EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005042 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1467 bases
Position: chrJH651561.1:3150312-3151778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000006741	RtcB	PF01139.17	1.6e-64	1	2
ENSODEP00000006741	RtcB	PF01139.17	1.6e-64	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000006847	-	1227	-	ENSODEP00000006741	408 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005042	-	73	66.038	ENSODEG00000013033	-	99	66.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005042	-	100	65.743	ENSG00000100220	RTCB	100	65.743	Homo_sapiens
ENSODEG00000005042	-	100	63.168	ENSAPOG00000006040	rtcb	100	63.168	Acanthochromis_polyacanthus
ENSODEG00000005042	-	100	65.743	ENSAMEG00000016152	RTCB	100	65.743	Ailuropoda_melanoleuca
ENSODEG00000005042	-	100	63.843	ENSACIG00000009083	rtcb	100	63.843	Amphilophus_citrinellus
ENSODEG00000005042	-	100	63.366	ENSAOCG00000005662	rtcb	100	63.366	Amphiprion_ocellaris
ENSODEG00000005042	-	100	63.366	ENSAPEG00000024701	rtcb	100	63.366	Amphiprion_percula
ENSODEG00000005042	-	95	58.932	ENSAPEG00000024653	rtcb	100	58.932	Amphiprion_percula
ENSODEG00000005042	-	100	62.970	ENSATEG00000000618	rtcb	100	62.970	Anabas_testudineus
ENSODEG00000005042	-	100	62.620	ENSACAG00000014817	RTCB	100	62.620	Anolis_carolinensis
ENSODEG00000005042	-	100	48.035	ENSANAG00000023724	-	100	48.035	Aotus_nancymaae
ENSODEG00000005042	-	100	55.446	ENSANAG00000018191	-	91	55.446	Aotus_nancymaae
ENSODEG00000005042	-	100	62.178	ENSACLG00000008367	rtcb	100	62.178	Astatotilapia_calliptera
ENSODEG00000005042	-	100	62.772	ENSAMXG00000042320	rtcb	100	62.772	Astyanax_mexicanus
ENSODEG00000005042	-	100	65.941	ENSBTAG00000011070	RTCB	100	65.941	Bos_taurus
ENSODEG00000005042	-	100	49.901	WBGene00008877	rtcb-1	100	49.901	Caenorhabditis_elegans
ENSODEG00000005042	-	100	65.347	ENSCJAG00000006128	RTCB	100	65.347	Callithrix_jacchus
ENSODEG00000005042	-	100	63.366	ENSCAFG00000010789	-	100	63.366	Canis_familiaris
ENSODEG00000005042	-	100	65.743	ENSCAFG00000001785	RTCB	100	65.743	Canis_familiaris
ENSODEG00000005042	-	87	65.358	ENSCAFG00020018953	-	98	65.358	Canis_lupus_dingo
ENSODEG00000005042	-	100	65.743	ENSCAFG00020004890	-	100	65.743	Canis_lupus_dingo
ENSODEG00000005042	-	100	65.941	ENSCHIG00000027009	-	100	65.941	Capra_hircus
ENSODEG00000005042	-	100	65.149	ENSTSYG00000012320	RTCB	100	65.149	Carlito_syrichta
ENSODEG00000005042	-	92	65.042	ENSCAPG00000011647	RTCB	95	65.042	Cavia_aperea
ENSODEG00000005042	-	100	65.347	ENSCCAG00000000618	RTCB	100	65.347	Cebus_capucinus
ENSODEG00000005042	-	100	65.743	ENSCATG00000033424	RTCB	100	65.743	Cercocebus_atys
