EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1843 bases
Position: chrJH651596.1:1088835-1090677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006343	zf-RanBP	PF00641.18	1.1e-06	1	1
ENSODEP00000006342	zf-RanBP	PF00641.18	1.1e-06	1	1
ENSODEP00000006341	zf-RanBP	PF00641.18	1.1e-06	1	1
ENSODEP00000006340	zf-RanBP	PF00641.18	1.4e-06	1	1
ENSODEP00000006340	RRM_1	PF00076.22	1.2e-08	1	1
ENSODEP00000006343	RRM_1	PF00076.22	1.6e-08	1	1
ENSODEP00000006342	RRM_1	PF00076.22	1.8e-08	1	1
ENSODEP00000006341	RRM_1	PF00076.22	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006442	-	1290	-	ENSODEP00000006340	429 (aa)	-	-
ENSODET00000006443	-	1563	-	ENSODEP00000006341	520 (aa)	-	-
ENSODET00000006444	-	1539	-	ENSODEP00000006342	512 (aa)	-	-
ENSODET00000006445	-	1476	-	ENSODEP00000006343	491 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004747	-	99	85.321	ENSODEG00000012915	-	99	83.409
ENSODEG00000004747	-	67	37.681	ENSODEG00000004433	-	55	39.106
ENSODEG00000004747	-	96	72.430	ENSODEG00000001772	-	100	67.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004747	-	100	78.319	ENSG00000270647	TAF15	100	80.176	Homo_sapiens
ENSODEG00000004747	-	76	86.968	ENSAMEG00000014860	TAF15	67	86.877	Ailuropoda_melanoleuca
ENSODEG00000004747	-	76	62.651	ENSAPLG00000006217	TAF15	89	65.647	Anas_platyrhynchos
ENSODEG00000004747	-	76	87.037	ENSANAG00000020904	TAF15	89	79.135	Aotus_nancymaae
ENSODEG00000004747	-	100	78.319	ENSCJAG00000014961	TAF15	100	80.396	Callithrix_jacchus
ENSODEG00000004747	-	76	87.798	ENSCAFG00000018176	TAF15	67	87.696	Canis_familiaris
ENSODEG00000004747	-	76	87.798	ENSCAFG00020004027	TAF15	69	87.532	Canis_lupus_dingo
ENSODEG00000004747	-	70	83.828	ENSCHIG00000019985	-	87	80.352	Capra_hircus
ENSODEG00000004747	-	76	87.798	ENSTSYG00000003930	TAF15	82	79.847	Carlito_syrichta
ENSODEG00000004747	-	98	78.032	ENSCAPG00000002530	-	97	80.046	Cavia_aperea
ENSODEG00000004747	-	98	77.346	ENSCPOG00000010259	-	96	79.587	Cavia_porcellus
ENSODEG00000004747	-	100	70.133	ENSCCAG00000036025	TAF15	100	74.229	Cebus_capucinus
ENSODEG00000004747	-	100	78.761	ENSCATG00000044848	TAF15	100	80.617	Cercocebus_atys
ENSODEG00000004747	-	75	88.267	ENSCLAG00000008940	TAF15	69	87.990	Chinchilla_lanigera
ENSODEG00000004747	-	75	87.766	ENSCSAG00000006241	TAF15	65	87.500	Chlorocebus_sabaeus
ENSODEG00000004747	-	75	83.200	ENSCHOG00000002729	TAF15	62	83.029	Choloepus_hoffmanni
ENSODEG00000004747	-	75	68.766	ENSCPBG00000027820	TAF15	87	70.256	Chrysemys_picta_bellii
ENSODEG00000004747	-	70	84.818	ENSCANG00000042639	-	86	84.566	Colobus_angolensis_palliatus
ENSODEG00000004747	-	100	74.365	ENSCANG00000038846	-	100	81.062	Colobus_angolensis_palliatus
ENSODEG00000004747	-	73	83.934	ENSCGRG00001012011	Taf15	76	80.189	Cricetulus_griseus_chok1gshd
ENSODEG00000004747	-	76	86.737	ENSCGRG00000005110	Taf15	79	84.055	Cricetulus_griseus_crigri
ENSODEG00000004747	-	76	87.533	ENSDNOG00000006956	TAF15	72	87.273	Dasypus_novemcinctus
