EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004466 (Gene tree)
Gene ID: 101589696
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 160902 bases
Position: chrJH651600.1:2600100-2761001
Accession: 101589696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000005931	ResIII	PF04851.15	1.4e-06	1	1
ENSODEP00000005931	BRK	PF07533.16	1e-30	1	2
ENSODEP00000005931	BRK	PF07533.16	1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006030	CHD9-201	11254	XM_004637023	ENSODEP00000005931	2896 (aa)	XP_004637080	UPI0003336B28

Gene Model

Click here to download ENSODEG00000004466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004466	CHD9	85	70.907	ENSODEG00000002424	CHD7	94	54.161
ENSODEG00000004466	CHD9	65	68.451	ENSODEG00000001047	CHD8	76	68.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004466	CHD9	99	94.203	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSODEG00000004466	CHD9	86	70.735	ENSAPOG00000023034	chd9	99	60.294	Acanthochromis_polyacanthus
ENSODEG00000004466	CHD9	99	94.348	ENSAMEG00000016232	CHD9	99	94.764	Ailuropoda_melanoleuca
ENSODEG00000004466	CHD9	80	69.172	ENSACIG00000004097	chd9	73	61.328	Amphilophus_citrinellus
ENSODEG00000004466	CHD9	84	71.116	ENSAOCG00000005487	chd9	99	68.874	Amphiprion_ocellaris
ENSODEG00000004466	CHD9	84	71.109	ENSAPEG00000009859	chd9	99	61.089	Amphiprion_percula
ENSODEG00000004466	CHD9	84	70.451	ENSATEG00000002748	chd9	99	62.026	Anabas_testudineus
ENSODEG00000004466	CHD9	99	83.206	ENSAPLG00000002826	CHD9	74	85.413	Anas_platyrhynchos
ENSODEG00000004466	CHD9	99	80.208	ENSACAG00000016150	CHD9	98	80.588	Anolis_carolinensis
ENSODEG00000004466	CHD9	99	94.551	ENSANAG00000015630	CHD9	98	97.080	Aotus_nancymaae
ENSODEG00000004466	CHD9	99	61.346	ENSAMXG00000005652	chd9	68	74.866	Astyanax_mexicanus
ENSODEG00000004466	CHD9	99	93.687	ENSBTAG00000002287	CHD9	99	93.791	Bos_taurus
ENSODEG00000004466	CHD9	99	94.416	ENSCJAG00000001573	CHD9	98	96.715	Callithrix_jacchus
ENSODEG00000004466	CHD9	99	94.656	ENSCAFG00000009699	CHD9	99	94.865	Canis_familiaris
ENSODEG00000004466	CHD9	99	94.656	ENSCAFG00020002879	CHD9	98	97.810	Canis_lupus_dingo
ENSODEG00000004466	CHD9	99	94.446	ENSTSYG00000007693	CHD9	98	97.445	Carlito_syrichta
ENSODEG00000004466	CHD9	79	88.623	ENSCAPG00000011604	CHD9	81	81.665	Cavia_aperea
ENSODEG00000004466	CHD9	100	93.347	ENSCPOG00000036544	CHD9	100	93.347	Cavia_porcellus
ENSODEG00000004466	CHD9	99	93.648	ENSCCAG00000036178	CHD9	98	95.985	Cebus_capucinus
ENSODEG00000004466	CHD9	99	93.687	ENSCATG00000036753	CHD9	98	96.715	Cercocebus_atys
ENSODEG00000004466	CHD9	100	97.690	ENSCLAG00000007137	CHD9	100	97.690	Chinchilla_lanigera
ENSODEG00000004466	CHD9	99	94.036	ENSCSAG00000005311	CHD9	99	94.521	Chlorocebus_sabaeus
ENSODEG00000004466	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSODEG00000004466	CHD9	92	91.625	ENSCPBG00000012459	CHD9	99	91.625	Chrysemys_picta_bellii
ENSODEG00000004466	CHD9	99	94.346	ENSCANG00000030349	CHD9	98	96.715	Colobus_angolensis_palliatus
ENSODEG00000004466	CHD9	99	91.768	ENSCGRG00001016150	Chd9	99	91.212	Cricetulus_griseus_chok1gshd
