EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000004982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1385 bases
Position: chrJH651616.1:9335552-9336936
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006665	RRM_1	PF00076.22	7.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006770	-	1158	-	ENSODEP00000006665	385 (aa)	-	-

Gene Model

Click here to download ENSODEG00000004982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000004982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000004982	-	69	53.220	ENSODEG00000019012	-	54	55.109
ENSODEG00000004982	-	98	54.964	ENSODEG00000011878	-	96	52.941
ENSODEG00000004982	-	86	47.015	ENSODEG00000000530	-	84	45.025
ENSODEG00000004982	-	99	64.027	ENSODEG00000002994	-	96	66.591
ENSODEG00000004982	-	57	53.680	ENSODEG00000007817	-	55	48.070
ENSODEG00000004982	-	99	62.309	ENSODEG00000002224	-	97	61.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000004982	-	99	65.795	ENSG00000147140	NONO	99	70.673	Homo_sapiens
ENSODEG00000004982	-	77	52.266	ENSAPOG00000023320	nono	64	58.781	Acanthochromis_polyacanthus
ENSODEG00000004982	-	99	65.577	ENSAMEG00000016057	NONO	97	68.053	Ailuropoda_melanoleuca
ENSODEG00000004982	-	63	59.854	ENSACIG00000019987	nono	63	60.215	Amphilophus_citrinellus
ENSODEG00000004982	-	77	51.964	ENSAOCG00000018863	nono	64	58.423	Amphiprion_ocellaris
ENSODEG00000004982	-	63	58.029	ENSAPEG00000011383	nono	69	58.423	Amphiprion_percula
ENSODEG00000004982	-	78	67.442	ENSACAG00000015026	NONO	97	57.081	Anolis_carolinensis
ENSODEG00000004982	-	99	52.535	ENSANAG00000035751	-	97	59.355	Aotus_nancymaae
ENSODEG00000004982	-	99	65.795	ENSANAG00000033266	-	97	68.271	Aotus_nancymaae
ENSODEG00000004982	-	98	52.667	ENSANAG00000027089	-	96	55.333	Aotus_nancymaae
ENSODEG00000004982	-	69	57.627	ENSACLG00000012045	nono	74	60.932	Astatotilapia_calliptera
ENSODEG00000004982	-	74	53.116	ENSAMXG00000033933	nono	63	60.573	Astyanax_mexicanus
ENSODEG00000004982	-	99	66.977	ENSBTAG00000012152	NONO	97	67.834	Bos_taurus
ENSODEG00000004982	-	99	68.352	ENSCJAG00000036744	NONO	94	72.848	Callithrix_jacchus
ENSODEG00000004982	-	99	49.415	ENSCAFG00000013766	-	96	52.494	Canis_familiaris
ENSODEG00000004982	-	99	65.359	ENSCAFG00000003207	-	97	67.834	Canis_familiaris
ENSODEG00000004982	-	78	65.294	ENSCAFG00000030809	-	99	60.859	Canis_familiaris
ENSODEG00000004982	-	99	65.577	ENSCAFG00000017071	NONO	97	68.053	Canis_familiaris
ENSODEG00000004982	-	99	66.447	ENSCAFG00020020298	-	97	68.502	Canis_lupus_dingo
ENSODEG00000004982	-	99	68.558	ENSCHIG00000000365	-	97	67.834	Capra_hircus
ENSODEG00000004982	-	99	66.447	ENSTSYG00000007423	-	96	68.282	Carlito_syrichta
ENSODEG00000004982	-	98	64.318	ENSTSYG00000036306	-	96	65.376	Carlito_syrichta
