EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004758 (Gene tree)
Gene ID: 101589673
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 33758 bases
Position: chrJH651568.1:13880267-13914024
Accession: 101589673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006358	MMR_HSR1	PF01926.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006460	-	712	XM_004633339	ENSODEP00000006358	236 (aa)	XP_004633396	UPI0003339E8F

Gene Model

Click here to download ENSODEG00000004758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004758	-	53	30.159	ENSODEG00000010443	-	58	30.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004758	-	100	92.797	ENSG00000144840	RABL3	100	94.574	Homo_sapiens
ENSODEG00000004758	-	100	85.232	ENSAPOG00000024479	rabl3	100	85.232	Acanthochromis_polyacanthus
ENSODEG00000004758	-	100	93.220	ENSAMEG00000004809	RABL3	100	93.220	Ailuropoda_melanoleuca
ENSODEG00000004758	-	100	82.627	ENSACIG00000014343	rabl3	100	82.627	Amphilophus_citrinellus
ENSODEG00000004758	-	100	85.232	ENSAOCG00000011851	rabl3	100	85.232	Amphiprion_ocellaris
ENSODEG00000004758	-	100	85.232	ENSAPEG00000011214	rabl3	100	85.232	Amphiprion_percula
ENSODEG00000004758	-	100	86.017	ENSATEG00000003503	rabl3	100	86.017	Anabas_testudineus
ENSODEG00000004758	-	100	86.441	ENSACAG00000011313	-	100	86.441	Anolis_carolinensis
ENSODEG00000004758	-	100	94.068	ENSANAG00000027278	RABL3	100	94.068	Aotus_nancymaae
ENSODEG00000004758	-	100	85.169	ENSACLG00000009820	rabl3	100	85.169	Astatotilapia_calliptera
ENSODEG00000004758	-	100	85.593	ENSAMXG00000038716	rabl3	100	85.593	Astyanax_mexicanus
ENSODEG00000004758	-	100	94.068	ENSBTAG00000015898	RABL3	100	94.068	Bos_taurus
ENSODEG00000004758	-	100	94.068	ENSCJAG00000008611	RABL3	100	94.068	Callithrix_jacchus
ENSODEG00000004758	-	100	94.068	ENSCAFG00000011292	RABL3	89	94.068	Canis_familiaris
ENSODEG00000004758	-	100	94.068	ENSCAFG00020006397	RABL3	100	94.068	Canis_lupus_dingo
ENSODEG00000004758	-	100	94.068	ENSCHIG00000017365	RABL3	100	94.068	Capra_hircus
ENSODEG00000004758	-	100	98.305	ENSCPOG00000009645	RABL3	100	98.305	Cavia_porcellus
ENSODEG00000004758	-	100	92.373	ENSCATG00000032561	RABL3	100	92.373	Cercocebus_atys
ENSODEG00000004758	-	100	97.881	ENSCLAG00000010855	RABL3	100	97.881	Chinchilla_lanigera
ENSODEG00000004758	-	99	92.275	ENSCSAG00000007155	RABL3	100	92.275	Chlorocebus_sabaeus
ENSODEG00000004758	-	100	91.102	ENSCPBG00000001999	RABL3	100	91.102	Chrysemys_picta_bellii
ENSODEG00000004758	-	100	92.373	ENSCANG00000031684	RABL3	100	92.373	Colobus_angolensis_palliatus
ENSODEG00000004758	-	100	91.525	ENSCGRG00001021537	Rabl3	100	91.525	Cricetulus_griseus_chok1gshd
ENSODEG00000004758	-	100	91.525	ENSCGRG00000002114	Rabl3	100	91.525	Cricetulus_griseus_crigri
ENSODEG00000004758	-	100	74.153	ENSCSEG00000014982	rabl3	100	74.153	Cynoglossus_semilaevis
