EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004873 (Gene tree)
Gene ID: 101575248
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 11171 bases
Position: chrJH651673.1:3848361-3859531
Accession: 101575248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006523	RRM_1	PF00076.22	6.4e-38	1	3
ENSODEP00000006523	RRM_1	PF00076.22	6.4e-38	2	3
ENSODEP00000006523	RRM_1	PF00076.22	6.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006627	RBM47-201	2391	XM_004642649	ENSODEP00000006523	591 (aa)	XP_004642706	UPI00033376FB

Gene Model

Click here to download ENSODEG00000004873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004873	RBM47	53	39.048	ENSODEG00000005445	-	73	35.749
ENSODEG00000004873	RBM47	52	52.077	ENSODEG00000004900	-	66	48.312
ENSODEG00000004873	RBM47	52	54.194	ENSODEG00000008768	SYNCRIP	73	56.731
ENSODEG00000004873	RBM47	53	70.159	ENSODEG00000018002	-	59	72.607
ENSODEG00000004873	RBM47	51	72.667	ENSODEG00000000735	-	64	72.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004873	RBM47	100	94.622	ENSG00000163694	RBM47	100	96.800	Homo_sapiens
ENSODEG00000004873	RBM47	100	77.759	ENSAPOG00000011062	rbm47	93	84.225	Acanthochromis_polyacanthus
ENSODEG00000004873	RBM47	100	94.137	ENSAMEG00000009672	RBM47	100	94.137	Ailuropoda_melanoleuca
ENSODEG00000004873	RBM47	100	77.983	ENSACIG00000011531	rbm47	100	76.134	Amphilophus_citrinellus
ENSODEG00000004873	RBM47	100	77.983	ENSAOCG00000022245	rbm47	93	84.225	Amphiprion_ocellaris
ENSODEG00000004873	RBM47	100	77.983	ENSAPEG00000018304	rbm47	93	84.225	Amphiprion_percula
ENSODEG00000004873	RBM47	100	77.011	ENSATEG00000018400	rbm47	94	77.739	Anabas_testudineus
ENSODEG00000004873	RBM47	100	87.205	ENSAPLG00000013974	RBM47	100	86.869	Anas_platyrhynchos
ENSODEG00000004873	RBM47	100	84.808	ENSACAG00000011833	RBM47	100	85.142	Anolis_carolinensis
ENSODEG00000004873	RBM47	100	94.286	ENSANAG00000029440	RBM47	100	96.000	Aotus_nancymaae
ENSODEG00000004873	RBM47	100	76.885	ENSACLG00000016902	rbm47	94	84.789	Astatotilapia_calliptera
ENSODEG00000004873	RBM47	100	75.327	ENSAMXG00000021794	rbm47	95	75.952	Astyanax_mexicanus
ENSODEG00000004873	RBM47	100	96.791	ENSBTAG00000002356	RBM47	100	96.791	Bos_taurus
ENSODEG00000004873	RBM47	100	94.078	ENSCJAG00000019385	RBM47	100	95.733	Callithrix_jacchus
ENSODEG00000004873	RBM47	96	93.860	ENSCAFG00000015898	RBM47	100	92.424	Canis_familiaris
ENSODEG00000004873	RBM47	83	95.714	ENSCAFG00020010558	RBM47	94	94.164	Canis_lupus_dingo
ENSODEG00000004873	RBM47	100	97.128	ENSCHIG00000026214	RBM47	100	97.128	Capra_hircus
ENSODEG00000004873	RBM47	86	78.824	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSODEG00000004873	RBM47	100	90.709	ENSCAPG00000008426	RBM47	100	95.946	Cavia_aperea
ENSODEG00000004873	RBM47	100	97.804	ENSCPOG00000014100	RBM47	100	97.867	Cavia_porcellus
ENSODEG00000004873	RBM47	100	94.078	ENSCCAG00000030129	-	100	95.733	Cebus_capucinus