ENSODEG00000004466	CHD9	99	91.768	ENSCGRG00000012850	Chd9	99	95.607	Cricetulus_griseus_crigri
ENSODEG00000004466	CHD9	85	67.942	ENSCSEG00000009209	chd9	67	71.929	Cynoglossus_semilaevis
ENSODEG00000004466	CHD9	85	70.302	ENSCVAG00000016195	chd9	73	62.152	Cyprinodon_variegatus
ENSODEG00000004466	CHD9	81	68.434	ENSDARG00000074498	chd9	98	67.985	Danio_rerio
ENSODEG00000004466	CHD9	80	93.482	ENSDNOG00000006045	CHD9	99	93.696	Dasypus_novemcinctus
ENSODEG00000004466	CHD9	69	92.381	ENSDORG00000008523	-	99	93.133	Dipodomys_ordii
ENSODEG00000004466	CHD9	93	96.316	ENSETEG00000009565	CHD9	93	96.316	Echinops_telfairi
ENSODEG00000004466	CHD9	99	94.417	ENSEASG00005014832	CHD9	99	94.656	Equus_asinus_asinus
ENSODEG00000004466	CHD9	99	94.385	ENSECAG00000011505	CHD9	99	94.624	Equus_caballus
ENSODEG00000004466	CHD9	81	96.133	ENSEEUG00000014515	CHD9	86	96.133	Erinaceus_europaeus
ENSODEG00000004466	CHD9	78	71.883	ENSELUG00000006031	chd9	92	74.245	Esox_lucius
ENSODEG00000004466	CHD9	99	93.963	ENSFCAG00000022534	CHD9	98	97.445	Felis_catus
ENSODEG00000004466	CHD9	83	86.511	ENSFALG00000013276	CHD9	99	87.011	Ficedula_albicollis
ENSODEG00000004466	CHD9	100	96.484	ENSFDAG00000021037	CHD9	100	96.484	Fukomys_damarensis
ENSODEG00000004466	CHD9	85	69.803	ENSFHEG00000006068	chd9	87	66.930	Fundulus_heteroclitus
ENSODEG00000004466	CHD9	68	76.662	ENSGMOG00000006040	chd9	83	76.730	Gadus_morhua
ENSODEG00000004466	CHD9	96	84.156	ENSGALG00000039178	CHD9	98	84.480	Gallus_gallus
ENSODEG00000004466	CHD9	84	69.937	ENSGAFG00000010014	chd9	90	66.038	Gambusia_affinis
ENSODEG00000004466	CHD9	76	74.725	ENSGACG00000016694	chd9	96	74.542	Gasterosteus_aculeatus
ENSODEG00000004466	CHD9	99	94.173	ENSGGOG00000014816	CHD9	98	97.080	Gorilla_gorilla
ENSODEG00000004466	CHD9	84	70.643	ENSHBUG00000023322	chd9	96	69.474	Haplochromis_burtoni
ENSODEG00000004466	CHD9	100	96.346	ENSHGLG00000014938	CHD9	99	98.382	Heterocephalus_glaber_female
ENSODEG00000004466	CHD9	90	65.690	ENSHCOG00000000937	chd9	97	67.816	Hippocampus_comes
ENSODEG00000004466	CHD9	82	69.362	ENSIPUG00000016448	chd9	97	73.091	Ictalurus_punctatus
ENSODEG00000004466	CHD9	99	94.062	ENSSTOG00000022273	CHD9	99	97.110	Ictidomys_tridecemlineatus
ENSODEG00000004466	CHD9	69	92.474	ENSJJAG00000015741	-	99	92.674	Jaculus_jaculus
ENSODEG00000004466	CHD9	85	69.104	ENSKMAG00000016784	chd9	97	60.577	Kryptolebias_marmoratus
ENSODEG00000004466	CHD9	79	69.285	ENSLBEG00000012077	chd9	93	64.015	Labrus_bergylta
ENSODEG00000004466	CHD9	99	71.889	ENSLACG00000005557	CHD9	99	71.605	Latimeria_chalumnae
ENSODEG00000004466	CHD9	87	72.495	ENSLOCG00000007225	chd9	68	79.892	Lepisosteus_oculatus
ENSODEG00000004466	CHD9	99	93.410	ENSLAFG00000015374	CHD9	99	93.652	Loxodonta_africana
ENSODEG00000004466	CHD9	99	94.346	ENSMFAG00000041354	CHD9	98	96.715	Macaca_fascicularis
ENSODEG00000004466	CHD9	99	94.311	ENSMMUG00000016310	CHD9	98	96.715	Macaca_mulatta
ENSODEG00000004466	CHD9	99	94.244	ENSMNEG00000031494	CHD9	100	94.918	Macaca_nemestrina
