EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004380 (Gene tree)
Gene ID: 101585406
Gene Symbol: -
Alias: -
Full Name: YTH N6-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 16802 bases
Position: chrJH651709.1:1067831-1084632
Accession: 101585406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005817	YTH	PF04146.15	1.3e-41	1	1
ENSODEP00000005818	YTH	PF04146.15	1.4e-41	1	1
ENSODEP00000005819	YTH	PF04146.15	1.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005918	-	1761	-	ENSODEP00000005819	586 (aa)	-	-
ENSODET00000005917	-	1779	-	ENSODEP00000005818	592 (aa)	-	-
ENSODET00000005916	-	2191	XM_004644158	ENSODEP00000005817	560 (aa)	XP_004644215	UPI00033375E2

Gene Model

Click here to download ENSODEG00000004380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004380	-	78	63.478	ENSODEG00000002437	-	97	61.522
ENSODEG00000004380	-	91	58.607	ENSODEG00000017508	-	99	55.744
ENSODEG00000004380	-	100	82.447	ENSODEG00000000074	-	100	82.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004380	-	100	92.679	ENSG00000149658	YTHDF1	100	92.679	Homo_sapiens
ENSODEG00000004380	-	100	74.527	ENSAPOG00000010796	YTHDF1	100	73.448	Acanthochromis_polyacanthus
ENSODEG00000004380	-	96	72.727	ENSAPOG00000004358	ythdf1	97	71.930	Acanthochromis_polyacanthus
ENSODEG00000004380	-	99	90.217	ENSAMEG00000017323	YTHDF1	98	92.029	Ailuropoda_melanoleuca
ENSODEG00000004380	-	100	74.350	ENSACIG00000020083	YTHDF1	100	73.611	Amphilophus_citrinellus
ENSODEG00000004380	-	96	69.519	ENSACIG00000011264	ythdf1	97	69.877	Amphilophus_citrinellus
ENSODEG00000004380	-	99	70.579	ENSAOCG00000022251	ythdf1	98	71.986	Amphiprion_ocellaris
ENSODEG00000004380	-	100	73.739	ENSAOCG00000012567	YTHDF1	100	73.043	Amphiprion_ocellaris
ENSODEG00000004380	-	100	73.913	ENSAPEG00000008750	YTHDF1	100	73.217	Amphiprion_percula
ENSODEG00000004380	-	96	70.339	ENSAPEG00000021878	ythdf1	98	65.865	Amphiprion_percula
ENSODEG00000004380	-	96	72.482	ENSATEG00000023840	ythdf1	98	73.084	Anabas_testudineus
ENSODEG00000004380	-	100	73.565	ENSATEG00000005996	YTHDF1	100	73.264	Anabas_testudineus
ENSODEG00000004380	-	99	88.510	ENSAPLG00000005985	YTHDF1	99	88.510	Anas_platyrhynchos
ENSODEG00000004380	-	100	84.314	ENSACAG00000005560	YTHDF1	100	84.135	Anolis_carolinensis
ENSODEG00000004380	-	100	78.571	ENSANAG00000021022	-	100	75.714	Aotus_nancymaae
ENSODEG00000004380	-	100	92.500	ENSANAG00000034786	-	100	92.500	Aotus_nancymaae
ENSODEG00000004380	-	100	74.087	ENSACLG00000025518	YTHDF1	100	73.391	Astatotilapia_calliptera