ENSODEG00000004873	RBM47	99	66.330	ENSCCAG00000024397	-	99	64.141	Cebus_capucinus
ENSODEG00000004873	RBM47	100	95.601	ENSCATG00000042064	RBM47	100	96.800	Cercocebus_atys
ENSODEG00000004873	RBM47	100	98.477	ENSCLAG00000001684	RBM47	100	99.320	Chinchilla_lanigera
ENSODEG00000004873	RBM47	100	94.790	ENSCSAG00000017060	RBM47	100	94.286	Chlorocebus_sabaeus
ENSODEG00000004873	RBM47	88	88.964	ENSCHOG00000011731	RBM47	88	88.764	Choloepus_hoffmanni
ENSODEG00000004873	RBM47	100	89.262	ENSCPBG00000013831	RBM47	100	89.094	Chrysemys_picta_bellii
ENSODEG00000004873	RBM47	100	94.924	ENSCANG00000019997	RBM47	100	96.533	Colobus_angolensis_palliatus
ENSODEG00000004873	RBM47	100	63.967	ENSCGRG00001020102	-	100	88.889	Cricetulus_griseus_chok1gshd
ENSODEG00000004873	RBM47	100	91.960	ENSCGRG00001000623	-	100	93.351	Cricetulus_griseus_chok1gshd
ENSODEG00000004873	RBM47	100	91.122	ENSCGRG00000007762	-	100	91.772	Cricetulus_griseus_crigri
ENSODEG00000004873	RBM47	100	63.802	ENSCGRG00000014760	-	100	88.360	Cricetulus_griseus_crigri
ENSODEG00000004873	RBM47	100	76.047	ENSCSEG00000004545	rbm47	100	74.204	Cynoglossus_semilaevis
ENSODEG00000004873	RBM47	100	75.421	ENSCVAG00000020144	rbm47	93	83.898	Cyprinodon_variegatus
ENSODEG00000004873	RBM47	100	75.987	ENSDARG00000061985	rbm47	95	77.043	Danio_rerio
ENSODEG00000004873	RBM47	100	92.399	ENSDNOG00000046854	RBM47	100	92.736	Dasypus_novemcinctus
ENSODEG00000004873	RBM47	100	93.478	ENSDORG00000010144	Rbm47	100	92.642	Dipodomys_ordii
ENSODEG00000004873	RBM47	100	93.300	ENSETEG00000009194	RBM47	100	92.295	Echinops_telfairi
ENSODEG00000004873	RBM47	99	57.711	ENSEBUG00000011912	rbm47	95	59.233	Eptatretus_burgeri
ENSODEG00000004873	RBM47	100	97.297	ENSEASG00005008443	RBM47	100	97.297	Equus_asinus_asinus
ENSODEG00000004873	RBM47	100	97.297	ENSECAG00000004400	RBM47	100	97.297	Equus_caballus
ENSODEG00000004873	RBM47	75	94.805	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSODEG00000004873	RBM47	100	73.701	ENSELUG00000006148	rbm47	93	85.515	Esox_lucius
ENSODEG00000004873	RBM47	100	96.785	ENSFCAG00000012399	RBM47	100	96.785	Felis_catus
ENSODEG00000004873	RBM47	100	89.262	ENSFALG00000002861	RBM47	100	88.758	Ficedula_albicollis
ENSODEG00000004873	RBM47	100	94.416	ENSFDAG00000016326	RBM47	100	94.416	Fukomys_damarensis
ENSODEG00000004873	RBM47	100	75.966	ENSFHEG00000007938	rbm47	100	74.286	Fundulus_heteroclitus
ENSODEG00000004873	RBM47	100	74.230	ENSGMOG00000014802	rbm47	94	75.737	Gadus_morhua
ENSODEG00000004873	RBM47	63	90.691	ENSGALG00000014267	RBM47	100	90.451	Gallus_gallus
ENSODEG00000004873	RBM47	63	82.133	ENSGAFG00000020571	rbm47	98	79.521	Gambusia_affinis
ENSODEG00000004873	RBM47	100	74.632	ENSGACG00000016223	rbm47	93	82.817	Gasterosteus_aculeatus
ENSODEG00000004873	RBM47	100	89.430	ENSGAGG00000020051	RBM47	100	89.262	Gopherus_agassizii
