EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004393 (Gene tree)
Gene ID: 101560748
Gene Symbol: RBM17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 20729 bases
Position: chrJH651586.1:9388781-9409509
Accession: 101560748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005834	RRM_1	PF00076.22	8.3e-05	1	1
ENSODEP00000005834	G-patch	PF01585.23	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000005933	RBM17-202	1221	XM_012515599	ENSODEP00000005834	406 (aa)	-	-
ENSODET00000005932	RBM17-201	1224	-	ENSODEP00000005833	118 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004393	RBM17	97	75.888	ENSODEG00000007286	-	99	75.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004393	RBM17	100	97.537	ENSG00000134453	RBM17	100	98.585	Homo_sapiens
ENSODEG00000004393	RBM17	99	82.108	ENSAPOG00000007101	rbm17	99	82.310	Acanthochromis_polyacanthus
ENSODEG00000004393	RBM17	100	98.030	ENSAMEG00000002107	RBM17	100	98.030	Ailuropoda_melanoleuca
ENSODEG00000004393	RBM17	100	78.398	ENSACIG00000006251	rbm17	100	78.398	Amphilophus_citrinellus
ENSODEG00000004393	RBM17	100	82.238	ENSAOCG00000014892	rbm17	100	82.238	Amphiprion_ocellaris
ENSODEG00000004393	RBM17	100	82.238	ENSAPEG00000022779	rbm17	100	82.238	Amphiprion_percula
ENSODEG00000004393	RBM17	100	79.059	ENSATEG00000004406	rbm17	100	79.059	Anabas_testudineus
ENSODEG00000004393	RBM17	100	94.335	ENSAPLG00000004190	RBM17	100	94.335	Anas_platyrhynchos
ENSODEG00000004393	RBM17	89	89.757	ENSACAG00000005418	RBM17	99	90.027	Anolis_carolinensis
ENSODEG00000004393	RBM17	100	97.537	ENSANAG00000030127	RBM17	100	97.537	Aotus_nancymaae
ENSODEG00000004393	RBM17	100	83.292	ENSANAG00000019330	-	98	90.984	Aotus_nancymaae
ENSODEG00000004393	RBM17	100	78.240	ENSACLG00000003928	rbm17	100	78.240	Astatotilapia_calliptera
ENSODEG00000004393	RBM17	100	76.995	ENSAMXG00000005853	rbm17	100	79.577	Astyanax_mexicanus
ENSODEG00000004393	RBM17	100	96.059	ENSBTAG00000011094	-	100	96.059	Bos_taurus
ENSODEG00000004393	RBM17	100	97.537	ENSBTAG00000021951	RBM17	100	97.537	Bos_taurus
ENSODEG00000004393	RBM17	74	33.882	WBGene00010233	F58B3.7	91	32.398	Caenorhabditis_elegans
ENSODEG00000004393	RBM17	100	97.537	ENSCJAG00000020573	RBM17	100	97.537	Callithrix_jacchus
ENSODEG00000004393	RBM17	100	98.030	ENSCAFG00000005206	RBM17	100	98.030	Canis_familiaris
ENSODEG00000004393	RBM17	100	93.596	ENSCAFG00020005420	RBM17	100	93.596	Canis_lupus_dingo
ENSODEG00000004393	RBM17	100	97.537	ENSCHIG00000023204	-	100	97.537	Capra_hircus
ENSODEG00000004393	RBM17	100	94.828	ENSCHIG00000019921	-	100	94.828	Capra_hircus
ENSODEG00000004393	RBM17	100	97.291	ENSTSYG00000001165	RBM17	100	97.291	Carlito_syrichta
ENSODEG00000004393	RBM17	96	75.897	ENSCAPG00000006275	RBM17	100	80.109	Cavia_aperea
ENSODEG00000004393	RBM17	100	94.866	ENSCPOG00000005679	RBM17	100	94.866	Cavia_porcellus
ENSODEG00000004393	RBM17	100	97.537	ENSCCAG00000018655	RBM17	100	97.537	Cebus_capucinus
ENSODEG00000004393	RBM17	100	97.537	ENSCATG00000041566	RBM17	100	97.537	Cercocebus_atys
