EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004900 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein R-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1883 bases
Position: chrJH651651.1:792407-794289
Accession: 101572729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006558	RRM_1	PF00076.22	3.3e-34	1	2
ENSODEP00000006558	RRM_1	PF00076.22	3.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006662	-	1644	-	ENSODEP00000006558	547 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004900	-	86	57.738	ENSODEG00000005445	-	90	58.964
ENSODEG00000004900	-	66	48.312	ENSODEG00000004873	RBM47	52	52.077
ENSODEG00000004900	-	50	51.186	ENSODEG00000018002	-	57	51.864
ENSODEG00000004900	-	82	81.461	ENSODEG00000008768	SYNCRIP	89	66.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004900	-	83	61.878	ENSCHIG00000025862	-	76	78.125	Capra_hircus
ENSODEG00000004900	-	63	57.373	FBgn0038826	Syp	70	57.373	Drosophila_melanogaster
ENSODEG00000004900	-	70	79.570	ENSGMOG00000002822	-	71	79.570	Gadus_morhua
ENSODEG00000004900	-	86	60.041	ENSGGOG00000036671	-	96	57.551	Gorilla_gorilla
ENSODEG00000004900	-	64	76.819	ENSMAMG00000004406	-	91	62.281	Mastacembelus_armatus
ENSODEG00000004900	-	86	55.081	ENSPTRG00000043439	-	99	52.632	Pan_troglodytes
ENSODEG00000004900	-	99	67.430	ENSPCOG00000014665	-	96	67.430	Propithecus_coquereli
ENSODEG00000004900	-	64	55.087	ENSTGUG00000012478	-	81	57.072	Taeniopygia_guttata
ENSODEG00000004900	-	99	74.756	ENSTBEG00000002251	-	97	74.756	Tupaia_belangeri
ENSODEG00000004900	-	88	79.747	ENSTTRG00000007752	-	83	79.747	Tursiops_truncatus
ENSODEG00000004900	-	78	82.432	ENSTTRG00000004471	-	77	82.432	Tursiops_truncatus
ENSODEG00000004900	-	71	91.429	ENSVPAG00000006411	-	70	91.429	Vicugna_pacos