ENSODEG00000004873	RBM47	100	95.601	ENSGGOG00000001367	RBM47	100	96.800	Gorilla_gorilla
ENSODEG00000004873	RBM47	100	76.634	ENSHBUG00000003520	rbm47	94	84.789	Haplochromis_burtoni
ENSODEG00000004873	RBM47	84	92.742	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSODEG00000004873	RBM47	100	95.770	ENSHGLG00100014028	-	100	96.599	Heterocephalus_glaber_male
ENSODEG00000004873	RBM47	100	85.618	ENSHGLG00100003071	-	100	85.448	Heterocephalus_glaber_male
ENSODEG00000004873	RBM47	99	77.517	ENSHCOG00000002074	rbm47	93	84.225	Hippocampus_comes
ENSODEG00000004873	RBM47	100	76.807	ENSIPUG00000004743	rbm47	100	75.630	Ictalurus_punctatus
ENSODEG00000004873	RBM47	100	95.966	ENSSTOG00000004727	RBM47	100	96.533	Ictidomys_tridecemlineatus
ENSODEG00000004873	RBM47	100	92.797	ENSJJAG00000013823	Rbm47	100	92.797	Jaculus_jaculus
ENSODEG00000004873	RBM47	100	78.094	ENSKMAG00000000084	rbm47	100	76.549	Kryptolebias_marmoratus
ENSODEG00000004873	RBM47	100	76.471	ENSLBEG00000008436	rbm47	100	75.294	Labrus_bergylta
ENSODEG00000004873	RBM47	100	84.007	ENSLACG00000007196	RBM47	100	83.670	Latimeria_chalumnae
ENSODEG00000004873	RBM47	100	80.976	ENSLOCG00000012966	rbm47	95	79.966	Lepisosteus_oculatus
ENSODEG00000004873	RBM47	100	94.622	ENSLAFG00000011998	RBM47	100	92.941	Loxodonta_africana
ENSODEG00000004873	RBM47	100	95.601	ENSMFAG00000037967	RBM47	100	96.800	Macaca_fascicularis
ENSODEG00000004873	RBM47	100	94.790	ENSMMUG00000012036	RBM47	100	95.855	Macaca_mulatta
ENSODEG00000004873	RBM47	100	94.924	ENSMNEG00000040774	RBM47	100	96.533	Macaca_nemestrina
ENSODEG00000004873	RBM47	100	97.143	ENSMLEG00000041432	RBM47	100	97.143	Mandrillus_leucophaeus
ENSODEG00000004873	RBM47	100	76.480	ENSMAMG00000019143	rbm47	94	81.067	Mastacembelus_armatus
ENSODEG00000004873	RBM47	100	76.885	ENSMZEG00005023659	rbm47	95	77.855	Maylandia_zebra
ENSODEG00000004873	RBM47	100	88.462	ENSMGAG00000012226	RBM47	100	88.294	Meleagris_gallopavo
ENSODEG00000004873	RBM47	100	91.779	ENSMAUG00000006493	Rbm47	100	93.103	Mesocricetus_auratus
ENSODEG00000004873	RBM47	100	89.340	ENSMICG00000026417	RBM47	100	90.667	Microcebus_murinus
ENSODEG00000004873	RBM47	100	92.605	ENSMOCG00000021170	Rbm47	100	94.415	Microtus_ochrogaster
ENSODEG00000004873	RBM47	100	76.519	ENSMMOG00000007260	rbm47	95	77.257	Mola_mola
ENSODEG00000004873	RBM47	100	81.387	ENSMODG00000020561	-	100	79.865	Monodelphis_domestica
ENSODEG00000004873	RBM47	52	82.372	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSODEG00000004873	RBM47	100	89.882	ENSMODG00000007003	RBM47	100	89.545	Monodelphis_domestica
ENSODEG00000004873	RBM47	100	81.234	ENSMALG00000005167	rbm47	94	84.507	Monopterus_albus
ENSODEG00000004873	RBM47	100	92.088	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.351	Mus_caroli
ENSODEG00000004873	RBM47	100	92.424	ENSMUSG00000070780	Rbm47	100	93.617	Mus_musculus
ENSODEG00000004873	RBM47	100	92.424	MGP_PahariEiJ_G0017040	Rbm47	100	93.617	Mus_pahari