ENSODEG00000004758	-	100	71.610	ENSCVAG00000009904	rabl3	100	71.610	Cyprinodon_variegatus
ENSODEG00000004758	-	100	83.475	ENSDARG00000040959	rabl3	93	91.406	Danio_rerio
ENSODEG00000004758	-	100	92.373	ENSDNOG00000008174	RABL3	100	92.373	Dasypus_novemcinctus
ENSODEG00000004758	-	100	91.525	ENSETEG00000010206	RABL3	100	91.525	Echinops_telfairi
ENSODEG00000004758	-	100	94.492	ENSECAG00000023059	RABL3	100	94.492	Equus_caballus
ENSODEG00000004758	-	100	87.712	ENSEEUG00000002897	RABL3	100	87.712	Erinaceus_europaeus
ENSODEG00000004758	-	100	83.898	ENSELUG00000014758	rabl3	100	83.898	Esox_lucius
ENSODEG00000004758	-	100	93.220	ENSFCAG00000031879	RABL3	100	83.051	Felis_catus
ENSODEG00000004758	-	100	89.407	ENSFALG00000005296	RABL3	100	89.407	Ficedula_albicollis
ENSODEG00000004758	-	100	91.949	ENSFDAG00000000307	RABL3	100	91.949	Fukomys_damarensis
ENSODEG00000004758	-	100	84.322	ENSFHEG00000011273	rabl3	100	84.322	Fundulus_heteroclitus
ENSODEG00000004758	-	100	83.051	ENSGMOG00000007845	rabl3	100	83.051	Gadus_morhua
ENSODEG00000004758	-	100	90.678	ENSGALG00000014949	RABL3	100	90.678	Gallus_gallus
ENSODEG00000004758	-	100	83.051	ENSGAFG00000015953	rabl3	100	83.051	Gambusia_affinis
ENSODEG00000004758	-	100	84.322	ENSGACG00000007387	rabl3	100	90.698	Gasterosteus_aculeatus
ENSODEG00000004758	-	100	91.949	ENSGAGG00000003677	RABL3	100	91.949	Gopherus_agassizii
ENSODEG00000004758	-	100	92.797	ENSGGOG00000006059	RABL3	100	92.797	Gorilla_gorilla
ENSODEG00000004758	-	100	85.593	ENSHBUG00000019478	rabl3	93	85.593	Haplochromis_burtoni
ENSODEG00000004758	-	100	92.797	ENSHGLG00000014491	RABL3	100	92.797	Heterocephalus_glaber_female
ENSODEG00000004758	-	100	92.797	ENSHGLG00100004866	RABL3	100	92.797	Heterocephalus_glaber_male
ENSODEG00000004758	-	100	72.458	ENSHCOG00000019245	rabl3	100	72.458	Hippocampus_comes
ENSODEG00000004758	-	100	85.593	ENSIPUG00000012657	rabl3	100	85.593	Ictalurus_punctatus
ENSODEG00000004758	-	100	92.797	ENSSTOG00000019452	RABL3	100	92.797	Ictidomys_tridecemlineatus
ENSODEG00000004758	-	100	82.203	ENSJJAG00000023553	Rabl3	100	82.203	Jaculus_jaculus
ENSODEG00000004758	-	100	79.661	ENSKMAG00000015464	rabl3	100	79.661	Kryptolebias_marmoratus
ENSODEG00000004758	-	100	85.654	ENSLBEG00000020595	rabl3	100	85.654	Labrus_bergylta
ENSODEG00000004758	-	100	85.654	ENSLBEG00000010627	-	100	85.654	Labrus_bergylta
ENSODEG00000004758	-	100	86.864	ENSLOCG00000006265	rabl3	100	86.864	Lepisosteus_oculatus
ENSODEG00000004758	-	100	93.644	ENSLAFG00000003711	RABL3	100	93.644	Loxodonta_africana
ENSODEG00000004758	-	100	92.373	ENSMFAG00000031923	RABL3	100	92.373	Macaca_fascicularis
ENSODEG00000004758	-	100	82.203	ENSMMUG00000001594	RABL3	100	82.203	Macaca_mulatta
ENSODEG00000004758	-	100	92.373	ENSMNEG00000043980	RABL3	100	92.373	Macaca_nemestrina
ENSODEG00000004758	-	100	92.373	ENSMLEG00000028177	RABL3	100	92.373	Mandrillus_leucophaeus
