EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004841 (Gene tree)
Gene ID: 101561218
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 71068 bases
Position: chrJH651709.1:299559-370626
Accession: 101561218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006474	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006577	PRPF6-201	2760	XM_004644184	ENSODEP00000006474	919 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004841	PRPF6	100	92.667	ENSG00000101161	PRPF6	100	92.667	Homo_sapiens
ENSODEG00000004841	PRPF6	100	87.248	ENSAPOG00000010395	prpf6	96	87.673	Acanthochromis_polyacanthus
ENSODEG00000004841	PRPF6	100	91.507	ENSAMEG00000001916	PRPF6	99	91.507	Ailuropoda_melanoleuca
ENSODEG00000004841	PRPF6	100	86.929	ENSACIG00000019862	prpf6	96	87.354	Amphilophus_citrinellus
ENSODEG00000004841	PRPF6	100	87.141	ENSAOCG00000012988	prpf6	96	87.566	Amphiprion_ocellaris
ENSODEG00000004841	PRPF6	100	80.659	ENSAPEG00000008301	prpf6	100	80.978	Amphiprion_percula
ENSODEG00000004841	PRPF6	100	86.610	ENSATEG00000005581	prpf6	96	87.035	Anabas_testudineus
ENSODEG00000004841	PRPF6	100	92.030	ENSACAG00000006464	PRPF6	95	92.030	Anolis_carolinensis
ENSODEG00000004841	PRPF6	100	92.774	ENSANAG00000012661	PRPF6	100	92.774	Aotus_nancymaae
ENSODEG00000004841	PRPF6	100	86.823	ENSACLG00000025875	prpf6	96	87.248	Astatotilapia_calliptera
ENSODEG00000004841	PRPF6	99	87.340	ENSAMXG00000001929	prpf6	96	87.766	Astyanax_mexicanus
ENSODEG00000004841	PRPF6	100	92.561	ENSBTAG00000011656	PRPF6	100	92.561	Bos_taurus
ENSODEG00000004841	PRPF6	100	92.774	ENSCJAG00000010616	PRPF6	100	92.774	Callithrix_jacchus
ENSODEG00000004841	PRPF6	100	92.667	ENSCAFG00000013165	PRPF6	100	92.667	Canis_familiaris
ENSODEG00000004841	PRPF6	100	92.667	ENSCAFG00020002050	PRPF6	100	92.667	Canis_lupus_dingo
ENSODEG00000004841	PRPF6	100	92.561	ENSCHIG00000018187	PRPF6	100	92.561	Capra_hircus
ENSODEG00000004841	PRPF6	100	92.986	ENSTSYG00000007814	PRPF6	100	92.986	Carlito_syrichta
ENSODEG00000004841	PRPF6	97	92.803	ENSCAPG00000015077	PRPF6	100	92.366	Cavia_aperea
ENSODEG00000004841	PRPF6	100	93.730	ENSCPOG00000007518	PRPF6	100	93.730	Cavia_porcellus
ENSODEG00000004841	PRPF6	91	99.823	ENSCCAG00000024564	PRPF6	100	89.692	Cebus_capucinus
ENSODEG00000004841	PRPF6	100	92.561	ENSCATG00000037473	PRPF6	100	92.561	Cercocebus_atys
ENSODEG00000004841	PRPF6	100	89.692	ENSCLAG00000003854	PRPF6	100	89.692	Chinchilla_lanigera
ENSODEG00000004841	PRPF6	100	87.540	ENSCSAG00000016742	PRPF6	100	87.540	Chlorocebus_sabaeus
ENSODEG00000004841	PRPF6	84	72.520	ENSCHOG00000003315	-	98	72.066	Choloepus_hoffmanni
ENSODEG00000004841	PRPF6	100	91.817	ENSCPBG00000013964	PRPF6	96	92.242	Chrysemys_picta_bellii
ENSODEG00000004841	PRPF6	99	69.767	ENSCING00000008817	-	99	69.767	Ciona_intestinalis
ENSODEG00000004841	PRPF6	100	92.561	ENSCANG00000038230	PRPF6	100	92.561	Colobus_angolensis_palliatus
ENSODEG00000004841	PRPF6	100	93.518	ENSCGRG00001022666	Prpf6	100	93.518	Cricetulus_griseus_chok1gshd
ENSODEG00000004841	PRPF6	100	81.615	ENSCSEG00000018561	prpf6	100	82.040	Cynoglossus_semilaevis
ENSODEG00000004841	PRPF6	100	87.248	ENSCVAG00000010550	prpf6	96	87.673	Cyprinodon_variegatus