ENSODEG00000004873	RBM47	100	92.399	MGP_SPRETEiJ_G0028253	Rbm47	100	93.617	Mus_spretus
ENSODEG00000004873	RBM47	100	94.949	ENSMPUG00000006177	RBM47	94	94.781	Mustela_putorius_furo
ENSODEG00000004873	RBM47	100	92.243	ENSMLUG00000000889	RBM47	100	90.894	Myotis_lucifugus
ENSODEG00000004873	RBM47	100	92.282	ENSNGAG00000003325	Rbm47	100	92.114	Nannospalax_galili
ENSODEG00000004873	RBM47	100	76.759	ENSNBRG00000015092	rbm47	95	77.893	Neolamprologus_brichardi
ENSODEG00000004873	RBM47	100	94.755	ENSNLEG00000017151	RBM47	100	96.800	Nomascus_leucogenys
ENSODEG00000004873	RBM47	73	86.247	ENSMEUG00000009516	-	99	87.028	Notamacropus_eugenii
ENSODEG00000004873	RBM47	75	97.095	ENSOPRG00000016507	-	75	97.095	Ochotona_princeps
ENSODEG00000004873	RBM47	100	75.738	ENSONIG00000009061	rbm47	94	77.391	Oreochromis_niloticus
ENSODEG00000004873	RBM47	100	86.455	ENSOANG00000008978	RBM47	100	86.789	Ornithorhynchus_anatinus
ENSODEG00000004873	RBM47	100	96.284	ENSOCUG00000012034	RBM47	100	96.284	Oryctolagus_cuniculus
ENSODEG00000004873	RBM47	100	77.685	ENSORLG00000005847	rbm47	94	83.662	Oryzias_latipes
ENSODEG00000004873	RBM47	100	77.852	ENSORLG00020005154	rbm47	94	83.662	Oryzias_latipes_hni
ENSODEG00000004873	RBM47	100	78.188	ENSORLG00015000066	rbm47	94	83.944	Oryzias_latipes_hsok
ENSODEG00000004873	RBM47	100	78.319	ENSOMEG00000010730	rbm47	100	76.134	Oryzias_melastigma
ENSODEG00000004873	RBM47	100	86.125	ENSOGAG00000025193	-	100	86.125	Otolemur_garnettii
ENSODEG00000004873	RBM47	100	94.781	ENSOGAG00000029367	-	100	94.613	Otolemur_garnettii
ENSODEG00000004873	RBM47	100	88.176	ENSOARG00000012711	RBM47	100	88.176	Ovis_aries
ENSODEG00000004873	RBM47	100	94.924	ENSPPAG00000029763	RBM47	100	94.416	Pan_paniscus
ENSODEG00000004873	RBM47	100	93.909	ENSPPRG00000012873	RBM47	100	97.067	Panthera_pardus
ENSODEG00000004873	RBM47	85	93.227	ENSPTIG00000017046	RBM47	100	93.227	Panthera_tigris_altaica
ENSODEG00000004873	RBM47	100	95.601	ENSPTRG00000016006	RBM47	100	96.800	Pan_troglodytes
ENSODEG00000004873	RBM47	100	95.601	ENSPANG00000005980	RBM47	100	96.800	Papio_anubis
ENSODEG00000004873	RBM47	96	75.000	ENSPKIG00000013431	RBM47	92	85.311	Paramormyrops_kingsleyae
ENSODEG00000004873	RBM47	96	77.138	ENSPKIG00000005037	rbm47	100	73.754	Paramormyrops_kingsleyae
ENSODEG00000004873	RBM47	89	90.530	ENSPSIG00000017516	RBM47	97	90.341	Pelodiscus_sinensis
ENSODEG00000004873	RBM47	100	76.471	ENSPMGG00000018540	rbm47	100	74.790	Periophthalmus_magnuspinnatus
ENSODEG00000004873	RBM47	100	92.617	ENSPEMG00000011088	Rbm47	100	94.415	Peromyscus_maniculatus_bairdii
ENSODEG00000004873	RBM47	100	75.244	ENSPFOG00000007997	rbm47	94	76.603	Poecilia_formosa
ENSODEG00000004873	RBM47	100	82.133	ENSPLAG00000002072	rbm47	100	79.467	Poecilia_latipinna
ENSODEG00000004873	RBM47	100	76.923	ENSPMEG00000017492	rbm47	93	83.051	Poecilia_mexicana
