EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004649 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2092 bases
Position: chrJH651730.1:2945949-2948040
Accession: 101583361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006207	RRM_1	PF00076.22	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006306	PABPN1L-201	825	XM_004645029	ENSODEP00000006207	274 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004649	PABPN1L	60	46.961	ENSODEG00000011555	-	94	46.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004649	PABPN1L	100	62.329	ENSG00000205022	PABPN1L	100	62.671	Homo_sapiens
ENSODEG00000004649	PABPN1L	66	53.368	ENSACAG00000013250	PABPN1L	99	53.368	Anolis_carolinensis
ENSODEG00000004649	PABPN1L	100	58.188	ENSANAG00000038178	PABPN1L	100	59.028	Aotus_nancymaae
ENSODEG00000004649	PABPN1L	54	54.054	ENSAMXG00000010873	PABPN1L	58	54.545	Astyanax_mexicanus
ENSODEG00000004649	PABPN1L	92	60.853	ENSBTAG00000023752	-	100	60.204	Bos_taurus
ENSODEG00000004649	PABPN1L	100	58.246	ENSCJAG00000045284	PABPN1L	100	60.140	Callithrix_jacchus
ENSODEG00000004649	PABPN1L	100	58.249	ENSCHIG00000013987	PABPN1L	100	58.249	Capra_hircus
ENSODEG00000004649	PABPN1L	95	76.952	ENSCAPG00000007240	PABPN1L	99	78.810	Cavia_aperea
ENSODEG00000004649	PABPN1L	100	73.171	ENSCPOG00000025951	PABPN1L	100	75.610	Cavia_porcellus
ENSODEG00000004649	PABPN1L	100	58.885	ENSCCAG00000027631	PABPN1L	100	60.069	Cebus_capucinus
ENSODEG00000004649	PABPN1L	100	62.153	ENSCATG00000031060	PABPN1L	100	62.630	Cercocebus_atys
ENSODEG00000004649	PABPN1L	100	74.216	ENSCLAG00000000704	PABPN1L	100	74.913	Chinchilla_lanigera
ENSODEG00000004649	PABPN1L	100	60.000	ENSCSAG00000002881	PABPN1L	100	60.328	Chlorocebus_sabaeus
ENSODEG00000004649	PABPN1L	66	54.124	ENSCPBG00000023441	PABPN1L	61	55.670	Chrysemys_picta_bellii
ENSODEG00000004649	PABPN1L	100	61.246	ENSCANG00000039336	PABPN1L	100	62.069	Colobus_angolensis_palliatus
ENSODEG00000004649	PABPN1L	100	62.153	ENSCGRG00001013211	Pabpn1l	100	62.500	Cricetulus_griseus_chok1gshd
ENSODEG00000004649	PABPN1L	100	62.153	ENSCGRG00000015868	Pabpn1l	100	62.500	Cricetulus_griseus_crigri
ENSODEG00000004649	PABPN1L	100	55.160	ENSDNOG00000034677	PABPN1L	100	55.830	Dasypus_novemcinctus
ENSODEG00000004649	PABPN1L	100	62.807	ENSEASG00005000777	PABPN1L	98	65.314	Equus_asinus_asinus
ENSODEG00000004649	PABPN1L	100	62.807	ENSECAG00000000378	PABPN1L	100	62.807	Equus_caballus
ENSODEG00000004649	PABPN1L	100	53.333	ENSEEUG00000004747	PABPN1L	100	53.333	Erinaceus_europaeus
ENSODEG00000004649	PABPN1L	53	53.741	ENSELUG00000018385	PABPN1L	57	54.248	Esox_lucius
