EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004897 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1038 bases
Position: chrJH651586.1:7788795-7789832
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006555	RRM_1	PF00076.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006659	-	1014	-	ENSODEP00000006555	337 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004897	-	77	35.145	ENSODEG00000007170	-	67	34.286
ENSODEG00000004897	-	100	85.042	ENSODEG00000001826	-	77	85.042
ENSODEG00000004897	-	92	34.530	ENSODEG00000002359	-	88	34.530
ENSODEG00000004897	-	92	41.558	ENSODEG00000019266	-	87	41.558
ENSODEG00000004897	-	92	37.330	ENSODEG00000001195	-	80	37.190
ENSODEG00000004897	-	94	75.964	ENSODEG00000010775	-	100	75.964
ENSODEG00000004897	-	92	36.538	ENSODEG00000007058	-	85	34.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004897	-	100	77.008	ENSG00000132463	GRSF1	100	75.786	Homo_sapiens
ENSODEG00000004897	-	100	76.731	ENSAMEG00000005896	GRSF1	99	76.731	Ailuropoda_melanoleuca
ENSODEG00000004897	-	99	58.659	ENSACAG00000012921	GRSF1	73	58.659	Anolis_carolinensis
ENSODEG00000004897	-	100	78.116	ENSANAG00000022114	GRSF1	84	87.594	Aotus_nancymaae
ENSODEG00000004897	-	100	77.562	ENSBTAG00000008577	GRSF1	99	77.562	Bos_taurus
ENSODEG00000004897	-	100	78.393	ENSCJAG00000014477	GRSF1	86	87.594	Callithrix_jacchus
ENSODEG00000004897	-	79	86.842	ENSCAFG00000002922	GRSF1	95	86.842	Canis_familiaris
ENSODEG00000004897	-	100	77.285	ENSCAFG00020027060	GRSF1	87	77.285	Canis_lupus_dingo
ENSODEG00000004897	-	100	77.285	ENSCHIG00000021580	GRSF1	75	77.285	Capra_hircus
ENSODEG00000004897	-	100	78.393	ENSTSYG00000008487	-	100	76.415	Carlito_syrichta
ENSODEG00000004897	-	99	62.222	ENSTSYG00000028860	-	99	62.222	Carlito_syrichta
ENSODEG00000004897	-	79	88.346	ENSCAPG00000000156	GRSF1	86	88.346	Cavia_aperea
ENSODEG00000004897	-	100	78.670	ENSCPOG00000011662	GRSF1	100	78.670	Cavia_porcellus
ENSODEG00000004897	-	77	77.992	ENSCCAG00000024189	-	82	77.992	Cebus_capucinus
ENSODEG00000004897	-	100	77.285	ENSCCAG00000028735	-	75	77.285	Cebus_capucinus
ENSODEG00000004897	-	100	77.839	ENSCATG00000035808	GRSF1	85	87.218	Cercocebus_atys
ENSODEG00000004897	-	100	80.886	ENSCLAG00000003057	GRSF1	100	80.886	Chinchilla_lanigera
ENSODEG00000004897	-	100	77.839	ENSCSAG00000004856	GRSF1	75	77.839	Chlorocebus_sabaeus
ENSODEG00000004897	-	100	58.516	ENSCPBG00000019502	GRSF1	68	58.516	Chrysemys_picta_bellii
ENSODEG00000004897	-	79	87.218	ENSCANG00000037992	GRSF1	100	76.415	Colobus_angolensis_palliatus
ENSODEG00000004897	-	100	76.454	ENSCGRG00001019953	Grsf1	99	76.454	Cricetulus_griseus_chok1gshd
ENSODEG00000004897	-	100	76.454	ENSCGRG00000005357	Grsf1	100	76.454	Cricetulus_griseus_crigri
ENSODEG00000004897	-	100	78.393	ENSDORG00000015145	Grsf1	89	94.262	Dipodomys_ordii