ENSODEG00000005042	-	100	65.743	ENSCLAG00000007997	RTCB	100	65.743	Chinchilla_lanigera
ENSODEG00000005042	-	100	65.545	ENSCSAG00000008351	RTCB	100	65.545	Chlorocebus_sabaeus
ENSODEG00000005042	-	93	66.667	ENSCHOG00000009123	RTCB	89	66.667	Choloepus_hoffmanni
ENSODEG00000005042	-	100	64.356	ENSCPBG00000023184	RTCB	100	64.356	Chrysemys_picta_bellii
ENSODEG00000005042	-	100	54.257	ENSCING00000003830	-	100	54.257	Ciona_intestinalis
ENSODEG00000005042	-	100	54.455	ENSCSAVG00000008124	-	99	54.455	Ciona_savignyi
ENSODEG00000005042	-	100	62.970	ENSCANG00000001891	RTCB	100	62.970	Colobus_angolensis_palliatus
ENSODEG00000005042	-	100	65.347	ENSCGRG00001011173	Rtcb	100	65.347	Cricetulus_griseus_chok1gshd
ENSODEG00000005042	-	92	64.544	ENSCGRG00000009587	-	96	64.544	Cricetulus_griseus_crigri
ENSODEG00000005042	-	100	62.574	ENSCSEG00000003986	rtcb	100	62.574	Cynoglossus_semilaevis
ENSODEG00000005042	-	74	63.757	ENSCVAG00000000569	rtcb	86	63.757	Cyprinodon_variegatus
ENSODEG00000005042	-	100	62.376	ENSDARG00000101047	rtcb	100	62.376	Danio_rerio
ENSODEG00000005042	-	80	63.882	ENSDNOG00000012425	RTCB	99	63.882	Dasypus_novemcinctus
ENSODEG00000005042	-	100	65.545	ENSDORG00000010855	Rtcb	100	65.545	Dipodomys_ordii
ENSODEG00000005042	-	100	57.228	FBgn0032781	RtcB	99	57.228	Drosophila_melanogaster
ENSODEG00000005042	-	100	60.594	ENSETEG00000001988	RTCB	100	60.594	Echinops_telfairi
ENSODEG00000005042	-	100	57.624	ENSEBUG00000014235	rtcb	100	57.624	Eptatretus_burgeri
ENSODEG00000005042	-	100	65.545	ENSEASG00005019059	RTCB	100	65.545	Equus_asinus_asinus
ENSODEG00000005042	-	100	65.545	ENSECAG00000023998	RTCB	100	65.545	Equus_caballus
ENSODEG00000005042	-	86	60.850	ENSEEUG00000006251	RTCB	100	60.850	Erinaceus_europaeus
ENSODEG00000005042	-	100	54.631	ENSELUG00000009275	rtcb	100	54.631	Esox_lucius
ENSODEG00000005042	-	100	65.743	ENSFCAG00000026480	RTCB	100	65.743	Felis_catus
ENSODEG00000005042	-	100	64.356	ENSFALG00000013334	RTCB	100	64.356	Ficedula_albicollis
ENSODEG00000005042	-	100	65.545	ENSFDAG00000018150	RTCB	100	65.545	Fukomys_damarensis
ENSODEG00000005042	-	100	62.772	ENSFHEG00000009595	rtcb	100	62.772	Fundulus_heteroclitus
ENSODEG00000005042	-	100	61.386	ENSGMOG00000018882	rtcb	100	61.386	Gadus_morhua
ENSODEG00000005042	-	100	64.158	ENSGALG00000012611	RTCB	100	64.158	Gallus_gallus
ENSODEG00000005042	-	100	62.970	ENSGAFG00000004198	rtcb	100	62.970	Gambusia_affinis
ENSODEG00000005042	-	100	61.980	ENSGACG00000000586	rtcb	100	61.980	Gasterosteus_aculeatus
ENSODEG00000005042	-	91	63.034	ENSGAGG00000019133	RTCB	97	63.034	Gopherus_agassizii
ENSODEG00000005042	-	100	65.743	ENSGGOG00000011402	RTCB	100	65.743	Gorilla_gorilla
