EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 861 bases
Position: chrJH651709.1:1410718-1411578
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006070	RNase_P_p30	PF01876.16	2.3e-34	1	2
ENSODEP00000006070	RNase_P_p30	PF01876.16	2.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006169	-	672	-	ENSODEP00000006070	223 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004560	-	98	73.384	ENSODEG00000004530	-	100	73.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004560	-	100	69.776	ENSG00000148688	RPP30	100	69.776	Homo_sapiens
ENSODEG00000004560	-	95	44.978	ENSAPOG00000023156	rpp30	97	44.978	Acanthochromis_polyacanthus
ENSODEG00000004560	-	100	69.776	ENSAMEG00000016776	RPP30	100	69.776	Ailuropoda_melanoleuca
ENSODEG00000004560	-	99	43.697	ENSACIG00000022810	rpp30	99	43.697	Amphilophus_citrinellus
ENSODEG00000004560	-	99	42.322	ENSAOCG00000016438	rpp30	89	42.322	Amphiprion_ocellaris
ENSODEG00000004560	-	99	42.322	ENSAPEG00000008697	rpp30	89	42.322	Amphiprion_percula
ENSODEG00000004560	-	90	44.130	ENSATEG00000015263	rpp30	89	44.130	Anabas_testudineus
ENSODEG00000004560	-	88	53.942	ENSAPLG00000009959	RPP30	100	53.942	Anas_platyrhynchos
ENSODEG00000004560	-	96	51.923	ENSACAG00000007996	RPP30	99	51.321	Anolis_carolinensis
ENSODEG00000004560	-	99	58.779	ENSANAG00000009439	RPP30	83	58.779	Aotus_nancymaae
ENSODEG00000004560	-	99	42.264	ENSACLG00000015389	-	99	42.264	Astatotilapia_calliptera
ENSODEG00000004560	-	99	44.403	ENSAMXG00000040653	rpp30	98	44.403	Astyanax_mexicanus
ENSODEG00000004560	-	99	69.663	ENSBTAG00000002973	RPP30	99	69.663	Bos_taurus
ENSODEG00000004560	-	100	72.269	ENSCJAG00000011045	RPP30	100	72.269	Callithrix_jacchus
ENSODEG00000004560	-	100	69.030	ENSCAFG00000031801	RPP30	100	69.030	Canis_familiaris
ENSODEG00000004560	-	100	77.311	ENSCAFG00020000258	RPP30	100	77.311	Canis_lupus_dingo
ENSODEG00000004560	-	99	65.543	ENSCHIG00000012901	RPP30	99	65.543	Capra_hircus
ENSODEG00000004560	-	100	69.030	ENSTSYG00000013903	RPP30	100	69.030	Carlito_syrichta
ENSODEG00000004560	-	87	61.058	ENSCAPG00000001326	RPP30	100	60.577	Cavia_aperea
ENSODEG00000004560	-	100	70.896	ENSCPOG00000033174	RPP30	100	70.896	Cavia_porcellus
ENSODEG00000004560	-	100	68.657	ENSCCAG00000029514	RPP30	100	68.657	Cebus_capucinus
ENSODEG00000004560	-	99	69.057	ENSCATG00000042072	RPP30	99	69.057	Cercocebus_atys
ENSODEG00000004560	-	100	72.015	ENSCLAG00000008595	RPP30	100	72.015	Chinchilla_lanigera
ENSODEG00000004560	-	99	69.663	ENSCSAG00000006694	RPP30	99	69.663	Chlorocebus_sabaeus
ENSODEG00000004560	-	99	56.981	ENSCPBG00000026518	RPP30	99	56.981	Chrysemys_picta_bellii
ENSODEG00000004560	-	83	30.472	ENSCSAVG00000011282	-	77	30.472	Ciona_savignyi
ENSODEG00000004560	-	99	69.663	ENSCANG00000041084	RPP30	99	69.663	Colobus_angolensis_palliatus
ENSODEG00000004560	-	85	67.982	ENSCGRG00001017068	-	96	67.982	Cricetulus_griseus_chok1gshd
ENSODEG00000004560	-	100	60.305	ENSCGRG00001000834	-	100	60.305	Cricetulus_griseus_chok1gshd
ENSODEG00000004560	-	100	60.687	ENSCGRG00000006196	-	100	60.687	Cricetulus_griseus_crigri