ENSODEG00000004380	-	100	88.036	ENSBTAG00000010383	YTHDF1	100	88.393	Bos_taurus
ENSODEG00000004380	-	100	92.321	ENSCJAG00000010056	YTHDF1	100	92.321	Callithrix_jacchus
ENSODEG00000004380	-	91	90.963	ENSCAFG00000012772	YTHDF1	99	90.784	Canis_familiaris
ENSODEG00000004380	-	91	90.963	ENSCAFG00020001214	YTHDF1	99	90.784	Canis_lupus_dingo
ENSODEG00000004380	-	100	87.321	ENSCHIG00000026494	YTHDF1	100	87.679	Capra_hircus
ENSODEG00000004380	-	99	90.860	ENSTSYG00000033436	YTHDF1	99	90.860	Carlito_syrichta
ENSODEG00000004380	-	97	93.186	ENSCAPG00000002544	YTHDF1	94	89.725	Cavia_aperea
ENSODEG00000004380	-	100	95.179	ENSCPOG00000010202	YTHDF1	100	95.357	Cavia_porcellus
ENSODEG00000004380	-	100	91.429	ENSCCAG00000024650	YTHDF1	100	92.143	Cebus_capucinus
ENSODEG00000004380	-	100	92.500	ENSCATG00000033272	YTHDF1	100	93.036	Cercocebus_atys
ENSODEG00000004380	-	100	97.679	ENSCLAG00000005989	YTHDF1	100	97.679	Chinchilla_lanigera
ENSODEG00000004380	-	100	92.500	ENSCSAG00000016266	YTHDF1	100	93.036	Chlorocebus_sabaeus
ENSODEG00000004380	-	100	88.770	ENSCPBG00000027183	YTHDF1	100	85.740	Chrysemys_picta_bellii
ENSODEG00000004380	-	99	92.391	ENSCANG00000029082	YTHDF1	98	92.935	Colobus_angolensis_palliatus
ENSODEG00000004380	-	100	93.571	ENSCGRG00001016568	Ythdf1	100	93.571	Cricetulus_griseus_chok1gshd
ENSODEG00000004380	-	98	93.466	ENSCGRG00000009207	Ythdf1	100	93.466	Cricetulus_griseus_crigri
ENSODEG00000004380	-	96	71.949	ENSCSEG00000020623	YTHDF1	98	73.091	Cynoglossus_semilaevis
ENSODEG00000004380	-	99	70.141	ENSCVAG00000017940	ythdf1	99	69.982	Cyprinodon_variegatus
ENSODEG00000004380	-	97	73.214	ENSCVAG00000014378	YTHDF1	99	74.061	Cyprinodon_variegatus
ENSODEG00000004380	-	100	69.870	ENSDARG00000016447	ythdf1	96	68.143	Danio_rerio
ENSODEG00000004380	-	100	90.714	ENSDNOG00000043590	YTHDF1	100	90.714	Dasypus_novemcinctus
ENSODEG00000004380	-	98	84.256	ENSDORG00000002879	Ythdf1	100	84.083	Dipodomys_ordii
ENSODEG00000004380	-	79	63.462	ENSETEG00000017860	-	98	67.376	Echinops_telfairi
ENSODEG00000004380	-	100	90.536	ENSEASG00005023186	YTHDF1	100	91.607	Equus_asinus_asinus
ENSODEG00000004380	-	98	90.563	ENSECAG00000019475	YTHDF1	100	90.802	Equus_caballus
ENSODEG00000004380	-	92	89.922	ENSEEUG00000007461	YTHDF1	100	88.975	Erinaceus_europaeus
ENSODEG00000004380	-	99	71.307	ENSELUG00000022768	ythdf1	99	71.647	Esox_lucius
ENSODEG00000004380	-	94	73.616	ENSELUG00000001906	YTHDF1	99	72.828	Esox_lucius
ENSODEG00000004380	-	100	89.821	ENSFCAG00000008917	YTHDF1	100	91.607	Felis_catus
ENSODEG00000004380	-	100	88.948	ENSFALG00000010463	YTHDF1	100	86.096	Ficedula_albicollis