ENSODEG00000004982	-	99	62.870	ENSTSYG00000034207	-	96	62.100	Carlito_syrichta
ENSODEG00000004982	-	99	64.655	ENSCAPG00000011616	-	97	64.719	Cavia_aperea
ENSODEG00000004982	-	99	47.032	ENSCAPG00000002723	-	96	45.622	Cavia_aperea
ENSODEG00000004982	-	98	59.953	ENSCAPG00000002354	-	94	58.294	Cavia_aperea
ENSODEG00000004982	-	73	67.450	ENSCAPG00000006522	-	80	65.033	Cavia_aperea
ENSODEG00000004982	-	84	67.575	ENSCPOG00000036719	-	84	67.630	Cavia_porcellus
ENSODEG00000004982	-	99	62.416	ENSCPOG00000038668	-	97	63.029	Cavia_porcellus
ENSODEG00000004982	-	99	64.316	ENSCPOG00000010263	-	97	66.738	Cavia_porcellus
ENSODEG00000004982	-	99	58.411	ENSCPOG00000026604	-	96	57.143	Cavia_porcellus
ENSODEG00000004982	-	99	64.935	ENSCPOG00000023605	-	97	66.161	Cavia_porcellus
ENSODEG00000004982	-	99	60.177	ENSCATG00000039509	NONO	96	62.667	Cercocebus_atys
ENSODEG00000004982	-	99	66.522	ENSCLAG00000003642	NONO	97	68.996	Chinchilla_lanigera
ENSODEG00000004982	-	78	64.306	ENSCPBG00000016659	NONO	97	57.996	Chrysemys_picta_bellii
ENSODEG00000004982	-	99	69.265	ENSCANG00000025310	NONO	96	69.643	Colobus_angolensis_palliatus
ENSODEG00000004982	-	99	66.161	ENSCGRG00001000065	Nono	97	68.478	Cricetulus_griseus_chok1gshd
ENSODEG00000004982	-	85	66.244	ENSCGRG00000004508	Nono	94	68.957	Cricetulus_griseus_crigri
ENSODEG00000004982	-	63	59.854	ENSCSEG00000010708	nono	61	59.857	Cynoglossus_semilaevis
ENSODEG00000004982	-	63	59.854	ENSCSEG00000008189	NONO	63	60.215	Cynoglossus_semilaevis
ENSODEG00000004982	-	75	54.180	ENSCVAG00000003978	nono	63	60.215	Cyprinodon_variegatus
ENSODEG00000004982	-	70	59.333	ENSDARG00000020482	nono	76	54.545	Danio_rerio
ENSODEG00000004982	-	66	52.862	ENSDNOG00000032215	-	98	53.082	Dasypus_novemcinctus
ENSODEG00000004982	-	99	64.052	ENSDORG00000009294	Nono	97	66.376	Dipodomys_ordii
ENSODEG00000004982	-	73	66.569	ENSETEG00000013823	NONO	73	69.706	Echinops_telfairi
ENSODEG00000004982	-	99	65.577	ENSECAG00000008502	NONO	97	68.053	Equus_caballus
ENSODEG00000004982	-	99	63.991	ENSEEUG00000014404	NONO	97	66.304	Erinaceus_europaeus
ENSODEG00000004982	-	83	51.944	ENSELUG00000001083	nono	63	59.498	Esox_lucius
ENSODEG00000004982	-	99	65.577	ENSFCAG00000043511	-	97	68.053	Felis_catus
ENSODEG00000004982	-	99	56.235	ENSFALG00000011765	NONO	96	55.896	Ficedula_albicollis
ENSODEG00000004982	-	99	65.577	ENSFDAG00000012809	-	97	68.053	Fukomys_damarensis
ENSODEG00000004982	-	99	55.149	ENSFDAG00000006143	-	96	58.257	Fukomys_damarensis
ENSODEG00000004982	-	75	53.251	ENSFHEG00000009714	nono	65	59.140	Fundulus_heteroclitus
ENSODEG00000004982	-	75	54.180	ENSGAFG00000011460	nono	64	60.215	Gambusia_affinis
ENSODEG00000004982	-	77	53.153	ENSGACG00000011824	nono	63	58.423	Gasterosteus_aculeatus
