EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1073 bases
Position: chrJH651651.1:6839596-6840668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006736	ROKNT	PF08067.11	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006842	-	249	-	ENSODEP00000006736	82 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005039	-	98	82.500	ENSODEG00000005023	-	88	96.970
ENSODEG00000005039	-	98	86.250	ENSODEG00000005637	HNRNPK	100	86.250
ENSODEG00000005039	-	80	78.788	ENSODEG00000001511	-	57	78.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005039	-	80	69.697	ENSCATG00000040500	-	79	69.697	Cercocebus_atys
ENSODEG00000005039	-	80	75.362	ENSCVAG00000022369	-	62	75.362	Cyprinodon_variegatus
ENSODEG00000005039	-	76	49.231	ENSFCAG00000039466	-	74	49.231	Felis_catus
ENSODEG00000005039	-	100	75.556	ENSJJAG00000007328	-	70	75.556	Jaculus_jaculus
ENSODEG00000005039	-	99	79.012	ENSJJAG00000000157	-	91	79.012	Jaculus_jaculus
ENSODEG00000005039	-	98	83.750	ENSJJAG00000021068	-	100	83.750	Jaculus_jaculus
ENSODEG00000005039	-	80	69.697	ENSMFAG00000002848	-	79	69.697	Macaca_fascicularis
ENSODEG00000005039	-	80	69.697	ENSMLEG00000043587	-	79	69.697	Mandrillus_leucophaeus
ENSODEG00000005039	-	79	79.104	ENSMMOG00000000027	-	84	79.104	Mola_mola
ENSODEG00000005039	-	80	66.667	ENSNLEG00000035266	-	64	66.667	Nomascus_leucogenys
ENSODEG00000005039	-	80	77.273	ENSPCIG00000023538	-	72	77.273	Phascolarctos_cinereus
ENSODEG00000005039	-	98	85.185	ENSPCIG00000022246	-	91	85.185	Phascolarctos_cinereus
ENSODEG00000005039	-	98	68.750	ENSSBOG00000005225	-	100	68.750	Saimiri_boliviensis_boliviensis