ENSODEG00000004747	-	76	80.106	ENSDORG00000014619	Taf15	67	79.740	Dipodomys_ordii
ENSODEG00000004747	-	72	86.034	ENSETEG00000001337	TAF15	64	86.034	Echinops_telfairi
ENSODEG00000004747	-	99	81.136	ENSEASG00005011235	TAF15	99	79.101	Equus_asinus_asinus
ENSODEG00000004747	-	73	88.594	ENSECAG00000000718	TAF15	64	88.482	Equus_caballus
ENSODEG00000004747	-	99	79.458	ENSFCAG00000018167	TAF15	99	80.180	Felis_catus
ENSODEG00000004747	-	75	68.947	ENSFALG00000009696	TAF15	89	70.633	Ficedula_albicollis
ENSODEG00000004747	-	76	87.268	ENSFDAG00000008577	TAF15	76	85.714	Fukomys_damarensis
ENSODEG00000004747	-	75	65.291	ENSGALG00000002060	TAF15	89	66.588	Gallus_gallus
ENSODEG00000004747	-	100	78.097	ENSGGOG00000005693	TAF15	100	80.176	Gorilla_gorilla
ENSODEG00000004747	-	96	68.182	ENSHGLG00000002551	-	99	66.121	Heterocephalus_glaber_female
ENSODEG00000004747	-	76	87.533	ENSHGLG00000005292	-	78	84.161	Heterocephalus_glaber_female
ENSODEG00000004747	-	99	68.692	ENSHGLG00100002825	-	99	65.753	Heterocephalus_glaber_male
ENSODEG00000004747	-	76	87.533	ENSHGLG00100013953	-	82	85.751	Heterocephalus_glaber_male
ENSODEG00000004747	-	76	87.798	ENSSTOG00000002081	TAF15	68	87.532	Ictidomys_tridecemlineatus
ENSODEG00000004747	-	76	82.228	ENSJJAG00000010606	Taf15	66	87.705	Jaculus_jaculus
ENSODEG00000004747	-	79	52.278	ENSLACG00000018479	-	88	53.790	Latimeria_chalumnae
ENSODEG00000004747	-	76	86.472	ENSLAFG00000018332	TAF15	79	81.772	Loxodonta_africana
ENSODEG00000004747	-	77	86.816	ENSMFAG00000041941	TAF15	66	87.728	Macaca_fascicularis
ENSODEG00000004747	-	77	86.816	ENSMMUG00000047780	TAF15	68	86.544	Macaca_mulatta
ENSODEG00000004747	-	90	89.011	ENSMMUG00000047590	-	84	95.890	Macaca_mulatta
ENSODEG00000004747	-	100	78.761	ENSMNEG00000044227	TAF15	100	80.617	Macaca_nemestrina
ENSODEG00000004747	-	100	78.761	ENSMLEG00000028534	TAF15	100	80.617	Mandrillus_leucophaeus
ENSODEG00000004747	-	84	60.129	ENSMGAG00000003842	TAF15	86	62.896	Meleagris_gallopavo
ENSODEG00000004747	-	76	86.737	ENSMICG00000017057	TAF15	66	86.649	Microcebus_murinus
ENSODEG00000004747	-	76	86.243	ENSMOCG00000015121	Taf15	68	86.162	Microtus_ochrogaster
ENSODEG00000004747	-	76	82.540	ENSMODG00000019123	TAF15	86	83.551	Monodelphis_domestica
ENSODEG00000004747	-	80	85.965	MGP_CAROLIEiJ_G0016876	Taf15	76	79.771	Mus_caroli
ENSODEG00000004747	-	76	87.003	ENSMUSG00000020680	Taf15	69	86.753	Mus_musculus
ENSODEG00000004747	-	80	86.683	MGP_PahariEiJ_G0018007	Taf15	73	85.749	Mus_pahari
ENSODEG00000004747	-	75	85.714	MGP_SPRETEiJ_G0017720	Taf15	67	86.753	Mus_spretus
ENSODEG00000004747	-	75	86.933	ENSMPUG00000014948	TAF15	85	86.933	Mustela_putorius_furo
ENSODEG00000004747	-	76	87.533	ENSMLUG00000002870	TAF15	74	87.435	Myotis_lucifugus
ENSODEG00000004747	-	70	87.789	ENSNGAG00000017633	-	65	81.558	Nannospalax_galili
ENSODEG00000004747	-	99	72.311	ENSNGAG00000019473	-	100	70.655	Nannospalax_galili
ENSODEG00000004747	-	100	78.571	ENSNLEG00000014063	TAF15	100	79.295	Nomascus_leucogenys