ENSODEG00000005042	-	100	62.178	ENSHBUG00000020571	rtcb	100	62.178	Haplochromis_burtoni
ENSODEG00000005042	-	91	52.817	ENSHGLG00000001066	-	99	52.817	Heterocephalus_glaber_female
ENSODEG00000005042	-	100	65.545	ENSHGLG00000004492	RTCB	100	65.545	Heterocephalus_glaber_female
ENSODEG00000005042	-	100	65.545	ENSHGLG00100008965	RTCB	100	65.545	Heterocephalus_glaber_male
ENSODEG00000005042	-	100	60.947	ENSHCOG00000006450	rtcb	100	60.947	Hippocampus_comes
ENSODEG00000005042	-	100	62.772	ENSIPUG00000015443	rtcb	100	62.772	Ictalurus_punctatus
ENSODEG00000005042	-	100	65.347	ENSSTOG00000003878	RTCB	100	65.347	Ictidomys_tridecemlineatus
ENSODEG00000005042	-	100	64.950	ENSJJAG00000010667	Rtcb	100	64.950	Jaculus_jaculus
ENSODEG00000005042	-	100	63.366	ENSKMAG00000013178	rtcb	100	63.366	Kryptolebias_marmoratus
ENSODEG00000005042	-	100	63.168	ENSLBEG00000010566	RTCB	100	63.168	Labrus_bergylta
ENSODEG00000005042	-	100	63.273	ENSLBEG00000000214	rtcb	100	63.273	Labrus_bergylta
ENSODEG00000005042	-	100	63.564	ENSLACG00000013033	RTCB	100	63.564	Latimeria_chalumnae
ENSODEG00000005042	-	100	62.574	ENSLOCG00000016515	rtcb	99	62.574	Lepisosteus_oculatus
ENSODEG00000005042	-	100	64.554	ENSLAFG00000002082	RTCB	100	64.554	Loxodonta_africana
ENSODEG00000005042	-	100	65.545	ENSMFAG00000034419	RTCB	100	65.545	Macaca_fascicularis
ENSODEG00000005042	-	100	65.545	ENSMMUG00000006720	RTCB	100	65.545	Macaca_mulatta
ENSODEG00000005042	-	100	65.545	ENSMNEG00000040669	RTCB	100	65.545	Macaca_nemestrina
ENSODEG00000005042	-	100	65.743	ENSMLEG00000040505	RTCB	100	65.743	Mandrillus_leucophaeus
ENSODEG00000005042	-	100	62.970	ENSMAMG00000020676	rtcb	100	62.970	Mastacembelus_armatus
ENSODEG00000005042	-	100	62.178	ENSMZEG00005018942	rtcb	100	62.178	Maylandia_zebra
ENSODEG00000005042	-	100	63.905	ENSMGAG00000012805	RTCB	100	63.905	Meleagris_gallopavo
ENSODEG00000005042	-	57	67.257	ENSMAUG00000008301	Rtcb	99	67.257	Mesocricetus_auratus
ENSODEG00000005042	-	99	56.900	ENSMICG00000036677	-	99	56.900	Microcebus_murinus
ENSODEG00000005042	-	100	65.545	ENSMICG00000013303	-	100	65.545	Microcebus_murinus
ENSODEG00000005042	-	100	65.347	ENSMOCG00000002440	Rtcb	100	65.347	Microtus_ochrogaster
ENSODEG00000005042	-	100	62.376	ENSMMOG00000005987	rtcb	100	62.376	Mola_mola
ENSODEG00000005042	-	100	65.743	ENSMODG00000001414	RTCB	100	65.743	Monodelphis_domestica
ENSODEG00000005042	-	100	63.366	ENSMALG00000007603	rtcb	100	63.366	Monopterus_albus
ENSODEG00000005042	-	100	65.149	MGP_CAROLIEiJ_G0015689	Rtcb	100	65.149	Mus_caroli
ENSODEG00000005042	-	100	65.149	ENSMUSG00000001783	Rtcb	100	65.149	Mus_musculus
ENSODEG00000005042	-	100	65.149	MGP_PahariEiJ_G0031396	Rtcb	100	65.149	Mus_pahari