ENSODEG00000004982	-	78	66.570	ENSGAGG00000025400	-	88	59.565	Gopherus_agassizii
ENSODEG00000004982	-	91	64.269	ENSGGOG00000006194	NONO	97	66.744	Gorilla_gorilla
ENSODEG00000004982	-	99	63.279	ENSGGOG00000036327	-	96	62.356	Gorilla_gorilla
ENSODEG00000004982	-	77	53.453	ENSHBUG00000010741	nono	63	60.932	Haplochromis_burtoni
ENSODEG00000004982	-	99	66.667	ENSHGLG00000005550	NONO	97	68.928	Heterocephalus_glaber_female
ENSODEG00000004982	-	99	66.667	ENSHGLG00100013511	NONO	97	68.928	Heterocephalus_glaber_male
ENSODEG00000004982	-	77	53.754	ENSHCOG00000016441	nono	66	60.573	Hippocampus_comes
ENSODEG00000004982	-	89	48.889	ENSIPUG00000018271	nono	66	60.215	Ictalurus_punctatus
ENSODEG00000004982	-	99	65.577	ENSSTOG00000015869	NONO	97	68.053	Ictidomys_tridecemlineatus
ENSODEG00000004982	-	99	64.924	ENSJJAG00000017151	-	97	67.396	Jaculus_jaculus
ENSODEG00000004982	-	99	52.980	ENSJJAG00000001971	-	96	52.242	Jaculus_jaculus
ENSODEG00000004982	-	77	52.096	ENSKMAG00000002798	nono	63	58.423	Kryptolebias_marmoratus
ENSODEG00000004982	-	77	53.776	ENSLBEG00000022623	nono	65	59.857	Labrus_bergylta
ENSODEG00000004982	-	78	58.721	ENSLACG00000000598	NONO	67	65.591	Latimeria_chalumnae
ENSODEG00000004982	-	77	54.303	ENSLOCG00000014739	nono	64	59.932	Lepisosteus_oculatus
ENSODEG00000004982	-	99	66.013	ENSLAFG00000013422	NONO	97	68.271	Loxodonta_africana
ENSODEG00000004982	-	99	69.976	ENSMFAG00000041557	NONO	96	70.142	Macaca_fascicularis
ENSODEG00000004982	-	79	66.301	ENSMMUG00000020481	NONO	95	69.231	Macaca_mulatta
ENSODEG00000004982	-	99	68.352	ENSMNEG00000009698	NONO	97	68.271	Macaca_nemestrina
ENSODEG00000004982	-	99	68.352	ENSMLEG00000042452	NONO	97	68.271	Mandrillus_leucophaeus
ENSODEG00000004982	-	77	52.679	ENSMAMG00000007314	nono	63	59.140	Mastacembelus_armatus
ENSODEG00000004982	-	77	53.453	ENSMZEG00005010199	nono	74	60.932	Maylandia_zebra
ENSODEG00000004982	-	71	72.202	ENSMGAG00000008869	NONO	91	59.542	Meleagris_gallopavo
ENSODEG00000004982	-	99	65.801	ENSMAUG00000016243	Nono	97	67.896	Mesocricetus_auratus
ENSODEG00000004982	-	99	65.055	ENSMICG00000000232	NONO	97	66.958	Microcebus_murinus
ENSODEG00000004982	-	89	63.830	ENSMOCG00000005532	-	93	66.507	Microtus_ochrogaster
ENSODEG00000004982	-	99	58.444	ENSMOCG00000021293	-	97	58.222	Microtus_ochrogaster
ENSODEG00000004982	-	99	58.314	ENSMOCG00000020099	-	92	57.175	Microtus_ochrogaster
ENSODEG00000004982	-	77	53.453	ENSMMOG00000015503	nono	58	59.498	Mola_mola
ENSODEG00000004982	-	89	61.667	ENSMODG00000004445	NONO	96	59.569	Monodelphis_domestica
ENSODEG00000004982	-	75	52.632	ENSMALG00000001310	nono	67	58.065	Monopterus_albus
ENSODEG00000004982	-	78	72.384	ENSMUSG00000031311	Nono	97	68.261	Mus_musculus
