EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000004901 (Gene tree)
Gene ID: 101569727
Gene Symbol: PPARGC1B
Alias: PERC|PGC1B
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 104711 bases
Position: chrJH651555.1:5046939-5151649
Accession: 101569727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006559	RRM_1	PF00076.22	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006663	PPARGC1B-201	2943	XM_004631289	ENSODEP00000006559	980 (aa)	XP_004631346	-

Gene Model

Click here to download ENSODEG00000004901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004901	PPARGC1B	100	80.303	ENSG00000155846	PPARGC1B	100	80.000	Homo_sapiens
ENSODEG00000004901	PPARGC1B	100	75.822	ENSAMEG00000005287	PPARGC1B	100	76.306	Ailuropoda_melanoleuca
ENSODEG00000004901	PPARGC1B	99	45.180	ENSAPLG00000009977	PPARGC1B	99	45.969	Anas_platyrhynchos
ENSODEG00000004901	PPARGC1B	100	44.333	ENSACAG00000015737	PPARGC1B	55	50.000	Anolis_carolinensis
ENSODEG00000004901	PPARGC1B	100	80.182	ENSANAG00000021830	PPARGC1B	100	80.283	Aotus_nancymaae
ENSODEG00000004901	PPARGC1B	100	73.816	ENSBTAG00000012943	PPARGC1B	100	73.623	Bos_taurus
ENSODEG00000004901	PPARGC1B	100	80.789	ENSCJAG00000021113	PPARGC1B	99	76.977	Callithrix_jacchus
ENSODEG00000004901	PPARGC1B	100	75.532	ENSCAFG00000018275	PPARGC1B	100	76.112	Canis_familiaris
ENSODEG00000004901	PPARGC1B	100	78.995	ENSCAFG00020023524	PPARGC1B	100	79.095	Canis_lupus_dingo
ENSODEG00000004901	PPARGC1B	100	73.623	ENSCHIG00000004409	PPARGC1B	100	73.623	Capra_hircus
ENSODEG00000004901	PPARGC1B	97	70.674	ENSTSYG00000034354	PPARGC1B	100	70.570	Carlito_syrichta
ENSODEG00000004901	PPARGC1B	97	86.430	ENSCAPG00000008859	PPARGC1B	99	86.534	Cavia_aperea
ENSODEG00000004901	PPARGC1B	100	82.993	ENSCPOG00000001958	PPARGC1B	100	83.090	Cavia_porcellus
ENSODEG00000004901	PPARGC1B	100	80.243	ENSCCAG00000026909	PPARGC1B	100	80.142	Cebus_capucinus
ENSODEG00000004901	PPARGC1B	100	80.202	ENSCATG00000030402	PPARGC1B	100	80.101	Cercocebus_atys
ENSODEG00000004901	PPARGC1B	100	87.286	ENSCLAG00000015452	PPARGC1B	100	87.386	Chinchilla_lanigera
ENSODEG00000004901	PPARGC1B	97	76.570	ENSCSAG00000011792	PPARGC1B	100	76.471	Chlorocebus_sabaeus
ENSODEG00000004901	PPARGC1B	62	84.524	ENSCHOG00000005517	-	65	84.524	Choloepus_hoffmanni
ENSODEG00000004901	PPARGC1B	99	47.560	ENSCPBG00000007891	PPARGC1B	99	45.829	Chrysemys_picta_bellii
ENSODEG00000004901	PPARGC1B	100	79.536	ENSCANG00000037487	PPARGC1B	100	79.435	Colobus_angolensis_palliatus
ENSODEG00000004901	PPARGC1B	97	72.700	ENSCGRG00001017949	Ppargc1b	96	73.000	Cricetulus_griseus_chok1gshd
ENSODEG00000004901	PPARGC1B	98	72.355	ENSCGRG00000008387	Ppargc1b	99	72.455	Cricetulus_griseus_crigri
ENSODEG00000004901	PPARGC1B	80	39.231	ENSDARG00000101569	ppargc1b	70	39.231	Danio_rerio
ENSODEG00000004901	PPARGC1B	92	79.012	ENSDNOG00000005985	PPARGC1B	99	78.395	Dasypus_novemcinctus
ENSODEG00000004901	PPARGC1B	100	75.733	ENSDORG00000012605	Ppargc1b	100	77.048	Dipodomys_ordii
