	100	84.202	ENSCPOG00000015182	HNRNPM	92	84.202	Cavia_porcellus
ENSODEG00000004347	-	88	74.688	ENSCCAG00000018580	-	100	74.688	Cebus_capucinus
ENSODEG00000004347	-	100	80.449	ENSCCAG00000018782	HNRNPM	100	77.465	Cebus_capucinus
ENSODEG00000004347	-	100	83.728	ENSCATG00000035478	HNRNPM	92	83.728	Cercocebus_atys
ENSODEG00000004347	-	100	84.202	ENSCLAG00000011194	-	92	84.202	Chinchilla_lanigera
ENSODEG00000004347	-	100	65.127	ENSCLAG00000003049	-	91	64.286	Chinchilla_lanigera
ENSODEG00000004347	-	100	79.370	ENSCSAG00000008009	HNRNPM	92	79.370	Chlorocebus_sabaeus
ENSODEG00000004347	-	100	78.125	ENSCHOG00000013627	HNRNPM	92	78.125	Choloepus_hoffmanni
ENSODEG00000004347	-	98	61.085	ENSCPBG00000017052	-	100	60.925	Chrysemys_picta_bellii
ENSODEG00000004347	-	62	75.079	ENSCANG00000041671	-	99	68.207	Colobus_angolensis_palliatus
ENSODEG00000004347	-	100	85.484	ENSCANG00000043491	HNRNPM	96	85.484	Colobus_angolensis_palliatus
ENSODEG00000004347	-	100	66.829	ENSCGRG00001008003	-	93	66.181	Cricetulus_griseus_chok1gshd
ENSODEG00000004347	-	100	77.266	ENSCGRG00001022655	-	91	76.000	Cricetulus_griseus_chok1gshd
ENSODEG00000004347	-	100	60.227	ENSCGRG00001004249	-	93	58.871	Cricetulus_griseus_chok1gshd
ENSODEG00000004347	-	84	77.802	ENSCGRG00001012021	-	83	74.844	Cricetulus_griseus_chok1gshd
ENSODEG00000004347	-	98	70.328	ENSCGRG00001004486	-	90	70.328	Cricetulus_griseus_chok1gshd
ENSODEG00000004347	-	100	81.991	ENSCGRG00000012441	-	92	81.991	Cricetulus_griseus_crigri
ENSODEG00000004347	-	100	66.829	ENSCGRG00000012006	-	93	66.181	Cricetulus_griseus_crigri
ENSODEG00000004347	-	90	80.431	ENSCGRG00000010065	-	84	80.072	Cricetulus_griseus_crigri
ENSODEG00000004347	-	98	70.328	ENSCGRG00000003596	-	90	70.328	Cricetulus_griseus_crigri
ENSODEG00000004347	-	99	66.337	ENSCSEG00000014980	hnrnpm	84	66.337	Cynoglossus_semilaevis
ENSODEG00000004347	-	99	64.356	ENSCVAG00000020838	hnrnpm	84	64.356	Cyprinodon_variegatus
ENSODEG00000004347	-	99	68.000	ENSDARG00000061735	hnrnpm	83	67.327	Danio_rerio
ENSODEG00000004347	-	100	82.780	ENSDNOG00000012157	HNRNPM	84	82.780	Dasypus_novemcinctus
ENSODEG00000004347	-	100	83.412	ENSDORG00000008105	Hnrnpm	92	83.412	Dipodomys_ordii
ENSODEG00000004347	-	100	74.851	ENSETEG00000019712	HNRNPM	92	74.851	Echinops_telfairi
ENSODEG00000004347	-	100	83.254	ENSEASG00005022434	HNRNPM	84	83.254	Equus_asinus_asinus
ENSODEG00000004347	-	100	83.254	ENSECAG00000023868	HNRNPM	84	83.254	Equus_caballus
ENSODEG00000004347	-	62	72.727	ENSEEUG00000001929	-	62	72.727	Erinaceus_europaeus
ENSODEG00000004347	-	99	68.317	ENSELUG00000021183	hnrnpm	85	68.317	Esox_lucius
ENSODEG00000004347	-	100	76.842	ENSFCAG00000015218	HNRNPM	92	73.353	Felis_catus
ENSODEG00000004347	-	98	64.846	ENSFALG00000001059	HNRNPM	100	64.906	Ficedula_albicollis
ENSODEG00000004347	-	100	83.943	ENSFDAG00000014680	HNRNPM	92	83.943	Fukomys_damarensis
ENSODEG00000004347	-	99	68.317	ENSFHEG00000006712	hnrnpm	81	68.317	Fundulus_heteroclitus