ENSODEG00000004982	-	78	71.965	MGP_PahariEiJ_G0031826	Nono	97	67.965	Mus_pahari
ENSODEG00000004982	-	99	65.577	ENSMPUG00000004937	NONO	97	68.053	Mustela_putorius_furo
ENSODEG00000004982	-	99	65.142	ENSMLUG00000002489	NONO	86	67.615	Myotis_lucifugus
ENSODEG00000004982	-	99	63.617	ENSNGAG00000010857	Nono	97	66.302	Nannospalax_galili
ENSODEG00000004982	-	77	53.453	ENSNBRG00000017083	nono	63	60.932	Neolamprologus_brichardi
ENSODEG00000004982	-	99	69.265	ENSNLEG00000001278	NONO	96	69.643	Nomascus_leucogenys
ENSODEG00000004982	-	99	56.371	ENSMEUG00000004294	NONO	97	57.667	Notamacropus_eugenii
ENSODEG00000004982	-	56	69.643	ENSOPRG00000001139	-	64	69.643	Ochotona_princeps
ENSODEG00000004982	-	77	53.453	ENSONIG00000020497	nono	63	60.932	Oreochromis_niloticus
ENSODEG00000004982	-	98	46.682	ENSOCUG00000024801	-	94	45.735	Oryctolagus_cuniculus
ENSODEG00000004982	-	93	61.872	ENSOCUG00000021848	-	82	69.309	Oryctolagus_cuniculus
ENSODEG00000004982	-	74	51.988	ENSORLG00000012801	nono	64	58.781	Oryzias_latipes
ENSODEG00000004982	-	69	55.593	ENSORLG00020003761	nono	64	58.781	Oryzias_latipes_hni
ENSODEG00000004982	-	74	51.988	ENSORLG00015018033	nono	64	58.781	Oryzias_latipes_hsok
ENSODEG00000004982	-	74	52.294	ENSOMEG00000012702	nono	64	59.140	Oryzias_melastigma
ENSODEG00000004982	-	99	65.795	ENSOGAG00000004834	NONO	97	64.192	Otolemur_garnettii
ENSODEG00000004982	-	99	65.359	ENSOARG00000016966	NONO	96	67.615	Ovis_aries
ENSODEG00000004982	-	99	64.155	ENSPPAG00000041394	-	96	65.068	Pan_paniscus
ENSODEG00000004982	-	99	66.960	ENSPPAG00000032487	NONO	96	69.333	Pan_paniscus
ENSODEG00000004982	-	99	65.577	ENSPPRG00000024537	-	97	68.053	Panthera_pardus
ENSODEG00000004982	-	99	65.359	ENSPTIG00000016068	-	97	67.834	Panthera_tigris_altaica
ENSODEG00000004982	-	99	64.155	ENSPTRG00000051228	-	97	65.068	Pan_troglodytes
ENSODEG00000004982	-	99	66.960	ENSPTRG00000022010	NONO	96	69.333	Pan_troglodytes
ENSODEG00000004982	-	99	68.352	ENSPANG00000013979	NONO	97	68.271	Papio_anubis
ENSODEG00000004982	-	99	47.484	ENSPANG00000035017	-	96	46.288	Papio_anubis
ENSODEG00000004982	-	84	51.743	ENSPKIG00000019475	-	91	58.989	Paramormyrops_kingsleyae
ENSODEG00000004982	-	84	53.889	ENSPKIG00000014500	nono	62	60.932	Paramormyrops_kingsleyae
ENSODEG00000004982	-	78	65.988	ENSPSIG00000010678	NONO	99	59.434	Pelodiscus_sinensis
ENSODEG00000004982	-	84	52.066	ENSPMGG00000023030	nono	64	58.781	Periophthalmus_magnuspinnatus
ENSODEG00000004982	-	99	65.944	ENSPEMG00000011150	Nono	97	68.261	Peromyscus_maniculatus_bairdii
ENSODEG00000004982	-	99	64.114	ENSPCIG00000026515	NONO	97	64.333	Phascolarctos_cinereus
ENSODEG00000004982	-	81	51.724	ENSPFOG00000016436	nono	66	58.845	Poecilia_formosa