ENSODEG00000004901	PPARGC1B	100	78.536	ENSEASG00005002826	PPARGC1B	100	77.834	Equus_asinus_asinus
ENSODEG00000004901	PPARGC1B	100	77.912	ENSECAG00000019769	PPARGC1B	82	77.912	Equus_caballus
ENSODEG00000004901	PPARGC1B	78	72.687	ENSEEUG00000014903	PPARGC1B	86	73.568	Erinaceus_europaeus
ENSODEG00000004901	PPARGC1B	57	53.279	ENSELUG00000014929	ppargc1b	61	38.843	Esox_lucius
ENSODEG00000004901	PPARGC1B	97	45.809	ENSFALG00000008858	PPARGC1B	99	45.854	Ficedula_albicollis
ENSODEG00000004901	PPARGC1B	97	78.365	ENSFDAG00000008719	PPARGC1B	99	78.963	Fukomys_damarensis
ENSODEG00000004901	PPARGC1B	99	44.233	ENSGAGG00000012870	PPARGC1B	99	44.859	Gopherus_agassizii
ENSODEG00000004901	PPARGC1B	99	77.665	ENSGGOG00000009505	PPARGC1B	99	79.149	Gorilla_gorilla
ENSODEG00000004901	PPARGC1B	97	95.200	ENSHGLG00000005967	PPARGC1B	100	80.291	Heterocephalus_glaber_female
ENSODEG00000004901	PPARGC1B	100	82.508	ENSHGLG00100010588	PPARGC1B	100	82.406	Heterocephalus_glaber_male
ENSODEG00000004901	PPARGC1B	54	54.167	ENSIPUG00000001584	Ppargc1b	70	54.098	Ictalurus_punctatus
ENSODEG00000004901	PPARGC1B	100	78.185	ENSSTOG00000024758	PPARGC1B	100	78.571	Ictidomys_tridecemlineatus
ENSODEG00000004901	PPARGC1B	100	71.777	ENSJJAG00000018633	Ppargc1b	100	71.236	Jaculus_jaculus
ENSODEG00000004901	PPARGC1B	97	34.708	ENSLACG00000011232	PPARGC1B	83	34.629	Latimeria_chalumnae
ENSODEG00000004901	PPARGC1B	97	71.301	ENSLAFG00000012339	PPARGC1B	99	72.471	Loxodonta_africana
ENSODEG00000004901	PPARGC1B	100	80.202	ENSMFAG00000042269	PPARGC1B	100	80.101	Macaca_fascicularis
ENSODEG00000004901	PPARGC1B	100	80.202	ENSMMUG00000004749	PPARGC1B	100	80.101	Macaca_mulatta
ENSODEG00000004901	PPARGC1B	100	80.202	ENSMNEG00000034121	PPARGC1B	100	80.101	Macaca_nemestrina
ENSODEG00000004901	PPARGC1B	97	76.770	ENSMLEG00000040973	PPARGC1B	100	76.670	Mandrillus_leucophaeus
ENSODEG00000004901	PPARGC1B	82	66.667	ENSMGAG00000003134	PPARGC1B	100	42.105	Meleagris_gallopavo
ENSODEG00000004901	PPARGC1B	100	72.082	ENSMAUG00000014191	Ppargc1b	100	71.790	Mesocricetus_auratus
ENSODEG00000004901	PPARGC1B	100	79.167	ENSMICG00000002702	PPARGC1B	100	78.659	Microcebus_murinus
ENSODEG00000004901	PPARGC1B	100	73.659	ENSMOCG00000014885	Ppargc1b	100	73.951	Microtus_ochrogaster
ENSODEG00000004901	PPARGC1B	98	52.874	ENSMODG00000009891	PPARGC1B	99	53.181	Monodelphis_domestica
ENSODEG00000004901	PPARGC1B	100	73.140	MGP_CAROLIEiJ_G0022323	Ppargc1b	100	73.237	Mus_caroli
ENSODEG00000004901	PPARGC1B	100	72.894	ENSMUSG00000033871	Ppargc1b	100	72.991	Mus_musculus
ENSODEG00000004901	PPARGC1B	100	71.167	MGP_PahariEiJ_G0019053	Ppargc1b	100	72.324	Mus_pahari
ENSODEG00000004901	PPARGC1B	100	73.036	MGP_SPRETEiJ_G0023235	Ppargc1b	100	73.521	Mus_spretus
ENSODEG00000004901	PPARGC1B	100	75.629	ENSMPUG00000014245	PPARGC1B	100	76.209	Mustela_putorius_furo
ENSODEG00000004901	PPARGC1B	91	69.561	ENSMLUG00000013169	PPARGC1B	100	69.665	Myotis_lucifugus
ENSODEG00000004901	PPARGC1B	100	73.152	ENSNGAG00000016998	Ppargc1b	99	72.931	Nannospalax_galili