ENSODEG00000004380	-	100	94.107	ENSFDAG00000019602	YTHDF1	100	95.000	Fukomys_damarensis
ENSODEG00000004380	-	97	74.107	ENSFHEG00000002540	YTHDF1	99	72.809	Fundulus_heteroclitus
ENSODEG00000004380	-	99	70.899	ENSFHEG00000023218	ythdf1	98	71.454	Fundulus_heteroclitus
ENSODEG00000004380	-	85	88.601	ENSGMOG00000019610	ythdf1	81	82.673	Gadus_morhua
ENSODEG00000004380	-	100	88.948	ENSGALG00000005745	YTHDF1	100	88.948	Gallus_gallus
ENSODEG00000004380	-	100	71.429	ENSGAFG00000021100	YTHDF1	99	74.014	Gambusia_affinis
ENSODEG00000004380	-	96	72.281	ENSGACG00000012014	ythdf1	97	69.153	Gasterosteus_aculeatus
ENSODEG00000004380	-	100	72.635	ENSGACG00000002613	YTHDF1	100	70.946	Gasterosteus_aculeatus
ENSODEG00000004380	-	100	88.592	ENSGAGG00000003007	YTHDF1	100	85.740	Gopherus_agassizii
ENSODEG00000004380	-	100	93.036	ENSGGOG00000008340	YTHDF1	100	93.036	Gorilla_gorilla
ENSODEG00000004380	-	100	73.913	ENSHBUG00000004875	YTHDF1	100	73.217	Haplochromis_burtoni
ENSODEG00000004380	-	96	70.951	ENSHBUG00000011284	ythdf1	98	70.979	Haplochromis_burtoni
ENSODEG00000004380	-	100	96.250	ENSHGLG00000006585	YTHDF1	100	96.250	Heterocephalus_glaber_female
ENSODEG00000004380	-	100	96.250	ENSHGLG00100004683	YTHDF1	100	96.250	Heterocephalus_glaber_male
ENSODEG00000004380	-	100	69.952	ENSHCOG00000011303	YTHDF1	100	73.247	Hippocampus_comes
ENSODEG00000004380	-	97	76.770	ENSIPUG00000000425	Ythdf1	98	76.087	Ictalurus_punctatus
ENSODEG00000004380	-	99	93.478	ENSSTOG00000023001	YTHDF1	99	94.022	Ictidomys_tridecemlineatus
ENSODEG00000004380	-	98	93.285	ENSJJAG00000013589	Ythdf1	100	93.829	Jaculus_jaculus
ENSODEG00000004380	-	97	73.929	ENSKMAG00000017472	YTHDF1	99	73.835	Kryptolebias_marmoratus
ENSODEG00000004380	-	96	71.171	ENSKMAG00000005595	ythdf1	98	72.014	Kryptolebias_marmoratus
ENSODEG00000004380	-	100	73.345	ENSLBEG00000012068	YTHDF1	100	73.966	Labrus_bergylta
ENSODEG00000004380	-	96	71.634	ENSLBEG00000014105	ythdf1	95	72.064	Labrus_bergylta
ENSODEG00000004380	-	96	80.515	ENSLACG00000014195	YTHDF1	98	81.365	Latimeria_chalumnae
ENSODEG00000004380	-	100	76.936	ENSLOCG00000005020	ythdf1	95	77.413	Lepisosteus_oculatus
ENSODEG00000004380	-	100	90.714	ENSLAFG00000008884	YTHDF1	100	90.714	Loxodonta_africana
ENSODEG00000004380	-	100	92.500	ENSMFAG00000042868	YTHDF1	100	93.036	Macaca_fascicularis
ENSODEG00000004380	-	100	92.500	ENSMMUG00000009227	YTHDF1	100	93.036	Macaca_mulatta
ENSODEG00000004380	-	100	92.500	ENSMNEG00000030851	YTHDF1	100	93.036	Macaca_nemestrina
ENSODEG00000004380	-	98	92.559	ENSMLEG00000009252	YTHDF1	100	93.103	Mandrillus_leucophaeus