ENSODEG00000004393	RBM17	100	99.261	ENSCLAG00000012195	RBM17	99	99.261	Chinchilla_lanigera
ENSODEG00000004393	RBM17	100	97.537	ENSCSAG00000013564	RBM17	100	97.537	Chlorocebus_sabaeus
ENSODEG00000004393	RBM17	92	78.342	ENSCHOG00000005131	RBM17	100	78.342	Choloepus_hoffmanni
ENSODEG00000004393	RBM17	100	93.596	ENSCPBG00000019836	RBM17	100	93.596	Chrysemys_picta_bellii
ENSODEG00000004393	RBM17	100	48.077	ENSCSAVG00000008782	-	100	46.506	Ciona_savignyi
ENSODEG00000004393	RBM17	98	83.627	ENSCANG00000023715	-	100	83.627	Colobus_angolensis_palliatus
ENSODEG00000004393	RBM17	100	97.291	ENSCANG00000030987	RBM17	100	97.291	Colobus_angolensis_palliatus
ENSODEG00000004393	RBM17	100	98.522	ENSCGRG00001013842	Rbm17	100	98.522	Cricetulus_griseus_chok1gshd
ENSODEG00000004393	RBM17	100	75.862	ENSCGRG00001009256	-	100	73.892	Cricetulus_griseus_chok1gshd
ENSODEG00000004393	RBM17	100	98.522	ENSCGRG00000006907	Rbm17	100	98.522	Cricetulus_griseus_crigri
ENSODEG00000004393	RBM17	100	79.075	ENSCSEG00000018164	rbm17	100	79.384	Cynoglossus_semilaevis
ENSODEG00000004393	RBM17	100	73.594	ENSCVAG00000002476	rbm17	100	74.940	Cyprinodon_variegatus
ENSODEG00000004393	RBM17	100	78.404	ENSDARG00000031346	rbm17	100	78.404	Danio_rerio
ENSODEG00000004393	RBM17	100	97.044	ENSDNOG00000035920	RBM17	100	97.044	Dasypus_novemcinctus
ENSODEG00000004393	RBM17	99	36.203	FBgn0086683	Spf45	99	36.476	Drosophila_melanogaster
ENSODEG00000004393	RBM17	100	73.892	ENSETEG00000006642	RBM17	100	73.892	Echinops_telfairi
ENSODEG00000004393	RBM17	63	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSODEG00000004393	RBM17	92	94.400	ENSEASG00005009236	-	100	94.400	Equus_asinus_asinus
ENSODEG00000004393	RBM17	100	93.612	ENSEASG00005019205	-	100	93.612	Equus_asinus_asinus
ENSODEG00000004393	RBM17	100	82.020	ENSECAG00000008939	RBM17	100	84.236	Equus_caballus
ENSODEG00000004393	RBM17	100	87.438	ENSECAG00000001379	-	100	87.438	Equus_caballus
ENSODEG00000004393	RBM17	85	80.172	ENSEEUG00000013077	RBM17	100	80.172	Erinaceus_europaeus
ENSODEG00000004393	RBM17	100	77.367	ENSELUG00000006440	rbm17	100	77.367	Esox_lucius
ENSODEG00000004393	RBM17	100	98.030	ENSFCAG00000031988	RBM17	100	98.030	Felis_catus
ENSODEG00000004393	RBM17	100	93.103	ENSFALG00000001790	RBM17	100	93.103	Ficedula_albicollis
ENSODEG00000004393	RBM17	100	99.261	ENSFDAG00000007470	RBM17	100	99.261	Fukomys_damarensis
ENSODEG00000004393	RBM17	100	78.353	ENSFHEG00000001266	rbm17	100	77.442	Fundulus_heteroclitus
ENSODEG00000004393	RBM17	99	75.592	ENSGMOG00000008438	rbm17	100	75.592	Gadus_morhua
ENSODEG00000004393	RBM17	100	94.089	ENSGALG00000006332	RBM17	100	94.089	Gallus_gallus
ENSODEG00000004393	RBM17	100	80.535	ENSGAFG00000019879	rbm17	100	80.535	Gambusia_affinis
ENSODEG00000004393	RBM17	99	80.488	ENSGACG00000019174	rbm17	99	80.488	Gasterosteus_aculeatus
ENSODEG00000004393	RBM17	100	93.596	ENSGAGG00000019906	RBM17	100	93.596	Gopherus_agassizii