ENSODEG00000004841	PRPF6	100	86.929	ENSDARG00000091367	prpf6	99	87.354	Danio_rerio
ENSODEG00000004841	PRPF6	100	91.941	ENSDNOG00000040544	PRPF6	100	91.923	Dasypus_novemcinctus
ENSODEG00000004841	PRPF6	91	92.056	ENSDORG00000005406	Prpf6	100	92.056	Dipodomys_ordii
ENSODEG00000004841	PRPF6	99	67.597	FBgn0036828	CG6841	98	68.026	Drosophila_melanogaster
ENSODEG00000004841	PRPF6	85	90.756	ENSETEG00000004447	PRPF6	85	90.265	Echinops_telfairi
ENSODEG00000004841	PRPF6	99	81.760	ENSEBUG00000008835	prpf6	99	81.760	Eptatretus_burgeri
ENSODEG00000004841	PRPF6	100	92.561	ENSEASG00005023115	PRPF6	100	92.561	Equus_asinus_asinus
ENSODEG00000004841	PRPF6	100	94.450	ENSECAG00000013983	PRPF6	100	94.450	Equus_caballus
ENSODEG00000004841	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSODEG00000004841	PRPF6	100	85.866	ENSELUG00000001945	prpf6	93	85.866	Esox_lucius
ENSODEG00000004841	PRPF6	100	92.561	ENSFCAG00000001183	PRPF6	100	92.561	Felis_catus
ENSODEG00000004841	PRPF6	100	84.697	ENSFALG00000006046	-	97	84.697	Ficedula_albicollis
ENSODEG00000004841	PRPF6	100	92.136	ENSFALG00000010326	-	97	92.136	Ficedula_albicollis
ENSODEG00000004841	PRPF6	100	92.242	ENSFDAG00000006451	PRPF6	100	93.311	Fukomys_damarensis
ENSODEG00000004841	PRPF6	100	87.779	ENSFHEG00000000560	prpf6	96	87.779	Fundulus_heteroclitus
ENSODEG00000004841	PRPF6	100	83.932	ENSGMOG00000015622	prpf6	99	83.932	Gadus_morhua
ENSODEG00000004841	PRPF6	100	92.030	ENSGALG00000006001	PRPF6	100	92.030	Gallus_gallus
ENSODEG00000004841	PRPF6	100	82.678	ENSGAFG00000021109	prpf6	96	83.103	Gambusia_affinis
ENSODEG00000004841	PRPF6	100	85.654	ENSGACG00000002576	prpf6	99	85.654	Gasterosteus_aculeatus
ENSODEG00000004841	PRPF6	100	91.711	ENSGAGG00000008653	PRPF6	96	92.136	Gopherus_agassizii
ENSODEG00000004841	PRPF6	100	94.342	ENSGGOG00000016876	PRPF6	96	100.000	Gorilla_gorilla
ENSODEG00000004841	PRPF6	100	86.823	ENSHBUG00000004496	prpf6	96	87.248	Haplochromis_burtoni
ENSODEG00000004841	PRPF6	100	93.518	ENSHGLG00000009222	PRPF6	100	93.518	Heterocephalus_glaber_female
ENSODEG00000004841	PRPF6	97	93.348	ENSHGLG00100016600	PRPF6	100	93.348	Heterocephalus_glaber_male
ENSODEG00000004841	PRPF6	100	85.654	ENSHCOG00000011513	prpf6	96	86.079	Hippocampus_comes
ENSODEG00000004841	PRPF6	100	88.098	ENSIPUG00000004912	prpf6	96	88.098	Ictalurus_punctatus
ENSODEG00000004841	PRPF6	100	90.977	ENSSTOG00000002922	PRPF6	100	90.764	Ictidomys_tridecemlineatus
ENSODEG00000004841	PRPF6	100	93.730	ENSJJAG00000000836	Prpf6	100	93.730	Jaculus_jaculus
ENSODEG00000004841	PRPF6	100	86.716	ENSKMAG00000017800	prpf6	96	87.141	Kryptolebias_marmoratus
ENSODEG00000004841	PRPF6	100	86.291	ENSLBEG00000012582	prpf6	96	86.291	Labrus_bergylta
ENSODEG00000004841	PRPF6	100	88.842	ENSLOCG00000004827	prpf6	96	87.885	Lepisosteus_oculatus
ENSODEG00000004841	PRPF6	100	92.128	ENSLAFG00000005272	PRPF6	100	92.128	Loxodonta_africana
ENSODEG00000004841	PRPF6	100	92.561	ENSMFAG00000037542	PRPF6	96	100.000	Macaca_fascicularis
ENSODEG00000004841	PRPF6	100	85.987	ENSMMUG00000015558	PRPF6	99	98.142	Macaca_mulatta
ENSODEG00000004841	PRPF6	100	78.284	ENSMNEG00000045555	PRPF6	100	78.284	Macaca_nemestrina
ENSODEG00000004841	PRPF6	100	86.929	ENSMAMG00000010718	prpf6	96	87.354	Mastacembelus_armatus
