EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005294 (Gene tree)
Gene ID: 101569982
Gene Symbol: -
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 59497 bases
Position: chrJH651553.1:4675824-4735320
Accession: 101569982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007092	RNA_pol_L_2	PF13656.6	8.7e-28	1	1
ENSODEP00000007092	RNA_pol_L	PF01193.24	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007200	-	102	-	ENSODEP00000007093	33 (aa)	-	UPI00001A92E3
ENSODET00000007199	-	662	XM_004631047	ENSODEP00000007092	133 (aa)	XP_004631104	UPI0003339FBB

Gene Model

Click here to download ENSODEG00000005294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005294	-	100	85.714	ENSODEG00000014801	-	100	85.714
ENSODEG00000005294	-	80	33.019	ENSODEG00000015648	-	88	33.019
ENSODEG00000005294	-	56	33.333	ENSODEG00000008559	-	69	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005294	-	100	95.489	ENSG00000186184	POLR1D	100	95.489	Homo_sapiens
ENSODEG00000005294	-	76	68.317	ENSAPOG00000021882	polr1d	94	69.000	Acanthochromis_polyacanthus
ENSODEG00000005294	-	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSODEG00000005294	-	80	72.897	ENSACIG00000013328	polr1d	93	72.897	Amphilophus_citrinellus
ENSODEG00000005294	-	84	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSODEG00000005294	-	84	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSODEG00000005294	-	80	67.925	ENSATEG00000019322	polr1d	93	67.925	Anabas_testudineus
ENSODEG00000005294	-	83	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSODEG00000005294	-	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSODEG00000005294	-	80	71.698	ENSACLG00000023805	polr1d	95	71.028	Astatotilapia_calliptera
ENSODEG00000005294	-	80	67.925	ENSAMXG00000036118	polr1d	92	67.925	Astyanax_mexicanus
ENSODEG00000005294	-	100	92.481	ENSBTAG00000033252	-	100	92.481	Bos_taurus
ENSODEG00000005294	-	100	92.481	ENSBTAG00000008642	POLR1D	100	92.481	Bos_taurus
ENSODEG00000005294	-	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSODEG00000005294	-	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSODEG00000005294	-	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSODEG00000005294	-	100	93.233	ENSCHIG00000021910	POLR1D	100	93.233	Capra_hircus
ENSODEG00000005294	-	93	91.129	ENSTSYG00000026817	-	93	91.129	Carlito_syrichta
ENSODEG00000005294	-	96	80.769	ENSTSYG00000034852	-	98	80.672	Carlito_syrichta
ENSODEG00000005294	-	96	57.031	ENSCAPG00000006058	-	99	57.031	Cavia_aperea
ENSODEG00000005294	-	96	56.250	ENSCPOG00000030450	-	99	56.250	Cavia_porcellus
ENSODEG00000005294	-	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSODEG00000005294	-	100	76.692	ENSCCAG00000020191	-	100	76.692	Cebus_capucinus
ENSODEG00000005294	-	100	84.962	ENSCATG00000022900	-	100	84.962	Cercocebus_atys
ENSODEG00000005294	-	100	93.985	ENSCATG00000030710	-	100	93.985	Cercocebus_atys
ENSODEG00000005294	-	93	98.387	ENSCLAG00000017623	POLR1D	100	98.387	Chinchilla_lanigera