ENSODEG00000004393	RBM17	100	82.725	ENSHBUG00000016624	rbm17	100	82.725	Haplochromis_burtoni
ENSODEG00000004393	RBM17	100	99.261	ENSHGLG00000011580	RBM17	100	99.261	Heterocephalus_glaber_female
ENSODEG00000004393	RBM17	100	76.355	ENSHGLG00100010556	-	100	74.631	Heterocephalus_glaber_male
ENSODEG00000004393	RBM17	100	99.261	ENSHGLG00100010460	RBM17	100	99.261	Heterocephalus_glaber_male
ENSODEG00000004393	RBM17	99	78.095	ENSHCOG00000010865	rbm17	100	78.095	Hippocampus_comes
ENSODEG00000004393	RBM17	100	78.505	ENSIPUG00000007699	Rbm17	100	78.505	Ictalurus_punctatus
ENSODEG00000004393	RBM17	100	98.768	ENSSTOG00000013591	RBM17	100	98.768	Ictidomys_tridecemlineatus
ENSODEG00000004393	RBM17	100	98.522	ENSJJAG00000022886	Rbm17	100	98.522	Jaculus_jaculus
ENSODEG00000004393	RBM17	100	73.399	ENSJJAG00000000993	-	100	70.098	Jaculus_jaculus
ENSODEG00000004393	RBM17	100	77.859	ENSKMAG00000021400	rbm17	100	79.059	Kryptolebias_marmoratus
ENSODEG00000004393	RBM17	100	81.265	ENSLBEG00000000881	rbm17	100	79.059	Labrus_bergylta
ENSODEG00000004393	RBM17	99	69.014	ENSLACG00000017297	RBM17	99	69.014	Latimeria_chalumnae
ENSODEG00000004393	RBM17	100	85.819	ENSLOCG00000015659	rbm17	100	85.819	Lepisosteus_oculatus
ENSODEG00000004393	RBM17	100	97.549	ENSLAFG00000011629	RBM17	100	97.549	Loxodonta_africana
ENSODEG00000004393	RBM17	100	97.537	ENSMFAG00000035521	RBM17	100	97.537	Macaca_fascicularis
ENSODEG00000004393	RBM17	100	97.537	ENSMMUG00000015152	RBM17	100	97.537	Macaca_mulatta
ENSODEG00000004393	RBM17	100	97.537	ENSMNEG00000017264	RBM17	100	97.537	Macaca_nemestrina
ENSODEG00000004393	RBM17	100	97.537	ENSMLEG00000029340	RBM17	100	97.537	Mandrillus_leucophaeus
ENSODEG00000004393	RBM17	100	78.824	ENSMAMG00000000387	rbm17	100	78.824	Mastacembelus_armatus
ENSODEG00000004393	RBM17	100	80.615	ENSMZEG00005015179	rbm17	100	80.615	Maylandia_zebra
ENSODEG00000004393	RBM17	100	93.154	ENSMGAG00000003981	RBM17	100	93.154	Meleagris_gallopavo
ENSODEG00000004393	RBM17	100	98.522	ENSMAUG00000019247	Rbm17	100	98.522	Mesocricetus_auratus
ENSODEG00000004393	RBM17	100	97.291	ENSMICG00000003976	-	100	97.291	Microcebus_murinus
ENSODEG00000004393	RBM17	100	89.756	ENSMICG00000041489	-	100	89.756	Microcebus_murinus
ENSODEG00000004393	RBM17	92	80.533	ENSMOCG00000014517	-	99	80.533	Microtus_ochrogaster
ENSODEG00000004393	RBM17	100	98.522	ENSMOCG00000011847	Rbm17	100	98.522	Microtus_ochrogaster
ENSODEG00000004393	RBM17	100	74.760	ENSMMOG00000010264	rbm17	100	73.558	Mola_mola
ENSODEG00000004393	RBM17	100	96.305	ENSMODG00000016648	RBM17	100	96.305	Monodelphis_domestica
ENSODEG00000004393	RBM17	100	78.169	ENSMALG00000010597	rbm17	100	78.169	Monopterus_albus
ENSODEG00000004393	RBM17	100	98.030	MGP_CAROLIEiJ_G0023173	Rbm17	100	98.030	Mus_caroli
ENSODEG00000004393	RBM17	100	98.030	ENSMUSG00000037197	Rbm17	100	98.030	Mus_musculus
ENSODEG00000004393	RBM17	100	97.783	MGP_PahariEiJ_G0019233	Rbm17	100	97.783	Mus_pahari
ENSODEG00000004393	RBM17	100	98.030	MGP_SPRETEiJ_G0024091	Rbm17	100	98.030	Mus_spretus