ENSODEG00000005042	-	100	65.149	MGP_SPRETEiJ_G0016507	Rtcb	100	65.149	Mus_spretus
ENSODEG00000005042	-	100	65.743	ENSMPUG00000012285	RTCB	100	65.743	Mustela_putorius_furo
ENSODEG00000005042	-	100	63.725	ENSMLUG00000007803	RTCB	100	63.725	Myotis_lucifugus
ENSODEG00000005042	-	69	76.364	ENSNGAG00000005093	Rtcb	98	76.364	Nannospalax_galili
ENSODEG00000005042	-	100	62.376	ENSNBRG00000017202	rtcb	100	62.376	Neolamprologus_brichardi
ENSODEG00000005042	-	100	65.743	ENSNLEG00000004960	RTCB	100	65.743	Nomascus_leucogenys
ENSODEG00000005042	-	78	71.930	ENSMEUG00000007809	-	75	71.930	Notamacropus_eugenii
ENSODEG00000005042	-	64	64.087	ENSOPRG00000003488	RTCB	69	64.087	Ochotona_princeps
ENSODEG00000005042	-	100	62.574	ENSONIG00000007474	rtcb	100	62.574	Oreochromis_niloticus
ENSODEG00000005042	-	100	65.347	ENSOANG00000005524	RTCB	100	65.347	Ornithorhynchus_anatinus
ENSODEG00000005042	-	91	64.530	ENSOCUG00000008270	RTCB	96	64.530	Oryctolagus_cuniculus
ENSODEG00000005042	-	100	62.970	ENSORLG00000020093	rtcb	100	62.970	Oryzias_latipes
ENSODEG00000005042	-	100	62.772	ENSORLG00020003706	rtcb	100	62.772	Oryzias_latipes_hni
ENSODEG00000005042	-	100	62.970	ENSORLG00015002968	rtcb	100	62.970	Oryzias_latipes_hsok
ENSODEG00000005042	-	100	62.574	ENSOMEG00000021278	rtcb	100	62.574	Oryzias_melastigma
ENSODEG00000005042	-	100	65.149	ENSOGAG00000001425	RTCB	100	65.149	Otolemur_garnettii
ENSODEG00000005042	-	100	65.941	ENSOARG00000018008	RTCB	100	65.941	Ovis_aries
ENSODEG00000005042	-	100	65.743	ENSPPAG00000028667	RTCB	100	65.743	Pan_paniscus
ENSODEG00000005042	-	100	65.743	ENSPPRG00000004038	RTCB	100	65.743	Panthera_pardus
ENSODEG00000005042	-	92	65.944	ENSPTIG00000020499	RTCB	97	66.161	Panthera_tigris_altaica
ENSODEG00000005042	-	100	65.743	ENSPTRG00000014287	RTCB	100	65.743	Pan_troglodytes
ENSODEG00000005042	-	100	65.545	ENSPANG00000016035	RTCB	100	65.545	Papio_anubis
ENSODEG00000005042	-	100	62.178	ENSPKIG00000001881	rtcb	100	62.178	Paramormyrops_kingsleyae
ENSODEG00000005042	-	89	64.130	ENSPSIG00000011690	RTCB	100	64.130	Pelodiscus_sinensis
ENSODEG00000005042	-	100	63.168	ENSPMGG00000016672	rtcb	100	63.168	Periophthalmus_magnuspinnatus
ENSODEG00000005042	-	100	65.149	ENSPEMG00000019548	Rtcb	100	65.149	Peromyscus_maniculatus_bairdii
ENSODEG00000005042	-	100	60.792	ENSPMAG00000005657	rtcb	100	60.792	Petromyzon_marinus
ENSODEG00000005042	-	100	65.743	ENSPCIG00000009467	RTCB	100	65.743	Phascolarctos_cinereus
ENSODEG00000005042	-	100	63.366	ENSPFOG00000003058	rtcb	100	63.366	Poecilia_formosa
ENSODEG00000005042	-	100	63.168	ENSPLAG00000017663	rtcb	100	63.168	Poecilia_latipinna
ENSODEG00000005042	-	100	63.366	ENSPMEG00000006227	rtcb	100	63.366	Poecilia_mexicana