ENSODEG00000004380	-	100	74.003	ENSMAMG00000011072	YTHDF1	100	72.743	Mastacembelus_armatus
ENSODEG00000004380	-	96	71.223	ENSMAMG00000024255	ythdf1	99	71.057	Mastacembelus_armatus
ENSODEG00000004380	-	96	72.093	ENSMZEG00005026397	ythdf1	98	72.420	Maylandia_zebra
ENSODEG00000004380	-	100	73.913	ENSMZEG00005023596	YTHDF1	100	73.217	Maylandia_zebra
ENSODEG00000004380	-	99	88.014	ENSMGAG00000006139	YTHDF1	99	88.014	Meleagris_gallopavo
ENSODEG00000004380	-	100	93.571	ENSMAUG00000017660	Ythdf1	100	93.571	Mesocricetus_auratus
ENSODEG00000004380	-	100	92.500	ENSMICG00000032266	YTHDF1	100	93.036	Microcebus_murinus
ENSODEG00000004380	-	100	93.571	ENSMOCG00000013573	Ythdf1	100	93.571	Microtus_ochrogaster
ENSODEG00000004380	-	99	70.346	ENSMMOG00000020467	YTHDF1	96	69.865	Mola_mola
ENSODEG00000004380	-	91	89.237	ENSMODG00000016842	YTHDF1	100	89.237	Monodelphis_domestica
ENSODEG00000004380	-	96	71.147	ENSMALG00000015672	ythdf1	96	70.826	Monopterus_albus
ENSODEG00000004380	-	100	73.103	ENSMALG00000022209	YTHDF1	100	73.310	Monopterus_albus
ENSODEG00000004380	-	100	93.750	MGP_CAROLIEiJ_G0024790	Ythdf1	100	93.750	Mus_caroli
ENSODEG00000004380	-	100	93.750	ENSMUSG00000038848	Ythdf1	100	93.750	Mus_musculus
ENSODEG00000004380	-	100	93.393	MGP_PahariEiJ_G0026237	Ythdf1	100	93.393	Mus_pahari
ENSODEG00000004380	-	100	93.750	MGP_SPRETEiJ_G0025715	Ythdf1	100	93.750	Mus_spretus
ENSODEG00000004380	-	91	85.882	ENSMPUG00000008111	YTHDF1	100	86.275	Mustela_putorius_furo
ENSODEG00000004380	-	97	89.871	ENSMLUG00000002241	YTHDF1	96	89.871	Myotis_lucifugus
ENSODEG00000004380	-	100	92.500	ENSNGAG00000000334	Ythdf1	100	94.107	Nannospalax_galili
ENSODEG00000004380	-	99	68.557	ENSNBRG00000008213	ythdf1	98	70.246	Neolamprologus_brichardi
ENSODEG00000004380	-	100	73.913	ENSNBRG00000015321	YTHDF1	100	73.217	Neolamprologus_brichardi
ENSODEG00000004380	-	95	79.323	ENSOPRG00000001758	-	99	79.699	Ochotona_princeps
ENSODEG00000004380	-	96	69.965	ENSONIG00000016799	ythdf1	98	68.638	Oreochromis_niloticus
ENSODEG00000004380	-	100	88.770	ENSOANG00000003723	YTHDF1	100	88.770	Ornithorhynchus_anatinus
ENSODEG00000004380	-	100	81.528	ENSOCUG00000012780	YTHDF1	100	82.060	Oryctolagus_cuniculus
ENSODEG00000004380	-	97	73.477	ENSORLG00000009739	YTHDF1	99	73.345	Oryzias_latipes
ENSODEG00000004380	-	96	69.775	ENSORLG00000014665	YTHDF1	95	68.718	Oryzias_latipes
ENSODEG00000004380	-	96	70.242	ENSORLG00020000307	ythdf1	95	69.178	Oryzias_latipes_hni
ENSODEG00000004380	-	97	74.410	ENSORLG00020001332	YTHDF1	99	74.101	Oryzias_latipes_hni