ENSODEG00000005294	-	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSODEG00000005294	-	100	93.985	ENSCANG00000028632	-	100	93.985	Colobus_angolensis_palliatus
ENSODEG00000005294	-	100	90.977	ENSCANG00000037694	-	100	90.977	Colobus_angolensis_palliatus
ENSODEG00000005294	-	100	92.481	ENSCGRG00001021251	Polr1d	100	92.481	Cricetulus_griseus_chok1gshd
ENSODEG00000005294	-	100	92.481	ENSCGRG00000011639	Polr1d	100	92.481	Cricetulus_griseus_crigri
ENSODEG00000005294	-	78	69.231	ENSCSEG00000018268	polr1d	91	69.811	Cynoglossus_semilaevis
ENSODEG00000005294	-	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSODEG00000005294	-	80	67.290	ENSDARG00000037570	polr1d	96	67.290	Danio_rerio
ENSODEG00000005294	-	100	93.233	ENSDNOG00000043676	-	100	93.233	Dasypus_novemcinctus
ENSODEG00000005294	-	100	91.045	ENSDNOG00000046247	-	100	91.045	Dasypus_novemcinctus
ENSODEG00000005294	-	100	93.233	ENSDORG00000029155	Polr1d	100	93.233	Dipodomys_ordii
ENSODEG00000005294	-	68	45.055	FBgn0086447	l(2)37Cg	83	45.055	Drosophila_melanogaster
ENSODEG00000005294	-	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSODEG00000005294	-	65	73.256	ENSEBUG00000011748	polr1d	60	73.256	Eptatretus_burgeri
ENSODEG00000005294	-	95	95.238	ENSEASG00005022487	POLR1D	98	95.238	Equus_asinus_asinus
ENSODEG00000005294	-	93	95.161	ENSEEUG00000013144	POLR1D	100	95.161	Erinaceus_europaeus
ENSODEG00000005294	-	80	68.868	ENSELUG00000005105	rpac2	93	68.868	Esox_lucius
ENSODEG00000005294	-	100	93.985	ENSFCAG00000030162	POLR1D	100	93.985	Felis_catus
ENSODEG00000005294	-	71	75.789	ENSFALG00000011463	POLR1D	94	75.789	Ficedula_albicollis
ENSODEG00000005294	-	100	95.489	ENSFDAG00000004463	POLR1D	100	95.489	Fukomys_damarensis
ENSODEG00000005294	-	80	74.074	ENSFHEG00000015410	polr1d	94	74.074	Fundulus_heteroclitus
ENSODEG00000005294	-	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSODEG00000005294	-	88	66.949	ENSGACG00000018585	polr1d	100	66.949	Gasterosteus_aculeatus
ENSODEG00000005294	-	79	79.048	ENSGAGG00000008503	POLR1D	92	79.048	Gopherus_agassizii
ENSODEG00000005294	-	100	95.489	ENSGGOG00000004235	POLR1D	100	95.489	Gorilla_gorilla
ENSODEG00000005294	-	80	71.698	ENSHBUG00000002111	polr1d	93	71.698	Haplochromis_burtoni
ENSODEG00000005294	-	100	95.489	ENSHGLG00000003202	POLR1D	100	95.489	Heterocephalus_glaber_female
ENSODEG00000005294	-	100	95.489	ENSHGLG00100009393	POLR1D	100	95.489	Heterocephalus_glaber_male
ENSODEG00000005294	-	80	68.868	ENSHCOG00000003258	polr1d	93	68.868	Hippocampus_comes
ENSODEG00000005294	-	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSODEG00000005294	-	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSODEG00000005294	-	95	72.222	ENSJJAG00000021667	-	75	72.222	Jaculus_jaculus
ENSODEG00000005294	-	97	87.218	ENSJJAG00000022671	-	100	90.000	Jaculus_jaculus
ENSODEG00000005294	-	79	67.619	ENSKMAG00000015256	polr1d	92	67.619	Kryptolebias_marmoratus
ENSODEG00000005294	-	79	70.476	ENSLBEG00000015919	polr1d	92	70.476	Labrus_bergylta