ENSODEG00000004466	CHD9	99	94.311	ENSMLEG00000043219	CHD9	98	96.715	Mandrillus_leucophaeus
ENSODEG00000004466	CHD9	80	69.677	ENSMAMG00000003909	chd9	99	60.874	Mastacembelus_armatus
ENSODEG00000004466	CHD9	84	70.748	ENSMZEG00005006581	chd9	67	75.343	Maylandia_zebra
ENSODEG00000004466	CHD9	95	78.649	ENSMGAG00000004642	CHD9	72	80.258	Meleagris_gallopavo
ENSODEG00000004466	CHD9	99	94.171	ENSMICG00000016679	CHD9	98	97.080	Microcebus_murinus
ENSODEG00000004466	CHD9	73	81.362	ENSMODG00000013142	-	99	92.241	Monodelphis_domestica
ENSODEG00000004466	CHD9	84	69.646	ENSMALG00000013306	chd9	73	62.266	Monopterus_albus
ENSODEG00000004466	CHD9	100	90.248	MGP_CAROLIEiJ_G0031364	Chd9	100	90.283	Mus_caroli
ENSODEG00000004466	CHD9	99	89.309	ENSMUSG00000056608	Chd9	99	94.798	Mus_musculus
ENSODEG00000004466	CHD9	99	88.592	MGP_PahariEiJ_G0022964	Chd9	99	88.523	Mus_pahari
ENSODEG00000004466	CHD9	99	89.965	MGP_SPRETEiJ_G0032483	Chd9	99	89.965	Mus_spretus
ENSODEG00000004466	CHD9	99	93.824	ENSMPUG00000003285	CHD9	99	94.032	Mustela_putorius_furo
ENSODEG00000004466	CHD9	99	92.919	ENSMLUG00000004456	CHD9	99	93.301	Myotis_lucifugus
ENSODEG00000004466	CHD9	84	70.142	ENSNBRG00000009423	chd9	67	75.209	Neolamprologus_brichardi
ENSODEG00000004466	CHD9	90	94.638	ENSNLEG00000001026	CHD9	100	95.021	Nomascus_leucogenys
ENSODEG00000004466	CHD9	74	98.496	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSODEG00000004466	CHD9	83	100.000	ENSOPRG00000011168	CHD9	85	96.571	Ochotona_princeps
ENSODEG00000004466	CHD9	80	71.459	ENSONIG00000002816	chd9	96	62.550	Oreochromis_niloticus
ENSODEG00000004466	CHD9	99	86.071	ENSOANG00000013401	CHD9	99	86.521	Ornithorhynchus_anatinus
ENSODEG00000004466	CHD9	83	95.031	ENSOCUG00000001016	CHD9	98	95.532	Oryctolagus_cuniculus
ENSODEG00000004466	CHD9	84	69.698	ENSORLG00000013810	chd9	99	60.195	Oryzias_latipes
ENSODEG00000004466	CHD9	97	61.090	ENSORLG00020020665	chd9	99	60.583	Oryzias_latipes_hni
ENSODEG00000004466	CHD9	84	69.224	ENSORLG00015019126	chd9	95	69.158	Oryzias_latipes_hsok
ENSODEG00000004466	CHD9	99	94.277	ENSOGAG00000002110	CHD9	99	94.207	Otolemur_garnettii
ENSODEG00000004466	CHD9	99	93.486	ENSOARG00000017664	CHD9	99	93.624	Ovis_aries
ENSODEG00000004466	CHD9	82	93.808	ENSPPAG00000039388	-	99	94.184	Pan_paniscus
ENSODEG00000004466	CHD9	99	93.928	ENSPPRG00000004801	CHD9	98	97.080	Panthera_pardus
ENSODEG00000004466	CHD9	99	92.922	ENSPTIG00000021854	CHD9	99	93.095	Panthera_tigris_altaica
ENSODEG00000004466	CHD9	99	94.448	ENSPTRG00000008113	CHD9	98	97.080	Pan_troglodytes
ENSODEG00000004466	CHD9	99	94.277	ENSPANG00000019307	CHD9	98	96.715	Papio_anubis
ENSODEG00000004466	CHD9	97	62.630	ENSPKIG00000021876	chd9	68	76.478	Paramormyrops_kingsleyae
ENSODEG00000004466	CHD9	98	58.970	ENSPKIG00000025401	-	71	63.170	Paramormyrops_kingsleyae
ENSODEG00000004466	CHD9	64	84.495	ENSPSIG00000008099	CHD9	99	84.495	Pelodiscus_sinensis
ENSODEG00000004466	CHD9	59	57.004	ENSPMAG00000006035	-	72	67.444	Petromyzon_marinus
ENSODEG00000004466	CHD9	89	86.690	ENSPCIG00000017215	CHD9	97	89.281	Phascolarctos_cinereus