ENSODEG00000004380	-	96	70.069	ENSORLG00015006302	ythdf1	98	66.288	Oryzias_latipes_hsok
ENSODEG00000004380	-	100	70.530	ENSORLG00015018321	YTHDF1	99	72.987	Oryzias_latipes_hsok
ENSODEG00000004380	-	96	72.679	ENSOMEG00000002941	YTHDF1	98	71.735	Oryzias_melastigma
ENSODEG00000004380	-	100	91.429	ENSOGAG00000000480	YTHDF1	100	91.429	Otolemur_garnettii
ENSODEG00000004380	-	99	82.971	ENSOARG00000011639	YTHDF1	98	83.333	Ovis_aries
ENSODEG00000004380	-	99	93.116	ENSPPAG00000023277	YTHDF1	100	93.116	Pan_paniscus
ENSODEG00000004380	-	100	89.821	ENSPPRG00000020805	YTHDF1	100	91.607	Panthera_pardus
ENSODEG00000004380	-	99	80.616	ENSPTIG00000017355	YTHDF1	99	81.159	Panthera_tigris_altaica
ENSODEG00000004380	-	100	93.036	ENSPTRG00000013730	YTHDF1	100	93.036	Pan_troglodytes
ENSODEG00000004380	-	100	92.500	ENSPANG00000021472	YTHDF1	100	93.036	Papio_anubis
ENSODEG00000004380	-	100	68.761	ENSPKIG00000005427	ythdf1	100	69.580	Paramormyrops_kingsleyae
ENSODEG00000004380	-	99	71.301	ENSPKIG00000005026	YTHDF1	97	70.163	Paramormyrops_kingsleyae
ENSODEG00000004380	-	97	88.645	ENSPSIG00000005529	YTHDF1	96	88.454	Pelodiscus_sinensis
ENSODEG00000004380	-	93	70.344	ENSPMGG00000015328	ythdf1	98	70.526	Periophthalmus_magnuspinnatus
ENSODEG00000004380	-	97	72.852	ENSPMGG00000009101	YTHDF1	99	71.672	Periophthalmus_magnuspinnatus
ENSODEG00000004380	-	98	93.648	ENSPEMG00000020199	Ythdf1	100	93.648	Peromyscus_maniculatus_bairdii
ENSODEG00000004380	-	99	88.989	ENSPCIG00000017170	YTHDF1	100	88.845	Phascolarctos_cinereus
ENSODEG00000004380	-	99	69.932	ENSPFOG00000005405	ythdf1	98	66.667	Poecilia_formosa
ENSODEG00000004380	-	100	69.231	ENSPLAG00000006298	YTHDF1	98	68.534	Poecilia_latipinna
ENSODEG00000004380	-	99	72.007	ENSPLAG00000006653	ythdf1	99	70.723	Poecilia_latipinna
ENSODEG00000004380	-	100	72.348	ENSPMEG00000020969	-	100	72.696	Poecilia_mexicana
ENSODEG00000004380	-	99	71.252	ENSPMEG00000023753	ythdf1	99	70.194	Poecilia_mexicana
ENSODEG00000004380	-	99	71.025	ENSPREG00000002173	ythdf1	99	70.671	Poecilia_reticulata
ENSODEG00000004380	-	97	69.652	ENSPREG00000017662	YTHDF1	98	68.325	Poecilia_reticulata
ENSODEG00000004380	-	85	96.020	ENSPPYG00000011226	YTHDF1	100	96.020	Pongo_abelii
ENSODEG00000004380	-	89	84.274	ENSPCAG00000002452	YTHDF1	100	81.496	Procavia_capensis
ENSODEG00000004380	-	100	92.857	ENSPCOG00000025969	YTHDF1	100	93.393	Propithecus_coquereli
ENSODEG00000004380	-	98	80.944	ENSPVAG00000017568	YTHDF1	98	82.103	Pteropus_vampyrus
ENSODEG00000004380	-	100	73.913	ENSPNYG00000002266	YTHDF1	100	73.217	Pundamilia_nyererei