ENSODEG00000004758	-	100	85.169	ENSMAMG00000015155	rabl3	100	85.169	Mastacembelus_armatus
ENSODEG00000004758	-	100	85.169	ENSMZEG00005002607	rabl3	100	85.169	Maylandia_zebra
ENSODEG00000004758	-	100	91.525	ENSMAUG00000013022	Rabl3	100	91.525	Mesocricetus_auratus
ENSODEG00000004758	-	100	93.644	ENSMICG00000049288	RABL3	100	93.644	Microcebus_murinus
ENSODEG00000004758	-	100	90.254	ENSMOCG00000015237	Rabl3	100	90.254	Microtus_ochrogaster
ENSODEG00000004758	-	100	82.627	ENSMMOG00000005628	rabl3	100	82.627	Mola_mola
ENSODEG00000004758	-	100	88.559	ENSMODG00000018232	RABL3	100	88.559	Monodelphis_domestica
ENSODEG00000004758	-	100	81.172	ENSMALG00000018837	rabl3	100	81.172	Monopterus_albus
ENSODEG00000004758	-	100	90.678	MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	Mus_caroli
ENSODEG00000004758	-	100	90.678	ENSMUSG00000022827	Rabl3	100	95.349	Mus_musculus
ENSODEG00000004758	-	100	89.831	MGP_PahariEiJ_G0016429	Rabl3	100	95.349	Mus_pahari
ENSODEG00000004758	-	100	90.678	MGP_SPRETEiJ_G0021628	Rabl3	100	95.349	Mus_spretus
ENSODEG00000004758	-	100	94.068	ENSMPUG00000008257	RABL3	89	94.068	Mustela_putorius_furo
ENSODEG00000004758	-	100	92.797	ENSMLUG00000014113	RABL3	100	92.797	Myotis_lucifugus
ENSODEG00000004758	-	98	82.328	ENSNGAG00000001939	Rabl3	100	82.328	Nannospalax_galili
ENSODEG00000004758	-	92	88.426	ENSNBRG00000012423	rabl3	92	88.426	Neolamprologus_brichardi
ENSODEG00000004758	-	100	92.373	ENSNLEG00000031723	RABL3	100	92.373	Nomascus_leucogenys
ENSODEG00000004758	-	100	89.831	ENSMEUG00000006606	RABL3	100	89.831	Notamacropus_eugenii
ENSODEG00000004758	-	100	86.017	ENSONIG00000004281	rabl3	100	86.017	Oreochromis_niloticus
ENSODEG00000004758	-	99	88.889	ENSOANG00000003928	RABL3	99	88.889	Ornithorhynchus_anatinus
ENSODEG00000004758	-	100	84.746	ENSORLG00000020457	rabl3	100	84.746	Oryzias_latipes
ENSODEG00000004758	-	100	84.746	ENSORLG00020008991	rabl3	100	81.780	Oryzias_latipes_hni
ENSODEG00000004758	-	100	84.746	ENSORLG00015005649	rabl3	88	84.746	Oryzias_latipes_hsok
ENSODEG00000004758	-	100	85.169	ENSOMEG00000015066	rabl3	100	85.169	Oryzias_melastigma
ENSODEG00000004758	-	100	93.644	ENSOGAG00000005961	RABL3	100	93.644	Otolemur_garnettii
ENSODEG00000004758	-	100	94.068	ENSOARG00000019939	RABL3	100	94.068	Ovis_aries
ENSODEG00000004758	-	94	91.892	ENSPPAG00000036997	RABL3	87	91.892	Pan_paniscus
ENSODEG00000004758	-	100	94.068	ENSPPRG00000016325	RABL3	100	94.068	Panthera_pardus
ENSODEG00000004758	-	100	94.068	ENSPTIG00000018021	RABL3	100	94.068	Panthera_tigris_altaica
ENSODEG00000004758	-	100	92.797	ENSPTRG00000015272	RABL3	100	92.797	Pan_troglodytes
ENSODEG00000004758	-	100	92.373	ENSPANG00000001339	RABL3	100	92.373	Papio_anubis
ENSODEG00000004758	-	100	86.017	ENSPKIG00000007818	rabl3	100	86.017	Paramormyrops_kingsleyae
ENSODEG00000004758	-	100	91.102	ENSPSIG00000011358	RABL3	100	91.102	Pelodiscus_sinensis