ENSODEG00000004466	CHD9	84	69.591	ENSPFOG00000015839	chd9	92	65.768	Poecilia_formosa
ENSODEG00000004466	CHD9	84	69.857	ENSPLAG00000011118	chd9	98	68.417	Poecilia_latipinna
ENSODEG00000004466	CHD9	84	70.133	ENSPMEG00000015106	chd9	95	66.016	Poecilia_mexicana
ENSODEG00000004466	CHD9	84	70.903	ENSPREG00000006473	chd9	98	67.900	Poecilia_reticulata
ENSODEG00000004466	CHD9	99	94.344	ENSPPYG00000007348	CHD9	99	94.656	Pongo_abelii
ENSODEG00000004466	CHD9	77	95.404	ENSPCAG00000007564	CHD9	86	95.404	Procavia_capensis
ENSODEG00000004466	CHD9	99	93.303	ENSPCOG00000028433	CHD9	98	98.175	Propithecus_coquereli
ENSODEG00000004466	CHD9	97	91.451	ENSPVAG00000015617	CHD9	97	92.123	Pteropus_vampyrus
ENSODEG00000004466	CHD9	84	70.886	ENSPNYG00000010947	chd9	66	75.209	Pundamilia_nyererei
ENSODEG00000004466	CHD9	84	70.521	ENSPNAG00000024141	chd9	97	61.165	Pygocentrus_nattereri
ENSODEG00000004466	CHD9	90	87.414	ENSRNOG00000049302	Chd9	100	89.651	Rattus_norvegicus
ENSODEG00000004466	CHD9	83	94.950	ENSRBIG00000035553	CHD9	98	96.715	Rhinopithecus_bieti
ENSODEG00000004466	CHD9	82	94.903	ENSRROG00000033278	CHD9	98	96.715	Rhinopithecus_roxellana
ENSODEG00000004466	CHD9	99	95.174	ENSSBOG00000030240	CHD9	99	95.174	Saimiri_boliviensis_boliviensis
ENSODEG00000004466	CHD9	99	87.093	ENSSHAG00000002719	CHD9	99	87.431	Sarcophilus_harrisii
ENSODEG00000004466	CHD9	97	62.526	ENSSFOG00015020209	chd9	68	76.816	Scleropages_formosus
ENSODEG00000004466	CHD9	86	66.902	ENSSFOG00015001327	chd9	67	75.780	Scleropages_formosus
ENSODEG00000004466	CHD9	84	69.080	ENSSMAG00000008953	chd9	95	68.536	Scophthalmus_maximus
ENSODEG00000004466	CHD9	84	70.319	ENSSDUG00000006139	chd9	98	68.521	Seriola_dumerili
ENSODEG00000004466	CHD9	84	70.805	ENSSLDG00000017818	chd9	98	68.989	Seriola_lalandi_dorsalis
ENSODEG00000004466	CHD9	71	97.006	ENSSARG00000010632	CHD9	71	97.006	Sorex_araneus
ENSODEG00000004466	CHD9	84	70.716	ENSSPAG00000021649	chd9	99	60.564	Stegastes_partitus
ENSODEG00000004466	CHD9	99	91.967	ENSSSCG00000033591	CHD9	75	95.133	Sus_scrofa
ENSODEG00000004466	CHD9	90	84.327	ENSTGUG00000007476	CHD9	100	84.748	Taeniopygia_guttata
ENSODEG00000004466	CHD9	69	75.643	ENSTRUG00000009125	chd9	73	62.319	Takifugu_rubripes
ENSODEG00000004466	CHD9	66	62.617	ENSTNIG00000003825	chd9	98	62.617	Tetraodon_nigroviridis
ENSODEG00000004466	CHD9	66	95.045	ENSTBEG00000016052	-	81	95.045	Tupaia_belangeri
ENSODEG00000004466	CHD9	90	93.527	ENSTTRG00000012674	CHD9	90	94.064	Tursiops_truncatus
ENSODEG00000004466	CHD9	64	93.283	ENSUAMG00000022706	CHD9	98	97.810	Ursus_americanus
ENSODEG00000004466	CHD9	90	92.328	ENSUMAG00000004043	CHD9	99	97.866	Ursus_maritimus
ENSODEG00000004466	CHD9	97	93.346	ENSVPAG00000001374	CHD9	97	93.634	Vicugna_pacos
ENSODEG00000004466	CHD9	99	94.691	ENSVVUG00000019435	CHD9	99	94.899	Vulpes_vulpes
ENSODEG00000004466	CHD9	99	73.092	ENSXETG00000000349	chd9	96	76.564	Xenopus_tropicalis
ENSODEG00000004466	CHD9	79	70.803	ENSXCOG00000012997	chd9	67	74.836	Xiphophorus_couchianus
ENSODEG00000004466	CHD9	84	70.299	ENSXMAG00000016192	chd9	98	60.380	Xiphophorus_maculatus