EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004776 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: activated RNA polymerase II transcriptional coactivator p15 pseudogene
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 382 bases
Position: chrJH651601.1:4441740-4442121
Accession: 105742961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006378	PC4	PF02229.16	5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006480	-	357	-	ENSODEP00000006378	118 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004776	-	83	92.857	ENSODEG00000015114	-	79	92.857
ENSODEG00000004776	-	100	86.614	ENSODEG00000001937	-	100	86.614
ENSODEG00000004776	-	83	88.776	ENSODEG00000014558	-	65	88.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004776	-	99	64.800	ENSAMXG00000038560	-	99	64.800	Astyanax_mexicanus
ENSODEG00000004776	-	100	52.000	ENSCPBG00000010898	-	100	48.800	Chrysemys_picta_bellii
ENSODEG00000004776	-	100	34.921	ENSCING00000017560	-	69	40.909	Ciona_intestinalis
ENSODEG00000004776	-	100	57.937	ENSCSEG00000011154	-	100	57.937	Cynoglossus_semilaevis
ENSODEG00000004776	-	100	59.524	ENSCSEG00000009205	-	100	58.730	Cynoglossus_semilaevis
ENSODEG00000004776	-	100	61.905	ENSCVAG00000021573	-	73	61.905	Cyprinodon_variegatus
ENSODEG00000004776	-	100	79.661	ENSDORG00000026076	-	100	79.661	Dipodomys_ordii
ENSODEG00000004776	-	100	58.462	ENSELUG00000005136	TCP4	100	57.692	Esox_lucius
ENSODEG00000004776	-	77	65.217	ENSELUG00000022688	sub1	100	56.589	Esox_lucius
ENSODEG00000004776	-	100	61.905	ENSGMOG00000011659	-	100	61.905	Gadus_morhua
ENSODEG00000004776	-	100	62.698	ENSGAFG00000016251	-	100	63.780	Gambusia_affinis
ENSODEG00000004776	-	100	60.317	ENSKMAG00000013670	-	100	61.111	Kryptolebias_marmoratus
ENSODEG00000004776	-	99	63.492	ENSMMOG00000008698	-	99	60.000	Mola_mola
ENSODEG00000004776	-	100	80.508	ENSNGAG00000001935	-	83	82.203	Nannospalax_galili
ENSODEG00000004776	-	100	60.317	ENSONIG00000013958	-	100	60.317	Oreochromis_niloticus
ENSODEG00000004776	-	99	59.200	ENSORLG00000017237	sub1	99	59.200	Oryzias_latipes
ENSODEG00000004776	-	99	59.200	ENSORLG00020014865	sub1	99	59.200	Oryzias_latipes_hni
ENSODEG00000004776	-	99	59.200	ENSORLG00015005820	sub1	99	59.200	Oryzias_latipes_hsok
ENSODEG00000004776	-	99	56.800	ENSOMEG00000003351	-	99	59.200	Oryzias_melastigma
ENSODEG00000004776	-	99	61.111	ENSPMGG00000017654	-	99	61.905	Periophthalmus_magnuspinnatus
ENSODEG00000004776	-	100	62.698	ENSPFOG00000017101	-	100	63.780	Poecilia_formosa
ENSODEG00000004776	-	100	62.698	ENSPLAG00000015088	-	100	63.780	Poecilia_latipinna
ENSODEG00000004776	-	100	62.698	ENSPMEG00000023692	-	100	63.780	Poecilia_mexicana
ENSODEG00000004776	-	100	62.698	ENSPREG00000011918	-	100	63.780	Poecilia_reticulata
ENSODEG00000004776	-	100	61.905	ENSXCOG00000009356	-	100	62.992	Xiphophorus_couchianus
ENSODEG00000004776	-	100	61.905	ENSXMAG00000013353	-	100	62.992	Xiphophorus_maculatus