ENSODEG00000004649	PABPN1L	100	62.329	ENSFCAG00000010465	PABPN1L	100	63.699	Felis_catus
ENSODEG00000004649	PABPN1L	66	54.688	ENSFALG00000003319	PABPN1L	77	54.167	Ficedula_albicollis
ENSODEG00000004649	PABPN1L	100	71.579	ENSFDAG00000021067	PABPN1L	100	72.125	Fukomys_damarensis
ENSODEG00000004649	PABPN1L	50	63.758	ENSGALG00000006242	PABPN1L	85	63.758	Gallus_gallus
ENSODEG00000004649	PABPN1L	59	49.701	ENSGACG00000015428	PABPN1L	63	50.867	Gasterosteus_aculeatus
ENSODEG00000004649	PABPN1L	61	59.281	ENSGAGG00000010613	PABPN1L	55	59.281	Gopherus_agassizii
ENSODEG00000004649	PABPN1L	100	61.111	ENSGGOG00000012670	PABPN1L	100	62.630	Gorilla_gorilla
ENSODEG00000004649	PABPN1L	95	73.684	ENSHGLG00000014207	PABPN1L	98	75.564	Heterocephalus_glaber_female
ENSODEG00000004649	PABPN1L	95	73.684	ENSHGLG00100005230	PABPN1L	98	75.564	Heterocephalus_glaber_male
ENSODEG00000004649	PABPN1L	100	65.052	ENSSTOG00000020814	PABPN1L	100	65.398	Ictidomys_tridecemlineatus
ENSODEG00000004649	PABPN1L	100	60.208	ENSJJAG00000006433	Pabpn1l	100	60.208	Jaculus_jaculus
ENSODEG00000004649	PABPN1L	67	62.121	ENSLAFG00000025902	-	79	62.121	Loxodonta_africana
ENSODEG00000004649	PABPN1L	100	62.500	ENSMFAG00000002924	PABPN1L	100	62.976	Macaca_fascicularis
ENSODEG00000004649	PABPN1L	100	62.153	ENSMMUG00000012438	PABPN1L	100	62.630	Macaca_mulatta
ENSODEG00000004649	PABPN1L	100	62.500	ENSMNEG00000044808	PABPN1L	100	62.976	Macaca_nemestrina
ENSODEG00000004649	PABPN1L	100	62.500	ENSMLEG00000032667	PABPN1L	100	62.976	Mandrillus_leucophaeus
ENSODEG00000004649	PABPN1L	100	60.976	ENSMAUG00000014032	Pabpn1l	100	60.976	Mesocricetus_auratus
ENSODEG00000004649	PABPN1L	100	64.583	ENSMICG00000028179	PABPN1L	100	64.583	Microcebus_murinus
ENSODEG00000004649	PABPN1L	100	59.862	ENSMOCG00000007955	Pabpn1l	100	59.862	Microtus_ochrogaster
ENSODEG00000004649	PABPN1L	100	46.758	ENSMODG00000003873	-	100	47.782	Monodelphis_domestica
ENSODEG00000004649	PABPN1L	100	58.741	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	58.741	Mus_caroli
ENSODEG00000004649	PABPN1L	100	59.170	ENSMUSG00000069867	Pabpn1l	100	59.170	Mus_musculus
ENSODEG00000004649	PABPN1L	100	57.692	MGP_PahariEiJ_G0023268	Pabpn1l	100	57.692	Mus_pahari
ENSODEG00000004649	PABPN1L	100	58.392	MGP_SPRETEiJ_G0032788	Pabpn1l	100	58.392	Mus_spretus
ENSODEG00000004649	PABPN1L	95	50.368	ENSMLUG00000003228	PABPN1L	88	50.368	Myotis_lucifugus
ENSODEG00000004649	PABPN1L	100	64.460	ENSNGAG00000023992	Pabpn1l	100	64.460	Nannospalax_galili
ENSODEG00000004649	PABPN1L	100	61.458	ENSOPRG00000005597	PABPN1L	100	61.458	Ochotona_princeps