ENSODEG00000004758	-	100	83.475	ENSPMGG00000015794	rabl3	100	83.475	Periophthalmus_magnuspinnatus
ENSODEG00000004758	-	100	91.102	ENSPEMG00000016913	Rabl3	100	91.102	Peromyscus_maniculatus_bairdii
ENSODEG00000004758	-	100	90.254	ENSPCIG00000018922	RABL3	100	90.254	Phascolarctos_cinereus
ENSODEG00000004758	-	100	83.475	ENSPFOG00000008586	rabl3	100	83.475	Poecilia_formosa
ENSODEG00000004758	-	100	83.475	ENSPLAG00000014482	rabl3	100	83.475	Poecilia_latipinna
ENSODEG00000004758	-	100	83.475	ENSPMEG00000002295	rabl3	100	83.475	Poecilia_mexicana
ENSODEG00000004758	-	100	83.475	ENSPREG00000014815	rabl3	100	83.475	Poecilia_reticulata
ENSODEG00000004758	-	100	92.373	ENSPPYG00000013501	RABL3	100	92.373	Pongo_abelii
ENSODEG00000004758	-	100	94.068	ENSPCOG00000022230	RABL3	100	94.068	Propithecus_coquereli
ENSODEG00000004758	-	100	92.797	ENSPVAG00000010013	RABL3	100	92.797	Pteropus_vampyrus
ENSODEG00000004758	-	100	85.593	ENSPNYG00000006659	rabl3	100	85.593	Pundamilia_nyererei
ENSODEG00000004758	-	100	86.017	ENSPNAG00000000748	rabl3	100	86.017	Pygocentrus_nattereri
ENSODEG00000004758	-	100	90.678	ENSRNOG00000026085	Rabl3	100	90.678	Rattus_norvegicus
ENSODEG00000004758	-	100	92.373	ENSRBIG00000040941	RABL3	100	92.373	Rhinopithecus_bieti
ENSODEG00000004758	-	100	92.373	ENSRROG00000043745	RABL3	100	92.373	Rhinopithecus_roxellana
ENSODEG00000004758	-	100	94.068	ENSSBOG00000004022	RABL3	100	94.068	Saimiri_boliviensis_boliviensis
ENSODEG00000004758	-	100	90.678	ENSSHAG00000012233	RABL3	100	90.678	Sarcophilus_harrisii
ENSODEG00000004758	-	100	86.864	ENSSFOG00015010171	rabl3	100	86.864	Scleropages_formosus
ENSODEG00000004758	-	100	84.388	ENSSMAG00000002403	rabl3	100	84.388	Scophthalmus_maximus
ENSODEG00000004758	-	100	86.017	ENSSDUG00000012078	rabl3	100	86.017	Seriola_dumerili
ENSODEG00000004758	-	100	86.441	ENSSLDG00000021899	rabl3	100	86.441	Seriola_lalandi_dorsalis
ENSODEG00000004758	-	100	93.220	ENSSARG00000008316	RABL3	100	93.220	Sorex_araneus
ENSODEG00000004758	-	100	90.678	ENSSPUG00000017490	RABL3	100	90.678	Sphenodon_punctatus
ENSODEG00000004758	-	100	85.593	ENSSPAG00000011642	rabl3	100	85.593	Stegastes_partitus
ENSODEG00000004758	-	100	94.492	ENSSSCG00000035258	RABL3	100	94.492	Sus_scrofa
ENSODEG00000004758	-	100	89.831	ENSTGUG00000013374	RABL3	100	89.831	Taeniopygia_guttata
ENSODEG00000004758	-	81	83.505	ENSTRUG00000007846	RABL3	100	92.969	Takifugu_rubripes
ENSODEG00000004758	-	100	77.966	ENSTBEG00000005153	RABL3	100	77.966	Tupaia_belangeri
ENSODEG00000004758	-	100	92.797	ENSUAMG00000005299	RABL3	100	92.797	Ursus_americanus
ENSODEG00000004758	-	100	92.373	ENSUMAG00000025256	RABL3	89	92.373	Ursus_maritimus
ENSODEG00000004758	-	100	94.492	ENSVPAG00000003776	RABL3	100	94.492	Vicugna_pacos
ENSODEG00000004758	-	100	94.068	ENSVVUG00000022300	RABL3	89	94.068	Vulpes_vulpes
ENSODEG00000004758	-	100	83.475	ENSXMAG00000003244	rabl3	100	83.475	Xiphophorus_maculatus