ENSODEG00000004901	PPARGC1B	100	77.778	ENSNLEG00000010193	PPARGC1B	100	77.677	Nomascus_leucogenys
ENSODEG00000004901	PPARGC1B	97	68.900	ENSOPRG00000010017	PPARGC1B	99	68.900	Ochotona_princeps
ENSODEG00000004901	PPARGC1B	88	59.859	ENSOANG00000009368	PPARGC1B	94	59.683	Ornithorhynchus_anatinus
ENSODEG00000004901	PPARGC1B	97	71.316	ENSOCUG00000013833	PPARGC1B	100	71.414	Oryctolagus_cuniculus
ENSODEG00000004901	PPARGC1B	97	71.756	ENSOGAG00000015983	PPARGC1B	99	70.939	Otolemur_garnettii
ENSODEG00000004901	PPARGC1B	98	71.722	ENSOARG00000005658	PPARGC1B	98	71.722	Ovis_aries
ENSODEG00000004901	PPARGC1B	99	78.883	ENSPPAG00000035226	PPARGC1B	99	79.461	Pan_paniscus
ENSODEG00000004901	PPARGC1B	97	80.538	ENSPPRG00000004608	PPARGC1B	99	80.228	Panthera_pardus
ENSODEG00000004901	PPARGC1B	100	79.053	ENSPTIG00000007391	PPARGC1B	100	78.651	Panthera_tigris_altaica
ENSODEG00000004901	PPARGC1B	100	80.101	ENSPTRG00000017403	PPARGC1B	100	80.000	Pan_troglodytes
ENSODEG00000004901	PPARGC1B	100	80.202	ENSPANG00000009512	PPARGC1B	100	80.101	Papio_anubis
ENSODEG00000004901	PPARGC1B	99	46.825	ENSPSIG00000008358	PPARGC1B	99	45.089	Pelodiscus_sinensis
ENSODEG00000004901	PPARGC1B	100	72.913	ENSPEMG00000018822	Ppargc1b	100	73.010	Peromyscus_maniculatus_bairdii
ENSODEG00000004901	PPARGC1B	89	51.309	ENSPCIG00000020102	PPARGC1B	99	51.099	Phascolarctos_cinereus
ENSODEG00000004901	PPARGC1B	100	77.357	ENSPPYG00000015938	PPARGC1B	100	77.259	Pongo_abelii
ENSODEG00000004901	PPARGC1B	70	77.583	ENSPCAG00000012171	PPARGC1B	73	84.615	Procavia_capensis
ENSODEG00000004901	PPARGC1B	100	80.264	ENSPCOG00000024059	PPARGC1B	100	80.163	Propithecus_coquereli
ENSODEG00000004901	PPARGC1B	100	73.858	ENSPVAG00000001308	PPARGC1B	100	74.294	Pteropus_vampyrus
ENSODEG00000004901	PPARGC1B	52	40.807	ENSPNAG00000023871	ppargc1b	80	37.931	Pygocentrus_nattereri
ENSODEG00000004901	PPARGC1B	100	71.845	ENSRNOG00000017503	Ppargc1b	100	72.330	Rattus_norvegicus
ENSODEG00000004901	PPARGC1B	100	79.415	ENSRBIG00000036724	PPARGC1B	100	79.415	Rhinopithecus_bieti
ENSODEG00000004901	PPARGC1B	97	79.062	ENSRROG00000029594	PPARGC1B	97	79.067	Rhinopithecus_roxellana
ENSODEG00000004901	PPARGC1B	100	79.939	ENSSBOG00000028738	PPARGC1B	100	79.838	Saimiri_boliviensis_boliviensis
ENSODEG00000004901	PPARGC1B	99	52.874	ENSSHAG00000016400	PPARGC1B	99	52.969	Sarcophilus_harrisii
ENSODEG00000004901	PPARGC1B	99	43.624	ENSSPUG00000019271	PPARGC1B	99	44.476	Sphenodon_punctatus
ENSODEG00000004901	PPARGC1B	100	69.653	ENSSSCG00000014437	PPARGC1B	100	70.809	Sus_scrofa
ENSODEG00000004901	PPARGC1B	97	45.631	ENSTGUG00000000232	PPARGC1B	100	45.667	Taeniopygia_guttata
ENSODEG00000004901	PPARGC1B	99	74.827	ENSTTRG00000008430	PPARGC1B	100	75.025	Tursiops_truncatus
ENSODEG00000004901	PPARGC1B	99	77.475	ENSUMAG00000005361	PPARGC1B	99	77.778	Ursus_maritimus
ENSODEG00000004901	PPARGC1B	100	75.822	ENSVVUG00000014358	PPARGC1B	100	76.402	Vulpes_vulpes
ENSODEG00000004901	PPARGC1B	87	43.894	ENSXETG00000012711	ppargc1b	97	43.463	Xenopus_tropicalis