ENSODEG00000004347	-	99	45.568	ENSGMOG00000009724	hnrnpm	96	45.595	Gadus_morhua
ENSODEG00000004347	-	100	59.384	ENSGALG00000000377	HNRNPM	91	59.238	Gallus_gallus
ENSODEG00000004347	-	99	66.337	ENSGAFG00000013798	hnrnpm	86	64.762	Gambusia_affinis
ENSODEG00000004347	-	99	48.024	ENSGACG00000010265	hnrnpm	98	47.583	Gasterosteus_aculeatus
ENSODEG00000004347	-	98	60.925	ENSGAGG00000019124	-	100	60.447	Gopherus_agassizii
ENSODEG00000004347	-	100	83.728	ENSGGOG00000003498	HNRNPM	92	83.728	Gorilla_gorilla
ENSODEG00000004347	-	99	65.347	ENSHBUG00000023451	hnrnpm	87	65.347	Haplochromis_burtoni
ENSODEG00000004347	-	100	79.779	ENSHGLG00000009796	-	90	81.109	Heterocephalus_glaber_female
ENSODEG00000004347	-	100	85.323	ENSHGLG00100006675	-	91	85.323	Heterocephalus_glaber_male
ENSODEG00000004347	-	99	46.456	ENSHCOG00000019984	hnrnpm	96	46.061	Hippocampus_comes
ENSODEG00000004347	-	99	47.872	ENSIPUG00000025097	hnrnpm	93	47.933	Ictalurus_punctatus
ENSODEG00000004347	-	100	83.570	ENSSTOG00000008112	HNRNPM	92	83.570	Ictidomys_tridecemlineatus
ENSODEG00000004347	-	100	82.306	ENSJJAG00000017319	Hnrnpm	92	82.306	Jaculus_jaculus
ENSODEG00000004347	-	99	67.327	ENSKMAG00000022136	hnrnpm	83	67.327	Kryptolebias_marmoratus
ENSODEG00000004347	-	73	67.327	ENSLBEG00000004545	hnrnpm	84	67.327	Labrus_bergylta
ENSODEG00000004347	-	99	46.213	ENSLACG00000016814	HNRNPM	98	43.609	Latimeria_chalumnae
ENSODEG00000004347	-	100	48.926	ENSLOCG00000004456	hnrnpm	95	49.323	Lepisosteus_oculatus
ENSODEG00000004347	-	100	76.374	ENSLAFG00000013603	HNRNPM	92	76.374	Loxodonta_africana
ENSODEG00000004347	-	100	83.728	ENSMFAG00000037617	HNRNPM	92	83.728	Macaca_fascicularis
ENSODEG00000004347	-	100	83.412	ENSMMUG00000018806	HNRNPM	84	93.548	Macaca_mulatta
ENSODEG00000004347	-	100	83.412	ENSMNEG00000036546	HNRNPM	92	83.412	Macaca_nemestrina
ENSODEG00000004347	-	100	83.728	ENSMLEG00000042113	HNRNPM	92	83.728	Mandrillus_leucophaeus
ENSODEG00000004347	-	99	68.317	ENSMAMG00000005612	hnrnpm	82	68.317	Mastacembelus_armatus
ENSODEG00000004347	-	99	68.317	ENSMZEG00005002512	hnrnpm	84	68.317	Maylandia_zebra
ENSODEG00000004347	-	100	64.487	ENSMGAG00000000700	HNRNPM	97	64.339	Meleagris_gallopavo
ENSODEG00000004347	-	100	83.412	ENSMAUG00000017476	Hnrnpm	92	83.412	Mesocricetus_auratus
ENSODEG00000004347	-	100	81.043	ENSMICG00000002532	-	99	75.563	Microcebus_murinus
ENSODEG00000004347	-	100	82.097	ENSMICG00000028503	-	100	78.339	Microcebus_murinus
ENSODEG00000004347	-	100	83.254	ENSMOCG00000005769	Hnrnpm	92	83.254	Microtus_ochrogaster
ENSODEG00000004347	-	99	44.444	ENSMMOG00000019610	hnrnpm	94	45.098	Mola_mola
ENSODEG00000004347	-	100	70.414	ENSMODG00000003801	-	92	70.266	Monodelphis_domestica
ENSODEG00000004347	-	93	71.127	ENSMODG00000003473	-	91	71.655	Monodelphis_domestica
ENSODEG00000004347	-	99	66.337	ENSMALG00000014280	hnrnpm	86	66.337	Monopterus_albus
ENSODEG00000004347	-	100	83.254	MGP_CAROLIEiJ_G0021413	Hnrnpm	95	88.333	Mus_caroli