ENSODEG00000004560	-	100	69.030	ENSCGRG00000002508	-	100	69.030	Cricetulus_griseus_crigri
ENSODEG00000004560	-	99	38.828	ENSCSEG00000001779	rpp30	93	38.828	Cynoglossus_semilaevis
ENSODEG00000004560	-	99	42.963	ENSCVAG00000003139	rpp30	99	42.963	Cyprinodon_variegatus
ENSODEG00000004560	-	99	45.318	ENSDARG00000027428	rpp30	99	45.318	Danio_rerio
ENSODEG00000004560	-	100	69.403	ENSDNOG00000010186	RPP30	92	69.403	Dasypus_novemcinctus
ENSODEG00000004560	-	100	68.657	ENSDORG00000015333	Rpp30	100	68.657	Dipodomys_ordii
ENSODEG00000004560	-	83	30.222	FBgn0283652	Rpp30	75	30.222	Drosophila_melanogaster
ENSODEG00000004560	-	100	66.418	ENSETEG00000018823	RPP30	100	66.418	Echinops_telfairi
ENSODEG00000004560	-	99	69.663	ENSEASG00005011050	RPP30	99	69.663	Equus_asinus_asinus
ENSODEG00000004560	-	99	69.663	ENSECAG00000021917	RPP30	99	69.663	Equus_caballus
ENSODEG00000004560	-	97	55.172	ENSEEUG00000009986	-	99	55.172	Erinaceus_europaeus
ENSODEG00000004560	-	99	50.554	ENSELUG00000003731	rpp30	95	50.554	Esox_lucius
ENSODEG00000004560	-	100	69.776	ENSFCAG00000029073	RPP30	93	69.776	Felis_catus
ENSODEG00000004560	-	99	53.933	ENSFALG00000007711	RPP30	99	53.933	Ficedula_albicollis
ENSODEG00000004560	-	99	70.412	ENSFDAG00000019241	RPP30	99	70.412	Fukomys_damarensis
ENSODEG00000004560	-	90	40.650	ENSFHEG00000014739	rpp30	97	39.918	Fundulus_heteroclitus
ENSODEG00000004560	-	90	39.286	ENSGMOG00000005379	rpp30	100	38.889	Gadus_morhua
ENSODEG00000004560	-	100	53.731	ENSGALG00000006486	RPP30	93	68.103	Gallus_gallus
ENSODEG00000004560	-	95	41.634	ENSGAFG00000001445	rpp30	94	41.634	Gambusia_affinis
ENSODEG00000004560	-	99	41.367	ENSGACG00000010285	rpp30	100	47.534	Gasterosteus_aculeatus
ENSODEG00000004560	-	99	56.226	ENSGAGG00000000980	RPP30	69	56.226	Gopherus_agassizii
ENSODEG00000004560	-	100	73.529	ENSGGOG00000026917	RPP30	100	73.529	Gorilla_gorilla
ENSODEG00000004560	-	99	42.642	ENSHBUG00000019332	rpp30	99	42.642	Haplochromis_burtoni
ENSODEG00000004560	-	100	71.269	ENSHGLG00000013072	RPP30	100	71.269	Heterocephalus_glaber_female
ENSODEG00000004560	-	100	71.269	ENSHGLG00100017798	RPP30	100	71.269	Heterocephalus_glaber_male
ENSODEG00000004560	-	98	36.232	ENSHCOG00000004763	-	96	36.232	Hippocampus_comes
ENSODEG00000004560	-	99	49.378	ENSIPUG00000003863	rpp30	99	49.378	Ictalurus_punctatus
ENSODEG00000004560	-	99	69.663	ENSSTOG00000027002	RPP30	99	69.663	Ictidomys_tridecemlineatus
ENSODEG00000004560	-	100	69.403	ENSJJAG00000020041	Rpp30	100	69.403	Jaculus_jaculus
ENSODEG00000004560	-	99	39.925	ENSKMAG00000015355	rpp30	99	39.925	Kryptolebias_marmoratus
ENSODEG00000004560	-	99	39.852	ENSLBEG00000019989	rpp30	99	39.852	Labrus_bergylta
ENSODEG00000004560	-	69	42.009	ENSLACG00000002534	RPP30	96	42.009	Latimeria_chalumnae
ENSODEG00000004560	-	99	49.627	ENSLOCG00000000031	rpp30	99	49.627	Lepisosteus_oculatus
ENSODEG00000004560	-	100	69.030	ENSLAFG00000015931	RPP30	100	69.030	Loxodonta_africana
ENSODEG00000004560	-	99	69.663	ENSMFAG00000031109	RPP30	99	69.663	Macaca_fascicularis
ENSODEG00000004560	-	99	74.262	ENSMMUG00000006628	RPP30	99	74.262	Macaca_mulatta