ENSODEG00000004841	PRPF6	100	86.306	ENSMZEG00005015261	-	99	86.730	Maylandia_zebra
ENSODEG00000004841	PRPF6	94	85.941	ENSMZEG00005026539	prpf6	100	86.395	Maylandia_zebra
ENSODEG00000004841	PRPF6	97	91.930	ENSMGAG00000006634	PRPF6	100	91.930	Meleagris_gallopavo
ENSODEG00000004841	PRPF6	100	93.624	ENSMAUG00000013969	Prpf6	100	93.624	Mesocricetus_auratus
ENSODEG00000004841	PRPF6	87	91.869	ENSMICG00000017793	PRPF6	98	91.759	Microcebus_murinus
ENSODEG00000004841	PRPF6	100	93.518	ENSMOCG00000001701	Prpf6	100	93.518	Microtus_ochrogaster
ENSODEG00000004841	PRPF6	100	85.972	ENSMMOG00000020419	prpf6	100	86.397	Mola_mola
ENSODEG00000004841	PRPF6	97	92.109	ENSMODG00000017051	PRPF6	99	92.109	Monodelphis_domestica
ENSODEG00000004841	PRPF6	99	87.003	ENSMALG00000000089	prpf6	100	87.003	Monopterus_albus
ENSODEG00000004841	PRPF6	100	86.929	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSODEG00000004841	PRPF6	100	93.624	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSODEG00000004841	PRPF6	100	93.624	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSODEG00000004841	PRPF6	100	93.624	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSODEG00000004841	PRPF6	91	91.418	ENSMPUG00000008673	PRPF6	99	91.418	Mustela_putorius_furo
ENSODEG00000004841	PRPF6	100	93.624	ENSNGAG00000003365	Prpf6	100	93.624	Nannospalax_galili
ENSODEG00000004841	PRPF6	100	86.929	ENSNBRG00000015025	prpf6	96	87.354	Neolamprologus_brichardi
ENSODEG00000004841	PRPF6	100	92.561	ENSNLEG00000010208	PRPF6	96	98.053	Nomascus_leucogenys
ENSODEG00000004841	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSODEG00000004841	PRPF6	100	86.823	ENSONIG00000017406	prpf6	96	87.248	Oreochromis_niloticus
ENSODEG00000004841	PRPF6	100	92.455	ENSOANG00000004920	PRPF6	100	92.455	Ornithorhynchus_anatinus
ENSODEG00000004841	PRPF6	99	91.416	ENSOCUG00000014151	PRPF6	100	91.416	Oryctolagus_cuniculus
ENSODEG00000004841	PRPF6	100	86.716	ENSORLG00000009592	prpf6	96	86.716	Oryzias_latipes
ENSODEG00000004841	PRPF6	100	86.823	ENSORLG00020001458	prpf6	96	86.823	Oryzias_latipes_hni
ENSODEG00000004841	PRPF6	100	86.823	ENSORLG00015018762	prpf6	96	86.823	Oryzias_latipes_hsok
ENSODEG00000004841	PRPF6	100	86.716	ENSOMEG00000012174	prpf6	96	87.141	Oryzias_melastigma
ENSODEG00000004841	PRPF6	100	85.381	ENSOGAG00000007573	PRPF6	100	85.381	Otolemur_garnettii
ENSODEG00000004841	PRPF6	100	92.136	ENSOARG00000008776	PRPF6	99	92.136	Ovis_aries
ENSODEG00000004841	PRPF6	100	92.667	ENSPPAG00000008686	PRPF6	96	100.000	Pan_paniscus
ENSODEG00000004841	PRPF6	100	92.561	ENSPPRG00000008497	PRPF6	100	92.561	Panthera_pardus
ENSODEG00000004841	PRPF6	97	92.366	ENSPTIG00000011184	PRPF6	97	92.366	Panthera_tigris_altaica
ENSODEG00000004841	PRPF6	100	92.667	ENSPTRG00000013765	PRPF6	96	100.000	Pan_troglodytes
ENSODEG00000004841	PRPF6	100	92.030	ENSPANG00000024135	PRPF6	100	92.030	Papio_anubis
ENSODEG00000004841	PRPF6	100	88.417	ENSPKIG00000005627	prpf6	99	88.842	Paramormyrops_kingsleyae
ENSODEG00000004841	PRPF6	94	91.950	ENSPSIG00000007717	PRPF6	100	91.950	Pelodiscus_sinensis
ENSODEG00000004841	PRPF6	100	84.607	ENSPMGG00000008925	prpf6	96	84.820	Periophthalmus_magnuspinnatus