ENSODEG00000004897	-	95	75.872	ENSETEG00000013786	GRSF1	100	75.872	Echinops_telfairi
ENSODEG00000004897	-	100	77.008	ENSEASG00005016685	GRSF1	71	77.008	Equus_asinus_asinus
ENSODEG00000004897	-	100	76.731	ENSECAG00000024208	GRSF1	71	76.731	Equus_caballus
ENSODEG00000004897	-	99	42.262	ENSELUG00000011613	-	89	42.262	Esox_lucius
ENSODEG00000004897	-	100	76.731	ENSFCAG00000007270	GRSF1	75	76.731	Felis_catus
ENSODEG00000004897	-	93	42.899	ENSFALG00000008394	GRSF1	98	42.899	Ficedula_albicollis
ENSODEG00000004897	-	59	90.164	ENSFDAG00000008167	-	89	90.164	Fukomys_damarensis
ENSODEG00000004897	-	96	41.243	ENSGALG00000031160	GRSF1	73	41.854	Gallus_gallus
ENSODEG00000004897	-	100	58.516	ENSGAGG00000006013	GRSF1	78	58.516	Gopherus_agassizii
ENSODEG00000004897	-	87	75.472	ENSGGOG00000014852	-	100	75.472	Gorilla_gorilla
ENSODEG00000004897	-	100	77.285	ENSHGLG00000000661	GRSF1	100	77.285	Heterocephalus_glaber_female
ENSODEG00000004897	-	100	77.285	ENSHGLG00100005974	GRSF1	97	87.218	Heterocephalus_glaber_male
ENSODEG00000004897	-	100	77.839	ENSSTOG00000011569	GRSF1	99	77.839	Ictidomys_tridecemlineatus
ENSODEG00000004897	-	98	73.333	ENSJJAG00000005325	Grsf1	89	89.344	Jaculus_jaculus
ENSODEG00000004897	-	98	44.633	ENSLACG00000009507	GRSF1	97	44.633	Latimeria_chalumnae
ENSODEG00000004897	-	96	39.886	ENSLOCG00000011589	GRSF1	77	39.886	Lepisosteus_oculatus
ENSODEG00000004897	-	100	77.624	ENSLAFG00000017032	-	100	65.746	Loxodonta_africana
ENSODEG00000004897	-	100	77.562	ENSMFAG00000037346	GRSF1	85	86.842	Macaca_fascicularis
ENSODEG00000004897	-	100	77.562	ENSMMUG00000000380	GRSF1	85	86.842	Macaca_mulatta
ENSODEG00000004897	-	100	79.429	ENSMNEG00000023162	GRSF1	92	83.273	Macaca_nemestrina
ENSODEG00000004897	-	100	77.839	ENSMLEG00000007180	GRSF1	99	77.839	Mandrillus_leucophaeus
ENSODEG00000004897	-	93	41.543	ENSMGAG00000009940	GRSF1	98	41.543	Meleagris_gallopavo
ENSODEG00000004897	-	100	77.008	ENSMICG00000005385	GRSF1	99	77.008	Microcebus_murinus
ENSODEG00000004897	-	57	92.623	ENSMOCG00000012769	-	89	92.623	Microtus_ochrogaster
ENSODEG00000004897	-	100	68.508	ENSMODG00000019088	GRSF1	68	68.508	Monodelphis_domestica
ENSODEG00000004897	-	100	76.731	MGP_CAROLIEiJ_G0027377	Grsf1	89	91.803	Mus_caroli
ENSODEG00000004897	-	100	76.731	ENSMUSG00000044221	Grsf1	89	91.803	Mus_musculus
ENSODEG00000004897	-	100	75.069	MGP_PahariEiJ_G0017155	Grsf1	89	90.984	Mus_pahari
ENSODEG00000004897	-	100	76.731	MGP_SPRETEiJ_G0028374	Grsf1	99	76.731	Mus_spretus
ENSODEG00000004897	-	100	77.562	ENSMPUG00000009499	GRSF1	96	77.562	Mustela_putorius_furo
ENSODEG00000004897	-	100	75.000	ENSMLUG00000028158	GRSF1	99	75.000	Myotis_lucifugus
ENSODEG00000004897	-	57	91.803	ENSNGAG00000022132	-	89	91.803	Nannospalax_galili
ENSODEG00000004897	-	79	85.338	ENSNLEG00000007721	-	85	85.338	Nomascus_leucogenys
ENSODEG00000004897	-	99	67.318	ENSMEUG00000015942	GRSF1	99	67.318	Notamacropus_eugenii