ENSODEG00000004747	-	61	83.111	ENSMEUG00000006009	-	50	83.099	Notamacropus_eugenii
ENSODEG00000004747	-	75	68.150	ENSOANG00000014273	TAF15	83	68.623	Ornithorhynchus_anatinus
ENSODEG00000004747	-	72	88.594	ENSOCUG00000002838	TAF15	65	88.482	Oryctolagus_cuniculus
ENSODEG00000004747	-	76	86.737	ENSOGAG00000011719	TAF15	66	85.974	Otolemur_garnettii
ENSODEG00000004747	-	76	86.737	ENSOARG00000000081	-	74	86.649	Ovis_aries
ENSODEG00000004747	-	84	82.933	ENSOARG00000005512	-	87	85.242	Ovis_aries
ENSODEG00000004747	-	100	78.097	ENSPPAG00000043510	-	100	79.956	Pan_paniscus
ENSODEG00000004747	-	76	88.329	ENSPPRG00000003286	TAF15	67	88.052	Panthera_pardus
ENSODEG00000004747	-	99	84.055	ENSPTIG00000016445	TAF15	99	82.844	Panthera_tigris_altaica
ENSODEG00000004747	-	100	78.097	ENSPTRG00000009026	TAF15	100	79.956	Pan_troglodytes
ENSODEG00000004747	-	100	78.761	ENSPANG00000022930	TAF15	100	80.617	Papio_anubis
ENSODEG00000004747	-	75	67.013	ENSPSIG00000014222	TAF15	87	66.418	Pelodiscus_sinensis
ENSODEG00000004747	-	70	88.449	ENSPEMG00000018715	Taf15	66	87.705	Peromyscus_maniculatus_bairdii
ENSODEG00000004747	-	75	83.777	ENSPCIG00000003783	TAF15	70	84.635	Phascolarctos_cinereus
ENSODEG00000004747	-	76	86.243	ENSPPYG00000008194	TAF15	62	86.162	Pongo_abelii
ENSODEG00000004747	-	75	78.820	ENSPCAG00000009582	TAF15	68	73.995	Procavia_capensis
ENSODEG00000004747	-	76	87.268	ENSPCOG00000007032	TAF15	66	87.013	Propithecus_coquereli
ENSODEG00000004747	-	60	90.393	ENSPVAG00000003952	TAF15	50	90.171	Pteropus_vampyrus
ENSODEG00000004747	-	76	87.234	ENSRNOG00000058393	Taf15	68	87.173	Rattus_norvegicus
ENSODEG00000004747	-	76	87.234	ENSRNOG00000054871	LOC103694865	69	87.013	Rattus_norvegicus
ENSODEG00000004747	-	100	82.301	ENSRBIG00000043192	TAF15	100	80.617	Rhinopithecus_bieti
ENSODEG00000004747	-	100	82.301	ENSRROG00000029426	TAF15	100	80.617	Rhinopithecus_roxellana
ENSODEG00000004747	-	83	96.610	ENSSBOG00000019731	-	100	75.693	Saimiri_boliviensis_boliviensis
ENSODEG00000004747	-	63	75.185	ENSSBOG00000032185	-	64	90.094	Saimiri_boliviensis_boliviensis
ENSODEG00000004747	-	75	84.574	ENSSHAG00000003105	TAF15	83	76.978	Sarcophilus_harrisii
ENSODEG00000004747	-	86	84.112	ENSSARG00000012092	TAF15	67	86.494	Sorex_araneus
ENSODEG00000004747	-	80	55.819	ENSSPUG00000006042	TAF15	88	60.698	Sphenodon_punctatus
ENSODEG00000004747	-	76	87.533	ENSSSCG00000017707	TAF15	64	87.273	Sus_scrofa
ENSODEG00000004747	-	76	68.135	ENSTGUG00000004702	TAF15	92	69.367	Taeniopygia_guttata
ENSODEG00000004747	-	76	87.003	ENSTTRG00000014145	TAF15	69	86.911	Tursiops_truncatus
ENSODEG00000004747	-	81	83.024	ENSUAMG00000004942	TAF15	74	85.067	Ursus_americanus
ENSODEG00000004747	-	76	88.064	ENSUMAG00000016876	TAF15	68	87.792	Ursus_maritimus
ENSODEG00000004747	-	57	84.669	ENSVPAG00000001667	TAF15	51	84.416	Vicugna_pacos
ENSODEG00000004747	-	76	87.798	ENSVVUG00000020375	TAF15	69	87.532	Vulpes_vulpes