ENSODEG00000004982	-	75	53.251	ENSPLAG00000017492	nono	63	59.498	Poecilia_latipinna
ENSODEG00000004982	-	71	54.902	ENSPMEG00000021530	nono	64	59.498	Poecilia_mexicana
ENSODEG00000004982	-	77	52.994	ENSPREG00000010014	nono	63	59.498	Poecilia_reticulata
ENSODEG00000004982	-	99	65.577	ENSPPYG00000020451	NONO	97	68.053	Pongo_abelii
ENSODEG00000004982	-	99	65.727	ENSPCAG00000002541	NONO	97	68.192	Procavia_capensis
ENSODEG00000004982	-	99	68.132	ENSPCOG00000008197	NONO	97	68.053	Propithecus_coquereli
ENSODEG00000004982	-	99	65.142	ENSPVAG00000016503	NONO	97	67.396	Pteropus_vampyrus
ENSODEG00000004982	-	77	53.079	ENSPNAG00000008232	nono	56	61.290	Pygocentrus_nattereri
ENSODEG00000004982	-	78	72.046	ENSRNOG00000003689	Nono	97	67.603	Rattus_norvegicus
ENSODEG00000004982	-	76	66.761	ENSRBIG00000037966	NONO	96	69.801	Rhinopithecus_bieti
ENSODEG00000004982	-	99	69.265	ENSRROG00000043203	NONO	96	69.643	Rhinopithecus_roxellana
ENSODEG00000004982	-	99	68.352	ENSSBOG00000032772	-	97	68.271	Saimiri_boliviensis_boliviensis
ENSODEG00000004982	-	98	59.677	ENSSBOG00000018932	-	96	59.677	Saimiri_boliviensis_boliviensis
ENSODEG00000004982	-	99	63.535	ENSSBOG00000027683	-	96	66.067	Saimiri_boliviensis_boliviensis
ENSODEG00000004982	-	99	61.555	ENSSHAG00000010195	NONO	97	62.851	Sarcophilus_harrisii
ENSODEG00000004982	-	75	54.192	ENSSFOG00015000137	-	74	59.140	Scleropages_formosus
ENSODEG00000004982	-	94	46.364	ENSSFOG00015008964	nono	77	62.366	Scleropages_formosus
ENSODEG00000004982	-	68	55.518	ENSSDUG00000021886	nono	63	59.140	Seriola_dumerili
ENSODEG00000004982	-	68	55.518	ENSSLDG00000012392	nono	63	59.140	Seriola_lalandi_dorsalis
ENSODEG00000004982	-	85	87.037	ENSSARG00000007959	NONO	97	60.217	Sorex_araneus
ENSODEG00000004982	-	59	72.800	ENSSPUG00000003116	NONO	96	61.413	Sphenodon_punctatus
ENSODEG00000004982	-	77	52.568	ENSSPAG00000012663	nono	64	59.140	Stegastes_partitus
ENSODEG00000004982	-	99	65.577	ENSSSCG00000023245	NONO	97	68.053	Sus_scrofa
ENSODEG00000004982	-	77	54.054	ENSTRUG00000005554	nono	63	60.573	Takifugu_rubripes
ENSODEG00000004982	-	99	65.577	ENSTTRG00000009605	NONO	97	68.053	Tursiops_truncatus
ENSODEG00000004982	-	99	68.132	ENSUAMG00000008220	NONO	97	68.502	Ursus_americanus
ENSODEG00000004982	-	99	65.577	ENSUMAG00000021550	NONO	97	68.053	Ursus_maritimus
ENSODEG00000004982	-	99	65.577	ENSVPAG00000002272	NONO	97	68.053	Vicugna_pacos
ENSODEG00000004982	-	99	65.577	ENSVVUG00000003390	-	97	67.615	Vulpes_vulpes
ENSODEG00000004982	-	99	50.000	ENSXETG00000020868	nono	96	53.392	Xenopus_tropicalis
ENSODEG00000004982	-	75	53.870	ENSXCOG00000015587	nono	64	59.857	Xiphophorus_couchianus
ENSODEG00000004982	-	75	53.870	ENSXMAG00000019883	nono	64	59.857	Xiphophorus_maculatus