ENSODEG00000004873	RBM47	100	82.400	ENSPREG00000008456	rbm47	100	79.733	Poecilia_reticulata
ENSODEG00000004873	RBM47	98	81.387	ENSPPYG00000014688	RBM47	98	81.271	Pongo_abelii
ENSODEG00000004873	RBM47	81	95.750	ENSPCAG00000011879	RBM47	81	95.750	Procavia_capensis
ENSODEG00000004873	RBM47	100	92.047	ENSPCOG00000023451	RBM47	100	93.333	Propithecus_coquereli
ENSODEG00000004873	RBM47	100	92.773	ENSPVAG00000003812	RBM47	100	93.109	Pteropus_vampyrus
ENSODEG00000004873	RBM47	100	76.346	ENSPNYG00000022868	rbm47	95	77.453	Pundamilia_nyererei
ENSODEG00000004873	RBM47	100	75.410	ENSPNAG00000007940	rbm47	95	76.817	Pygocentrus_nattereri
ENSODEG00000004873	RBM47	100	92.593	ENSRNOG00000002408	Rbm47	100	92.256	Rattus_norvegicus
ENSODEG00000004873	RBM47	100	94.924	ENSRBIG00000039601	RBM47	100	96.533	Rhinopithecus_bieti
ENSODEG00000004873	RBM47	100	94.924	ENSRROG00000044696	RBM47	100	96.533	Rhinopithecus_roxellana
ENSODEG00000004873	RBM47	100	91.032	ENSSBOG00000028475	RBM47	100	95.455	Saimiri_boliviensis_boliviensis
ENSODEG00000004873	RBM47	100	91.371	ENSSHAG00000017576	RBM47	100	91.032	Sarcophilus_harrisii
ENSODEG00000004873	RBM47	100	74.874	ENSSFOG00015024101	RBM47	100	73.367	Scleropages_formosus
ENSODEG00000004873	RBM47	100	72.893	ENSSFOG00015012445	rbm47	100	71.689	Scleropages_formosus
ENSODEG00000004873	RBM47	100	75.369	ENSSMAG00000009744	rbm47	94	82.535	Scophthalmus_maximus
ENSODEG00000004873	RBM47	100	78.151	ENSSDUG00000022684	rbm47	100	76.639	Seriola_dumerili
ENSODEG00000004873	RBM47	100	78.319	ENSSLDG00000003109	rbm47	100	76.639	Seriola_lalandi_dorsalis
ENSODEG00000004873	RBM47	85	93.973	ENSSARG00000001735	RBM47	84	94.196	Sorex_araneus
ENSODEG00000004873	RBM47	100	86.700	ENSSPUG00000007515	RBM47	100	89.333	Sphenodon_punctatus
ENSODEG00000004873	RBM47	100	78.655	ENSSPAG00000001257	rbm47	93	85.070	Stegastes_partitus
ENSODEG00000004873	RBM47	100	96.453	ENSSSCG00000008796	RBM47	100	96.453	Sus_scrofa
ENSODEG00000004873	RBM47	100	88.739	ENSTGUG00000008705	RBM47	100	88.235	Taeniopygia_guttata
ENSODEG00000004873	RBM47	98	76.451	ENSTRUG00000014050	rbm47	100	74.286	Takifugu_rubripes
ENSODEG00000004873	RBM47	100	76.190	ENSTNIG00000006127	rbm47	95	77.217	Tetraodon_nigroviridis
ENSODEG00000004873	RBM47	77	90.933	ENSTBEG00000001607	RBM47	76	90.933	Tupaia_belangeri
ENSODEG00000004873	RBM47	100	95.777	ENSTTRG00000002839	RBM47	100	95.777	Tursiops_truncatus
ENSODEG00000004873	RBM47	100	96.128	ENSUAMG00000021346	RBM47	100	96.128	Ursus_americanus
ENSODEG00000004873	RBM47	57	96.296	ENSVPAG00000000641	-	57	96.296	Vicugna_pacos
ENSODEG00000004873	RBM47	96	94.903	ENSVVUG00000014774	RBM47	100	93.423	Vulpes_vulpes
ENSODEG00000004873	RBM47	100	85.354	ENSXETG00000012802	rbm47	100	84.007	Xenopus_tropicalis
ENSODEG00000004873	RBM47	88	81.867	ENSXCOG00000000780	rbm47	100	79.467	Xiphophorus_couchianus
ENSODEG00000004873	RBM47	100	75.966	ENSXMAG00000009874	rbm47	93	82.768	Xiphophorus_maculatus