ENSODEG00000005042	-	100	62.970	ENSPREG00000018467	rtcb	100	62.970	Poecilia_reticulata
ENSODEG00000005042	-	100	65.743	ENSPPYG00000011752	RTCB	100	65.743	Pongo_abelii
ENSODEG00000005042	-	91	52.654	ENSPCAG00000013641	RTCB	99	52.654	Procavia_capensis
ENSODEG00000005042	-	100	65.545	ENSPCOG00000017243	RTCB	100	65.545	Propithecus_coquereli
ENSODEG00000005042	-	91	64.103	ENSPVAG00000002380	RTCB	99	64.103	Pteropus_vampyrus
ENSODEG00000005042	-	100	62.178	ENSPNYG00000022760	rtcb	100	62.178	Pundamilia_nyererei
ENSODEG00000005042	-	100	63.366	ENSPNAG00000009209	rtcb	100	63.366	Pygocentrus_nattereri
ENSODEG00000005042	-	100	65.149	ENSRNOG00000004813	Rtcb	100	65.149	Rattus_norvegicus
ENSODEG00000005042	-	100	64.463	ENSRBIG00000042090	RTCB	100	64.463	Rhinopithecus_bieti
ENSODEG00000005042	-	100	63.366	ENSSBOG00000020085	-	100	63.366	Saimiri_boliviensis_boliviensis
ENSODEG00000005042	-	92	65.042	ENSSHAG00000016277	RTCB	99	65.042	Sarcophilus_harrisii
ENSODEG00000005042	-	100	61.980	ENSSFOG00015011572	RTCB	100	61.980	Scleropages_formosus
ENSODEG00000005042	-	100	61.782	ENSSFOG00015000763	rtcb	100	61.782	Scleropages_formosus
ENSODEG00000005042	-	100	60.594	ENSSMAG00000005096	rtcb	100	60.594	Scophthalmus_maximus
ENSODEG00000005042	-	100	62.574	ENSSDUG00000012605	rtcb	100	62.574	Seriola_dumerili
ENSODEG00000005042	-	100	62.574	ENSSLDG00000019458	rtcb	100	62.574	Seriola_lalandi_dorsalis
ENSODEG00000005042	-	51	80.000	ENSSARG00000004799	-	53	80.000	Sorex_araneus
ENSODEG00000005042	-	100	64.356	ENSSPUG00000012814	RTCB	100	64.356	Sphenodon_punctatus
ENSODEG00000005042	-	100	63.366	ENSSPAG00000004623	rtcb	100	63.366	Stegastes_partitus
ENSODEG00000005042	-	100	65.743	ENSSSCG00000000158	RTCB	100	65.743	Sus_scrofa
ENSODEG00000005042	-	100	64.356	ENSTGUG00000010947	RTCB	99	64.356	Taeniopygia_guttata
ENSODEG00000005042	-	89	62.174	ENSTRUG00000009880	rtcb	100	62.174	Takifugu_rubripes
ENSODEG00000005042	-	100	62.178	ENSTNIG00000002484	rtcb	100	62.178	Tetraodon_nigroviridis
ENSODEG00000005042	-	100	54.762	ENSTBEG00000004418	RTCB	100	54.762	Tupaia_belangeri
ENSODEG00000005042	-	91	64.316	ENSTTRG00000006417	RTCB	99	64.316	Tursiops_truncatus
ENSODEG00000005042	-	100	65.743	ENSUAMG00000022792	RTCB	100	65.743	Ursus_americanus
ENSODEG00000005042	-	100	65.743	ENSUMAG00000017225	RTCB	100	65.743	Ursus_maritimus
ENSODEG00000005042	-	100	65.545	ENSVPAG00000005375	RTCB	100	65.545	Vicugna_pacos
ENSODEG00000005042	-	100	65.743	ENSVVUG00000023408	RTCB	100	66.585	Vulpes_vulpes
ENSODEG00000005042	-	100	62.970	ENSXETG00000011523	rtcb	100	62.970	Xenopus_tropicalis
ENSODEG00000005042	-	100	62.970	ENSXMAG00000002855	rtcb	100	62.970	Xiphophorus_maculatus