ENSODEG00000004393	RBM17	86	97.429	ENSMPUG00000016359	RBM17	97	97.429	Mustela_putorius_furo
ENSODEG00000004393	RBM17	100	96.069	ENSMLUG00000002302	-	100	96.069	Myotis_lucifugus
ENSODEG00000004393	RBM17	100	92.118	ENSMLUG00000025709	-	100	92.118	Myotis_lucifugus
ENSODEG00000004393	RBM17	100	67.241	ENSNGAG00000000663	-	100	66.830	Nannospalax_galili
ENSODEG00000004393	RBM17	100	98.522	ENSNGAG00000000741	Rbm17	100	98.522	Nannospalax_galili
ENSODEG00000004393	RBM17	100	76.773	ENSNBRG00000018148	rbm17	100	76.773	Neolamprologus_brichardi
ENSODEG00000004393	RBM17	100	97.537	ENSNLEG00000033350	RBM17	100	97.537	Nomascus_leucogenys
ENSODEG00000004393	RBM17	100	90.394	ENSMEUG00000011347	RBM17	100	90.394	Notamacropus_eugenii
ENSODEG00000004393	RBM17	100	84.236	ENSOPRG00000002993	RBM17	100	84.236	Ochotona_princeps
ENSODEG00000004393	RBM17	100	82.725	ENSONIG00000011838	rbm17	100	82.725	Oreochromis_niloticus
ENSODEG00000004393	RBM17	100	95.567	ENSOANG00000015455	RBM17	100	95.567	Ornithorhynchus_anatinus
ENSODEG00000004393	RBM17	100	80.235	ENSORLG00000028798	rbm17	100	80.235	Oryzias_latipes
ENSODEG00000004393	RBM17	100	80.235	ENSORLG00020004593	rbm17	100	78.484	Oryzias_latipes_hni
ENSODEG00000004393	RBM17	100	82.968	ENSORLG00015000033	rbm17	100	82.968	Oryzias_latipes_hsok
ENSODEG00000004393	RBM17	100	79.765	ENSOMEG00000012060	rbm17	100	85.366	Oryzias_melastigma
ENSODEG00000004393	RBM17	100	97.537	ENSOGAG00000015687	RBM17	100	97.537	Otolemur_garnettii
ENSODEG00000004393	RBM17	100	97.537	ENSOARG00000012975	RBM17	100	97.537	Ovis_aries
ENSODEG00000004393	RBM17	100	97.537	ENSPPAG00000032347	RBM17	100	97.537	Pan_paniscus
ENSODEG00000004393	RBM17	100	98.030	ENSPPRG00000010706	RBM17	100	98.030	Panthera_pardus
ENSODEG00000004393	RBM17	100	98.030	ENSPTIG00000007596	RBM17	100	98.030	Panthera_tigris_altaica
ENSODEG00000004393	RBM17	100	97.537	ENSPTRG00000002265	RBM17	100	97.537	Pan_troglodytes
ENSODEG00000004393	RBM17	100	97.537	ENSPANG00000023425	RBM17	100	97.537	Papio_anubis
ENSODEG00000004393	RBM17	100	77.518	ENSPKIG00000005048	-	100	77.518	Paramormyrops_kingsleyae
ENSODEG00000004393	RBM17	100	80.516	ENSPKIG00000025526	rbm17	100	80.328	Paramormyrops_kingsleyae
ENSODEG00000004393	RBM17	100	92.176	ENSPSIG00000012332	RBM17	100	92.176	Pelodiscus_sinensis
ENSODEG00000004393	RBM17	100	76.829	ENSPMGG00000007980	rbm17	100	76.829	Periophthalmus_magnuspinnatus
ENSODEG00000004393	RBM17	100	98.522	ENSPEMG00000014320	Rbm17	100	98.522	Peromyscus_maniculatus_bairdii
ENSODEG00000004393	RBM17	100	96.078	ENSPCIG00000019260	-	100	96.078	Phascolarctos_cinereus
ENSODEG00000004393	RBM17	100	77.882	ENSPFOG00000013271	rbm17	100	78.588	Poecilia_formosa
ENSODEG00000004393	RBM17	100	78.118	ENSPLAG00000004455	rbm17	100	78.824	Poecilia_latipinna
ENSODEG00000004393	RBM17	100	81.022	ENSPMEG00000014864	rbm17	100	81.022	Poecilia_mexicana
ENSODEG00000004393	RBM17	100	77.412	ENSPREG00000015589	rbm17	100	78.118	Poecilia_reticulata