ENSODEG00000004347	-	100	82.780	ENSMUSG00000059208	Hnrnpm	95	85.537	Mus_musculus
ENSODEG00000004347	-	100	83.254	MGP_PahariEiJ_G0020418	Hnrnpm	92	83.254	Mus_pahari
ENSODEG00000004347	-	100	82.938	MGP_SPRETEiJ_G0022325	Hnrnpm	95	85.537	Mus_spretus
ENSODEG00000004347	-	100	77.614	ENSMPUG00000007241	HNRNPM	85	77.614	Mustela_putorius_furo
ENSODEG00000004347	-	100	83.254	ENSMLUG00000006696	-	90	83.254	Myotis_lucifugus
ENSODEG00000004347	-	100	83.096	ENSNGAG00000003707	Hnrnpm	92	83.096	Nannospalax_galili
ENSODEG00000004347	-	100	64.356	ENSNGAG00000017657	-	94	64.356	Nannospalax_galili
ENSODEG00000004347	-	99	65.347	ENSNBRG00000015999	hnrnpm	86	65.347	Neolamprologus_brichardi
ENSODEG00000004347	-	100	68.101	ENSMEUG00000004789	HNRNPM	92	67.359	Notamacropus_eugenii
ENSODEG00000004347	-	92	65.142	ENSOPRG00000001943	HNRNPM	69	76.371	Ochotona_princeps
ENSODEG00000004347	-	98	73.333	ENSONIG00000001758	hnrnpm	83	68.317	Oreochromis_niloticus
ENSODEG00000004347	-	95	68.680	ENSOANG00000010259	HNRNPM	100	68.009	Ornithorhynchus_anatinus
ENSODEG00000004347	-	55	74.809	ENSOCUG00000023204	-	99	74.809	Oryctolagus_cuniculus
ENSODEG00000004347	-	100	80.095	ENSOCUG00000000552	-	90	81.833	Oryctolagus_cuniculus
ENSODEG00000004347	-	100	76.312	ENSOCUG00000024611	-	89	76.312	Oryctolagus_cuniculus
ENSODEG00000004347	-	99	60.396	ENSORLG00000005400	hnrnpm	86	60.396	Oryzias_latipes
ENSODEG00000004347	-	99	60.396	ENSORLG00020022108	hnrnpm	87	60.396	Oryzias_latipes_hni
ENSODEG00000004347	-	99	60.396	ENSORLG00015019809	hnrnpm	85	60.396	Oryzias_latipes_hsok
ENSODEG00000004347	-	99	67.327	ENSOMEG00000013075	hnrnpm	83	67.327	Oryzias_melastigma
ENSODEG00000004347	-	100	83.728	ENSOGAG00000030987	HNRNPM	90	83.728	Otolemur_garnettii
ENSODEG00000004347	-	52	73.115	ENSOGAG00000032900	-	83	73.115	Otolemur_garnettii
ENSODEG00000004347	-	100	83.123	ENSOARG00000003961	HNRNPM	91	81.201	Ovis_aries
ENSODEG00000004347	-	100	80.885	ENSPPAG00000039365	HNRNPM	91	80.630	Pan_paniscus
ENSODEG00000004347	-	100	83.570	ENSPPRG00000009284	HNRNPM	92	83.570	Panthera_pardus
ENSODEG00000004347	-	100	83.548	ENSPTIG00000003024	HNRNPM	91	83.548	Panthera_tigris_altaica
ENSODEG00000004347	-	100	80.885	ENSPTRG00000010424	HNRNPM	91	80.630	Pan_troglodytes
ENSODEG00000004347	-	100	83.728	ENSPANG00000000283	HNRNPM	92	83.728	Papio_anubis
ENSODEG00000004347	-	99	49.153	ENSPKIG00000001332	hnrnpm	95	47.768	Paramormyrops_kingsleyae
ENSODEG00000004347	-	100	58.944	ENSPSIG00000011477	HNRNPM	97	58.651	Pelodiscus_sinensis
ENSODEG00000004347	-	99	62.136	ENSPMGG00000012793	hnrnpm	85	62.745	Periophthalmus_magnuspinnatus
ENSODEG00000004347	-	100	83.254	ENSPEMG00000009260	Hnrnpm	92	83.254	Peromyscus_maniculatus_bairdii
ENSODEG00000004347	-	98	71.769	ENSPCIG00000020115	HNRNPM	100	71.477	Phascolarctos_cinereus
ENSODEG00000004347	-	98	60.000	ENSPFOG00000013612	hnrnpm	89	63.889	Poecilia_formosa
ENSODEG00000004347	-	99	65.714	ENSPREG00000016114	hnrnpm	84	65.714	Poecilia_reticulata