ENSODEG00000004560	-	99	70.037	ENSMNEG00000033838	RPP30	94	83.051	Macaca_nemestrina
ENSODEG00000004560	-	99	69.663	ENSMLEG00000037578	RPP30	99	69.663	Mandrillus_leucophaeus
ENSODEG00000004560	-	99	43.173	ENSMAMG00000010934	rpp30	99	43.173	Mastacembelus_armatus
ENSODEG00000004560	-	99	42.642	ENSMZEG00005018508	-	99	42.642	Maylandia_zebra
ENSODEG00000004560	-	98	51.145	ENSMGAG00000008452	RPP30	100	50.752	Meleagris_gallopavo
ENSODEG00000004560	-	100	68.657	ENSMAUG00000008797	Rpp30	100	68.657	Mesocricetus_auratus
ENSODEG00000004560	-	100	69.776	ENSMICG00000012019	RPP30	100	69.776	Microcebus_murinus
ENSODEG00000004560	-	100	67.910	ENSMOCG00000016872	Rpp30	100	67.910	Microtus_ochrogaster
ENSODEG00000004560	-	99	39.623	ENSMMOG00000009266	rpp30	93	39.623	Mola_mola
ENSODEG00000004560	-	99	62.547	ENSMODG00000006863	-	99	62.547	Monodelphis_domestica
ENSODEG00000004560	-	99	67.511	ENSMODG00000009342	-	99	67.511	Monodelphis_domestica
ENSODEG00000004560	-	97	42.205	ENSMALG00000011718	rpp30	96	42.205	Monopterus_albus
ENSODEG00000004560	-	99	67.790	MGP_CAROLIEiJ_G0022902	Rpp30	99	67.790	Mus_caroli
ENSODEG00000004560	-	100	68.657	ENSMUSG00000024800	Rpp30	100	68.657	Mus_musculus
ENSODEG00000004560	-	100	67.164	MGP_PahariEiJ_G0014397	Rpp30	100	67.164	Mus_pahari
ENSODEG00000004560	-	100	68.657	MGP_SPRETEiJ_G0023821	Rpp30	100	68.657	Mus_spretus
ENSODEG00000004560	-	99	69.434	ENSMPUG00000017258	RPP30	93	69.434	Mustela_putorius_furo
ENSODEG00000004560	-	99	70.037	ENSMLUG00000017169	RPP30	99	70.037	Myotis_lucifugus
ENSODEG00000004560	-	100	70.522	ENSNGAG00000012018	-	100	70.522	Nannospalax_galili
ENSODEG00000004560	-	100	60.687	ENSNGAG00000014392	-	100	60.687	Nannospalax_galili
ENSODEG00000004560	-	90	36.555	ENSNBRG00000024170	-	91	36.555	Neolamprologus_brichardi
ENSODEG00000004560	-	100	73.950	ENSNLEG00000012383	RPP30	100	73.950	Nomascus_leucogenys
ENSODEG00000004560	-	99	54.909	ENSMEUG00000015587	-	100	54.909	Notamacropus_eugenii
ENSODEG00000004560	-	75	41.176	ENSONIG00000019140	rpp30	99	39.806	Oreochromis_niloticus
ENSODEG00000004560	-	99	60.674	ENSOANG00000003415	RPP30	99	60.674	Ornithorhynchus_anatinus
ENSODEG00000004560	-	100	69.403	ENSOCUG00000006896	RPP30	92	69.403	Oryctolagus_cuniculus
ENSODEG00000004560	-	94	43.426	ENSORLG00000020420	rpp30	87	43.426	Oryzias_latipes
ENSODEG00000004560	-	99	43.396	ENSORLG00020009037	-	99	43.396	Oryzias_latipes_hni
ENSODEG00000004560	-	99	43.396	ENSORLG00015008300	rpp30	93	43.396	Oryzias_latipes_hsok
ENSODEG00000004560	-	65	35.870	ENSOMEG00000012640	-	98	35.870	Oryzias_melastigma
ENSODEG00000004560	-	100	69.403	ENSOGAG00000013963	RPP30	100	69.403	Otolemur_garnettii
ENSODEG00000004560	-	97	64.504	ENSOARG00000015789	RPP30	97	64.751	Ovis_aries
ENSODEG00000004560	-	100	69.030	ENSPPAG00000043779	RPP30	100	69.030	Pan_paniscus
ENSODEG00000004560	-	100	70.149	ENSPPRG00000000115	RPP30	100	70.149	Panthera_pardus
ENSODEG00000004560	-	100	70.149	ENSPTIG00000014949	RPP30	100	70.149	Panthera_tigris_altaica
ENSODEG00000004560	-	100	73.529	ENSPTRG00000002742	RPP30	100	73.529	Pan_troglodytes