ENSODEG00000004393	RBM17	81	69.725	ENSPPYG00000019042	-	100	69.419	Pongo_abelii
ENSODEG00000004393	RBM17	99	71.040	ENSPPYG00000019881	-	100	70.792	Pongo_abelii
ENSODEG00000004393	RBM17	100	97.537	ENSPPYG00000002067	RBM17	100	97.537	Pongo_abelii
ENSODEG00000004393	RBM17	100	89.655	ENSPCAG00000016879	RBM17	100	89.655	Procavia_capensis
ENSODEG00000004393	RBM17	100	97.044	ENSPCOG00000027881	RBM17	100	97.044	Propithecus_coquereli
ENSODEG00000004393	RBM17	100	86.700	ENSPVAG00000015499	RBM17	100	85.222	Pteropus_vampyrus
ENSODEG00000004393	RBM17	100	75.369	ENSPNYG00000015274	rbm17	100	75.369	Pundamilia_nyererei
ENSODEG00000004393	RBM17	100	79.812	ENSPNAG00000030046	rbm17	100	79.812	Pygocentrus_nattereri
ENSODEG00000004393	RBM17	100	98.522	ENSRNOG00000018767	Rbm17	100	98.522	Rattus_norvegicus
ENSODEG00000004393	RBM17	100	97.537	ENSRBIG00000043727	RBM17	100	97.537	Rhinopithecus_bieti
ENSODEG00000004393	RBM17	100	97.537	ENSRROG00000044142	RBM17	100	97.537	Rhinopithecus_roxellana
ENSODEG00000004393	RBM17	100	87.224	ENSSBOG00000023653	-	100	87.224	Saimiri_boliviensis_boliviensis
ENSODEG00000004393	RBM17	100	97.291	ENSSBOG00000031661	-	100	97.291	Saimiri_boliviensis_boliviensis
ENSODEG00000004393	RBM17	100	96.560	ENSSHAG00000012480	-	100	96.560	Sarcophilus_harrisii
ENSODEG00000004393	RBM17	100	81.752	ENSSFOG00015009892	rbm17	100	81.752	Scleropages_formosus
ENSODEG00000004393	RBM17	100	77.941	ENSSMAG00000012368	rbm17	100	77.650	Scophthalmus_maximus
ENSODEG00000004393	RBM17	100	81.055	ENSSDUG00000015015	rbm17	100	81.055	Seriola_dumerili
ENSODEG00000004393	RBM17	100	81.055	ENSSLDG00000014486	rbm17	100	81.055	Seriola_lalandi_dorsalis
ENSODEG00000004393	RBM17	59	77.500	ENSSARG00000001792	-	100	77.500	Sorex_araneus
ENSODEG00000004393	RBM17	99	93.580	ENSSPUG00000001036	RBM17	99	93.580	Sphenodon_punctatus
ENSODEG00000004393	RBM17	100	81.752	ENSSPAG00000002338	rbm17	100	81.752	Stegastes_partitus
ENSODEG00000004393	RBM17	100	97.291	ENSSSCG00000011134	RBM17	100	97.291	Sus_scrofa
ENSODEG00000004393	RBM17	100	93.596	ENSTGUG00000002013	RBM17	100	93.596	Taeniopygia_guttata
ENSODEG00000004393	RBM17	100	81.509	ENSTRUG00000010698	rbm17	100	81.509	Takifugu_rubripes
ENSODEG00000004393	RBM17	100	82.725	ENSTNIG00000006892	rbm17	100	82.725	Tetraodon_nigroviridis
ENSODEG00000004393	RBM17	100	76.355	ENSTBEG00000014686	RBM17	100	76.355	Tupaia_belangeri
ENSODEG00000004393	RBM17	90	97.260	ENSTTRG00000001344	RBM17	100	97.260	Tursiops_truncatus
ENSODEG00000004393	RBM17	100	93.596	ENSUAMG00000009499	RBM17	100	93.596	Ursus_americanus
ENSODEG00000004393	RBM17	100	97.783	ENSUMAG00000012237	RBM17	100	97.783	Ursus_maritimus
ENSODEG00000004393	RBM17	100	83.251	ENSVPAG00000005497	RBM17	100	83.251	Vicugna_pacos
ENSODEG00000004393	RBM17	100	93.596	ENSVVUG00000006780	RBM17	97	97.429	Vulpes_vulpes
ENSODEG00000004393	RBM17	99	85.926	ENSXETG00000018123	rbm17	100	85.926	Xenopus_tropicalis
ENSODEG00000004393	RBM17	100	79.805	ENSXMAG00000008674	rbm17	100	80.535	Xiphophorus_maculatus