ENSODEG00000004649	PABPN1L	100	48.443	ENSOANG00000013901	PABPN1L	100	50.350	Ornithorhynchus_anatinus
ENSODEG00000004649	PABPN1L	63	52.023	ENSORLG00000026560	PABPN1L	65	52.023	Oryzias_latipes
ENSODEG00000004649	PABPN1L	63	52.023	ENSORLG00020015068	PABPN1L	65	52.023	Oryzias_latipes_hni
ENSODEG00000004649	PABPN1L	63	52.023	ENSORLG00015000397	PABPN1L	65	52.023	Oryzias_latipes_hsok
ENSODEG00000004649	PABPN1L	100	61.592	ENSOGAG00000000433	PABPN1L	100	62.847	Otolemur_garnettii
ENSODEG00000004649	PABPN1L	100	60.197	ENSOARG00000013682	PABPN1L	100	62.295	Ovis_aries
ENSODEG00000004649	PABPN1L	100	62.329	ENSPPAG00000028866	PABPN1L	100	62.671	Pan_paniscus
ENSODEG00000004649	PABPN1L	100	62.329	ENSPPRG00000015106	PABPN1L	100	63.699	Panthera_pardus
ENSODEG00000004649	PABPN1L	95	59.328	ENSPTIG00000015606	PABPN1L	100	59.328	Panthera_tigris_altaica
ENSODEG00000004649	PABPN1L	100	62.329	ENSPTRG00000031120	PABPN1L	100	62.671	Pan_troglodytes
ENSODEG00000004649	PABPN1L	100	62.500	ENSPANG00000026039	PABPN1L	100	62.976	Papio_anubis
ENSODEG00000004649	PABPN1L	66	52.792	ENSPSIG00000003404	PABPN1L	74	65.000	Pelodiscus_sinensis
ENSODEG00000004649	PABPN1L	100	62.021	ENSPEMG00000016624	Pabpn1l	100	62.021	Peromyscus_maniculatus_bairdii
ENSODEG00000004649	PABPN1L	100	61.168	ENSPPYG00000007655	PABPN1L	100	63.699	Pongo_abelii
ENSODEG00000004649	PABPN1L	100	62.500	ENSPCOG00000024077	PABPN1L	100	62.500	Propithecus_coquereli
ENSODEG00000004649	PABPN1L	100	59.524	ENSPVAG00000002716	PABPN1L	100	59.524	Pteropus_vampyrus
ENSODEG00000004649	PABPN1L	100	62.238	ENSRNOG00000029558	Pabpn1l	100	64.336	Rattus_norvegicus
ENSODEG00000004649	PABPN1L	100	63.542	ENSRBIG00000030740	PABPN1L	100	64.014	Rhinopithecus_bieti
ENSODEG00000004649	PABPN1L	99	61.324	ENSRROG00000035483	-	99	62.153	Rhinopithecus_roxellana
ENSODEG00000004649	PABPN1L	100	63.322	ENSRROG00000032240	-	100	63.322	Rhinopithecus_roxellana
ENSODEG00000004649	PABPN1L	100	59.582	ENSSBOG00000018410	PABPN1L	100	59.722	Saimiri_boliviensis_boliviensis
ENSODEG00000004649	PABPN1L	100	47.475	ENSSHAG00000010001	-	100	47.475	Sarcophilus_harrisii
ENSODEG00000004649	PABPN1L	89	51.029	ENSSARG00000005178	-	91	51.029	Sorex_araneus
ENSODEG00000004649	PABPN1L	65	54.922	ENSSPUG00000007031	PABPN1L	84	55.155	Sphenodon_punctatus
ENSODEG00000004649	PABPN1L	94	63.178	ENSSSCG00000036367	PABPN1L	100	61.856	Sus_scrofa
ENSODEG00000004649	PABPN1L	100	58.076	ENSTTRG00000004691	PABPN1L	100	60.481	Tursiops_truncatus
ENSODEG00000004649	PABPN1L	53	50.968	ENSXETG00000011258	pabpn1l	82	50.000	Xenopus_tropicalis