ENSODEG00000004347	-	100	83.728	ENSPPYG00000009506	HNRNPM	92	83.728	Pongo_abelii
ENSODEG00000004347	-	100	77.381	ENSPCAG00000009678	HNRNPM	92	77.381	Procavia_capensis
ENSODEG00000004347	-	100	82.780	ENSPCOG00000020227	HNRNPM	100	75.661	Propithecus_coquereli
ENSODEG00000004347	-	90	79.201	ENSPVAG00000009647	HNRNPM	91	73.013	Pteropus_vampyrus
ENSODEG00000004347	-	99	65.347	ENSPNYG00000006542	hnrnpm	87	65.347	Pundamilia_nyererei
ENSODEG00000004347	-	99	47.976	ENSPNAG00000020740	hnrnpm	95	47.392	Pygocentrus_nattereri
ENSODEG00000004347	-	100	83.412	ENSRNOG00000007921	Hnrnpm	92	83.412	Rattus_norvegicus
ENSODEG00000004347	-	92	80.729	ENSRBIG00000039870	-	90	81.597	Rhinopithecus_bieti
ENSODEG00000004347	-	98	77.597	ENSRBIG00000041503	HNRNPM	100	77.425	Rhinopithecus_bieti
ENSODEG00000004347	-	100	80.253	ENSRROG00000033189	-	95	78.731	Rhinopithecus_roxellana
ENSODEG00000004347	-	100	83.728	ENSRROG00000038240	-	92	83.728	Rhinopithecus_roxellana
ENSODEG00000004347	-	96	78.571	ENSSBOG00000022413	-	96	79.563	Saimiri_boliviensis_boliviensis
ENSODEG00000004347	-	100	82.938	ENSSBOG00000032416	HNRNPM	91	82.938	Saimiri_boliviensis_boliviensis
ENSODEG00000004347	-	98	71.705	ENSSHAG00000005864	HNRNPM	100	72.408	Sarcophilus_harrisii
ENSODEG00000004347	-	99	48.933	ENSSFOG00015008815	hnrnpm	95	49.769	Scleropages_formosus
ENSODEG00000004347	-	99	70.297	ENSSMAG00000003992	hnrnpm	85	70.297	Scophthalmus_maximus
ENSODEG00000004347	-	99	42.966	ENSSDUG00000002188	hnrnpm	94	49.510	Seriola_dumerili
ENSODEG00000004347	-	99	66.337	ENSSLDG00000016713	hnrnpm	85	66.337	Seriola_lalandi_dorsalis
ENSODEG00000004347	-	73	81.141	ENSSARG00000000267	HNRNPM	64	81.141	Sorex_araneus
ENSODEG00000004347	-	100	57.434	ENSSPUG00000002270	HNRNPM	94	54.585	Sphenodon_punctatus
ENSODEG00000004347	-	99	66.337	ENSSPAG00000023132	hnrnpm	87	66.337	Stegastes_partitus
ENSODEG00000004347	-	100	83.412	ENSSSCG00000013602	HNRNPM	100	82.487	Sus_scrofa
ENSODEG00000004347	-	85	61.160	ENSTGUG00000000938	HNRNPM	99	61.160	Taeniopygia_guttata
ENSODEG00000004347	-	99	46.508	ENSTRUG00000013783	hnrnpm	96	45.975	Takifugu_rubripes
ENSODEG00000004347	-	99	47.222	ENSTNIG00000015530	hnrnpm	99	47.674	Tetraodon_nigroviridis
ENSODEG00000004347	-	79	73.770	ENSTBEG00000008718	HNRNPM	75	73.770	Tupaia_belangeri
ENSODEG00000004347	-	100	73.958	ENSTTRG00000009769	HNRNPM	92	73.810	Tursiops_truncatus
ENSODEG00000004347	-	100	81.933	ENSUAMG00000005710	HNRNPM	100	78.146	Ursus_americanus
ENSODEG00000004347	-	86	78.142	ENSUMAG00000014575	HNRNPM	93	80.414	Ursus_maritimus
ENSODEG00000004347	-	93	70.779	ENSVPAG00000004215	HNRNPM	91	70.779	Vicugna_pacos
ENSODEG00000004347	-	100	77.831	ENSVVUG00000024984	HNRNPM	100	78.146	Vulpes_vulpes
ENSODEG00000004347	-	100	50.969	ENSXETG00000001777	hnrnpm	98	49.331	Xenopus_tropicalis
ENSODEG00000004347	-	99	45.800	ENSXCOG00000002651	hnrnpm	84	44.762	Xiphophorus_couchianus
ENSODEG00000004347	-	98	58.491	ENSXMAG00000018502	hnrnpm	84	58.491	Xiphophorus_maculatus