ENSODEG00000004897	-	98	71.000	ENSOPRG00000010148	-	78	71.000	Ochotona_princeps
ENSODEG00000004897	-	73	60.163	ENSOANG00000013696	-	100	60.163	Ornithorhynchus_anatinus
ENSODEG00000004897	-	100	77.562	ENSOCUG00000010029	GRSF1	77	77.562	Oryctolagus_cuniculus
ENSODEG00000004897	-	100	65.651	ENSOGAG00000026370	-	80	65.651	Otolemur_garnettii
ENSODEG00000004897	-	100	76.374	ENSOGAG00000000141	-	99	76.374	Otolemur_garnettii
ENSODEG00000004897	-	100	77.198	ENSOARG00000011898	GRSF1	99	77.198	Ovis_aries
ENSODEG00000004897	-	79	86.466	ENSPPAG00000042456	-	100	75.786	Pan_paniscus
ENSODEG00000004897	-	100	76.731	ENSPPRG00000022913	GRSF1	75	76.731	Panthera_pardus
ENSODEG00000004897	-	100	77.008	ENSPTIG00000008060	GRSF1	99	77.008	Panthera_tigris_altaica
ENSODEG00000004897	-	100	76.454	ENSPTRG00000016136	GRSF1	85	86.090	Pan_troglodytes
ENSODEG00000004897	-	100	77.008	ENSPANG00000018597	GRSF1	85	86.090	Papio_anubis
ENSODEG00000004897	-	97	56.500	ENSPSIG00000014267	-	94	56.500	Pelodiscus_sinensis
ENSODEG00000004897	-	100	77.285	ENSPEMG00000012814	Grsf1	99	77.285	Peromyscus_maniculatus_bairdii
ENSODEG00000004897	-	100	68.698	ENSPCIG00000000627	GRSF1	76	68.698	Phascolarctos_cinereus
ENSODEG00000004897	-	100	60.773	ENSPPYG00000014812	GRSF1	71	57.618	Pongo_abelii
ENSODEG00000004897	-	100	77.285	ENSPCAG00000013949	GRSF1	82	77.285	Procavia_capensis
ENSODEG00000004897	-	100	76.731	ENSPVAG00000004338	GRSF1	81	76.731	Pteropus_vampyrus
ENSODEG00000004897	-	100	76.454	ENSRNOG00000003392	Grsf1	95	76.454	Rattus_norvegicus
ENSODEG00000004897	-	100	77.839	ENSRBIG00000036494	GRSF1	85	87.218	Rhinopithecus_bieti
ENSODEG00000004897	-	100	77.562	ENSRROG00000035735	GRSF1	85	86.842	Rhinopithecus_roxellana
ENSODEG00000004897	-	91	67.532	ENSSBOG00000032141	GRSF1	100	67.532	Saimiri_boliviensis_boliviensis
ENSODEG00000004897	-	99	71.508	ENSSHAG00000018365	GRSF1	93	71.508	Sarcophilus_harrisii
ENSODEG00000004897	-	79	86.090	ENSSARG00000011681	GRSF1	87	86.090	Sorex_araneus
ENSODEG00000004897	-	98	49.280	ENSSPUG00000007576	GRSF1	77	49.857	Sphenodon_punctatus
ENSODEG00000004897	-	100	75.900	ENSSSCG00000008940	GRSF1	75	75.900	Sus_scrofa
ENSODEG00000004897	-	94	44.092	ENSTGUG00000001644	GRSF1	99	44.092	Taeniopygia_guttata
ENSODEG00000004897	-	79	87.218	ENSTBEG00000010173	GRSF1	86	87.218	Tupaia_belangeri
ENSODEG00000004897	-	100	71.468	ENSTTRG00000008405	GRSF1	92	71.468	Tursiops_truncatus
ENSODEG00000004897	-	98	76.062	ENSUAMG00000008901	GRSF1	93	76.062	Ursus_americanus
ENSODEG00000004897	-	100	77.562	ENSUMAG00000003757	GRSF1	87	77.562	Ursus_maritimus
ENSODEG00000004897	-	100	65.651	ENSVPAG00000011889	GRSF1	100	65.651	Vicugna_pacos
ENSODEG00000004897	-	95	76.744	ENSVVUG00000004150	GRSF1	100	76.744	Vulpes_vulpes
ENSODEG00000004897	-	99	43.597	ENSXETG00000013850	grsf1	100	43.059	Xenopus_tropicalis