ENSODEG00000004560	-	99	74.262	ENSPANG00000021710	RPP30	99	74.262	Papio_anubis
ENSODEG00000004560	-	87	56.379	ENSPSIG00000013213	RPP30	99	56.379	Pelodiscus_sinensis
ENSODEG00000004560	-	85	34.081	ENSPMGG00000014872	rpp30	91	34.081	Periophthalmus_magnuspinnatus
ENSODEG00000004560	-	100	75.000	ENSPEMG00000001948	Rpp30	100	75.000	Peromyscus_maniculatus_bairdii
ENSODEG00000004560	-	99	61.423	ENSPCIG00000015730	RPP30	99	61.423	Phascolarctos_cinereus
ENSODEG00000004560	-	89	42.449	ENSPFOG00000000610	rpp30	91	42.449	Poecilia_formosa
ENSODEG00000004560	-	87	41.841	ENSPLAG00000003728	rpp30	83	41.841	Poecilia_latipinna
ENSODEG00000004560	-	89	41.224	ENSPMEG00000015692	rpp30	91	41.224	Poecilia_mexicana
ENSODEG00000004560	-	89	42.041	ENSPREG00000001536	rpp30	91	42.041	Poecilia_reticulata
ENSODEG00000004560	-	100	68.657	ENSPPYG00000002473	RPP30	100	68.657	Pongo_abelii
ENSODEG00000004560	-	100	69.776	ENSPCOG00000017865	RPP30	100	69.776	Propithecus_coquereli
ENSODEG00000004560	-	99	64.360	ENSPVAG00000010524	RPP30	94	64.360	Pteropus_vampyrus
ENSODEG00000004560	-	90	38.605	ENSPNYG00000016930	-	84	35.950	Pundamilia_nyererei
ENSODEG00000004560	-	99	48.134	ENSPNAG00000014804	rpp30	99	48.134	Pygocentrus_nattereri
ENSODEG00000004560	-	100	67.164	ENSRNOG00000018718	Rpp30	100	67.164	Rattus_norvegicus
ENSODEG00000004560	-	99	69.412	ENSRBIG00000036948	RPP30	85	69.412	Rhinopithecus_bieti
ENSODEG00000004560	-	50	74.576	ENSRROG00000043939	-	94	74.576	Rhinopithecus_roxellana
ENSODEG00000004560	-	99	63.889	ENSSBOG00000025405	RPP30	89	63.889	Saimiri_boliviensis_boliviensis
ENSODEG00000004560	-	100	61.111	ENSSHAG00000007452	RPP30	100	61.111	Sarcophilus_harrisii
ENSODEG00000004560	-	100	49.442	ENSSFOG00015012510	rpp30	99	49.627	Scleropages_formosus
ENSODEG00000004560	-	99	42.105	ENSSMAG00000013854	rpp30	95	42.105	Scophthalmus_maximus
ENSODEG00000004560	-	99	43.116	ENSSDUG00000015086	rpp30	98	43.116	Seriola_dumerili
ENSODEG00000004560	-	85	42.035	ENSSLDG00000021234	rpp30	90	42.035	Seriola_lalandi_dorsalis
ENSODEG00000004560	-	100	68.284	ENSSARG00000007110	RPP30	100	68.284	Sorex_araneus
ENSODEG00000004560	-	73	60.465	ENSSPUG00000000595	RPP30	98	60.465	Sphenodon_punctatus
ENSODEG00000004560	-	99	68.165	ENSSSCG00000010460	RPP30	99	68.165	Sus_scrofa
ENSODEG00000004560	-	88	55.187	ENSTGUG00000008399	RPP30	96	55.187	Taeniopygia_guttata
ENSODEG00000004560	-	100	39.781	ENSTNIG00000018540	rpp30	96	38.321	Tetraodon_nigroviridis
ENSODEG00000004560	-	82	69.683	ENSTBEG00000010734	RPP30	99	69.683	Tupaia_belangeri
ENSODEG00000004560	-	93	58.333	ENSTTRG00000014708	RPP30	92	58.333	Tursiops_truncatus
ENSODEG00000004560	-	65	61.749	ENSUAMG00000001045	RPP30	90	61.749	Ursus_americanus
ENSODEG00000004560	-	100	70.149	ENSUMAG00000000971	RPP30	100	70.149	Ursus_maritimus
ENSODEG00000004560	-	99	56.944	ENSVPAG00000002077	RPP30	100	56.944	Vicugna_pacos
ENSODEG00000004560	-	100	64.504	ENSVVUG00000021784	RPP30	100	64.504	Vulpes_vulpes
ENSODEG00000004560	-	87	54.622	ENSXETG00000021785	rpp30	88	54.622	Xenopus_tropicalis
ENSODEG00000004560	-	89	39.592	ENSXCOG00000017864	rpp30	90	39.592	Xiphophorus_couchianus