ENSODEG00000004841	PRPF6	100	93.518	ENSPEMG00000016036	Prpf6	100	93.518	Peromyscus_maniculatus_bairdii
ENSODEG00000004841	PRPF6	99	82.891	ENSPMAG00000006144	prpf6	99	82.891	Petromyzon_marinus
ENSODEG00000004841	PRPF6	100	92.667	ENSPCIG00000017909	PRPF6	100	92.667	Phascolarctos_cinereus
ENSODEG00000004841	PRPF6	100	87.354	ENSPFOG00000006431	prpf6	96	87.779	Poecilia_formosa
ENSODEG00000004841	PRPF6	100	87.248	ENSPLAG00000005974	prpf6	96	87.673	Poecilia_latipinna
ENSODEG00000004841	PRPF6	100	87.460	ENSPMEG00000009977	prpf6	96	87.885	Poecilia_mexicana
ENSODEG00000004841	PRPF6	100	87.354	ENSPREG00000017993	prpf6	92	87.779	Poecilia_reticulata
ENSODEG00000004841	PRPF6	100	92.136	ENSPPYG00000011256	PRPF6	100	92.136	Pongo_abelii
ENSODEG00000004841	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSODEG00000004841	PRPF6	100	92.683	ENSPCOG00000016881	PRPF6	100	92.683	Propithecus_coquereli
ENSODEG00000004841	PRPF6	100	86.044	ENSPVAG00000014316	PRPF6	100	86.044	Pteropus_vampyrus
ENSODEG00000004841	PRPF6	100	81.059	ENSPNYG00000001939	prpf6	70	81.059	Pundamilia_nyererei
ENSODEG00000004841	PRPF6	100	87.460	ENSPNAG00000015606	prpf6	96	87.885	Pygocentrus_nattereri
ENSODEG00000004841	PRPF6	100	93.518	ENSRNOG00000051498	Prpf6	100	93.518	Rattus_norvegicus
ENSODEG00000004841	PRPF6	100	92.561	ENSRBIG00000043613	PRPF6	98	98.270	Rhinopithecus_bieti
ENSODEG00000004841	PRPF6	100	89.418	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSODEG00000004841	PRPF6	91	95.398	ENSSBOG00000020632	PRPF6	91	95.398	Saimiri_boliviensis_boliviensis
ENSODEG00000004841	PRPF6	100	92.667	ENSSHAG00000016810	PRPF6	100	92.667	Sarcophilus_harrisii
ENSODEG00000004841	PRPF6	99	88.614	ENSSFOG00015020859	prpf6	100	89.044	Scleropages_formosus
ENSODEG00000004841	PRPF6	100	86.185	ENSSMAG00000008112	prpf6	96	86.185	Scophthalmus_maximus
ENSODEG00000004841	PRPF6	100	86.823	ENSSDUG00000016142	prpf6	96	87.248	Seriola_dumerili
ENSODEG00000004841	PRPF6	100	86.823	ENSSLDG00000025283	prpf6	100	83.741	Seriola_lalandi_dorsalis
ENSODEG00000004841	PRPF6	94	90.476	ENSSPUG00000018260	PRPF6	100	90.476	Sphenodon_punctatus
ENSODEG00000004841	PRPF6	100	86.823	ENSSPAG00000015850	prpf6	96	87.248	Stegastes_partitus
ENSODEG00000004841	PRPF6	100	92.349	ENSSSCG00000029119	PRPF6	100	91.837	Sus_scrofa
ENSODEG00000004841	PRPF6	100	92.242	ENSTGUG00000007221	PRPF6	99	92.242	Taeniopygia_guttata
ENSODEG00000004841	PRPF6	100	85.760	ENSTRUG00000002920	prpf6	96	86.185	Takifugu_rubripes
ENSODEG00000004841	PRPF6	100	79.493	ENSTNIG00000017873	prpf6	100	79.915	Tetraodon_nigroviridis
ENSODEG00000004841	PRPF6	88	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSODEG00000004841	PRPF6	100	91.923	ENSTTRG00000013068	PRPF6	100	91.923	Tursiops_truncatus
ENSODEG00000004841	PRPF6	98	90.870	ENSUMAG00000021631	PRPF6	98	90.870	Ursus_maritimus
ENSODEG00000004841	PRPF6	100	92.667	ENSVVUG00000014948	PRPF6	100	92.667	Vulpes_vulpes
ENSODEG00000004841	PRPF6	100	89.798	ENSXETG00000012054	prpf6	97	90.436	Xenopus_tropicalis
ENSODEG00000004841	PRPF6	100	87.460	ENSXCOG00000008082	prpf6	96	87.885	Xiphophorus_couchianus
ENSODEG00000004841	PRPF6	100	87.460	ENSXMAG00000015581	prpf6	96	87.885	Xiphophorus_maculatus