ENSODEG00000004380	-	96	72.093	ENSPNYG00000014007	ythdf1	98	72.420	Pundamilia_nyererei
ENSODEG00000004380	-	100	70.098	ENSPNAG00000012447	ythdf1	100	72.935	Pygocentrus_nattereri
ENSODEG00000004380	-	100	93.393	ENSRNOG00000027015	Ythdf1	100	93.393	Rattus_norvegicus
ENSODEG00000004380	-	100	91.250	ENSRBIG00000044959	YTHDF1	100	91.786	Rhinopithecus_bieti
ENSODEG00000004380	-	100	91.071	ENSRROG00000033014	YTHDF1	100	91.607	Rhinopithecus_roxellana
ENSODEG00000004380	-	97	90.055	ENSSBOG00000027278	YTHDF1	100	86.863	Saimiri_boliviensis_boliviensis
ENSODEG00000004380	-	99	88.351	ENSSHAG00000010430	YTHDF1	89	88.351	Sarcophilus_harrisii
ENSODEG00000004380	-	100	72.804	ENSSFOG00015000284	ythdf1	100	71.695	Scleropages_formosus
ENSODEG00000004380	-	95	78.947	ENSSMAG00000007635	YTHDF1	99	70.184	Scophthalmus_maximus
ENSODEG00000004380	-	72	83.444	ENSSMAG00000013715	ythdf1	99	62.942	Scophthalmus_maximus
ENSODEG00000004380	-	99	74.603	ENSSDUG00000015823	YTHDF1	99	73.721	Seriola_dumerili
ENSODEG00000004380	-	96	72.760	ENSSDUG00000000435	ythdf1	97	73.016	Seriola_dumerili
ENSODEG00000004380	-	100	69.097	ENSSLDG00000001054	YTHDF1	100	71.908	Seriola_lalandi_dorsalis
ENSODEG00000004380	-	91	87.476	ENSSPUG00000015143	YTHDF1	100	85.519	Sphenodon_punctatus
ENSODEG00000004380	-	100	72.759	ENSSPAG00000003666	YTHDF1	100	72.069	Stegastes_partitus
ENSODEG00000004380	-	100	86.809	ENSSSCG00000040086	YTHDF1	100	86.453	Sus_scrofa
ENSODEG00000004380	-	99	88.788	ENSTGUG00000007565	YTHDF1	100	88.788	Taeniopygia_guttata
ENSODEG00000004380	-	99	71.212	ENSTRUG00000004288	ythdf1	98	66.951	Takifugu_rubripes
ENSODEG00000004380	-	100	72.600	ENSTNIG00000003975	YTHDF1	100	71.354	Tetraodon_nigroviridis
ENSODEG00000004380	-	99	71.705	ENSTNIG00000012490	ythdf1	99	72.105	Tetraodon_nigroviridis
ENSODEG00000004380	-	99	85.714	ENSTTRG00000001804	YTHDF1	98	86.606	Tursiops_truncatus
ENSODEG00000004380	-	97	90.055	ENSUAMG00000011021	YTHDF1	100	90.802	Ursus_americanus
ENSODEG00000004380	-	91	88.627	ENSUMAG00000022290	YTHDF1	100	90.411	Ursus_maritimus
ENSODEG00000004380	-	91	90.766	ENSVVUG00000015275	YTHDF1	99	90.588	Vulpes_vulpes
ENSODEG00000004380	-	96	83.210	ENSXETG00000027086	ythdf1	96	81.101	Xenopus_tropicalis
ENSODEG00000004380	-	96	71.767	ENSXCOG00000002490	ythdf1	96	70.796	Xiphophorus_couchianus
ENSODEG00000004380	-	97	69.802	ENSXCOG00000008115	YTHDF1	99	68.729	Xiphophorus_couchianus
ENSODEG00000004380	-	97	73.929	ENSXMAG00000015644	YTHDF1	99	74.194	Xiphophorus_maculatus
ENSODEG00000004380	-	96	72.080	ENSXMAG00000008525	ythdf1	96	71.275	Xiphophorus_maculatus