ENSODEG00000005294	-	87	66.379	ENSLACG00000006810	POLR1D	96	66.379	Latimeria_chalumnae
ENSODEG00000005294	-	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSODEG00000005294	-	100	86.466	ENSLAFG00000032290	POLR1D	100	86.466	Loxodonta_africana
ENSODEG00000005294	-	94	93.600	ENSMFAG00000045264	POLR1D	97	93.600	Macaca_fascicularis
ENSODEG00000005294	-	87	93.966	ENSMMUG00000020386	POLR1D	100	93.966	Macaca_mulatta
ENSODEG00000005294	-	100	75.188	ENSMMUG00000041570	-	100	75.188	Macaca_mulatta
ENSODEG00000005294	-	100	94.737	ENSMNEG00000008630	-	100	94.737	Macaca_nemestrina
ENSODEG00000005294	-	100	78.195	ENSMNEG00000038120	-	100	78.195	Macaca_nemestrina
ENSODEG00000005294	-	100	94.737	ENSMLEG00000041048	-	100	94.737	Mandrillus_leucophaeus
ENSODEG00000005294	-	100	84.211	ENSMLEG00000032251	-	100	84.211	Mandrillus_leucophaeus
ENSODEG00000005294	-	76	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSODEG00000005294	-	80	71.028	ENSMZEG00005006638	polr1d	95	71.028	Maylandia_zebra
ENSODEG00000005294	-	69	76.087	ENSMGAG00000005322	POLR1D	84	76.087	Meleagris_gallopavo
ENSODEG00000005294	-	100	92.481	ENSMAUG00000001946	Polr1d	100	92.481	Mesocricetus_auratus
ENSODEG00000005294	-	99	79.545	ENSMICG00000007349	-	100	79.545	Microcebus_murinus
ENSODEG00000005294	-	100	94.737	ENSMICG00000016883	-	100	94.737	Microcebus_murinus
ENSODEG00000005294	-	99	91.667	ENSMOCG00000021288	Polr1d	99	91.667	Microtus_ochrogaster
ENSODEG00000005294	-	80	68.868	ENSMMOG00000009605	polr1d	93	68.868	Mola_mola
ENSODEG00000005294	-	79	82.857	ENSMODG00000023881	POLR1D	92	82.857	Monodelphis_domestica
ENSODEG00000005294	-	78	68.269	ENSMALG00000010652	polr1d	91	68.269	Monopterus_albus
ENSODEG00000005294	-	100	88.722	MGP_CAROLIEiJ_G0028034	Polr1d	100	88.722	Mus_caroli
ENSODEG00000005294	-	100	88.722	ENSMUSG00000029642	Polr1d	100	88.722	Mus_musculus
ENSODEG00000005294	-	100	87.970	MGP_PahariEiJ_G0024600	Polr1d	100	87.970	Mus_pahari
ENSODEG00000005294	-	100	89.474	MGP_SPRETEiJ_G0029032	Polr1d	100	89.474	Mus_spretus
ENSODEG00000005294	-	99	83.333	ENSMLUG00000004118	-	99	83.333	Myotis_lucifugus
ENSODEG00000005294	-	100	93.233	ENSMLUG00000027169	-	100	93.233	Myotis_lucifugus
ENSODEG00000005294	-	87	93.103	ENSNGAG00000006014	Polr1d	100	93.103	Nannospalax_galili
ENSODEG00000005294	-	80	71.698	ENSNBRG00000020327	polr1d	93	71.698	Neolamprologus_brichardi
ENSODEG00000005294	-	100	95.489	ENSNLEG00000000358	POLR1D	100	95.489	Nomascus_leucogenys
ENSODEG00000005294	-	79	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSODEG00000005294	-	100	93.233	ENSOCUG00000015706	POLR1D	82	93.233	Oryctolagus_cuniculus
ENSODEG00000005294	-	80	70.755	ENSORLG00000010257	polr1d	93	70.755	Oryzias_latipes
ENSODEG00000005294	-	83	68.468	ENSORLG00020000533	polr1d	75	68.468	Oryzias_latipes_hni
ENSODEG00000005294	-	85	69.027	ENSORLG00015013267	polr1d	75	69.027	Oryzias_latipes_hsok
ENSODEG00000005294	-	89	66.949	ENSOMEG00000014912	polr1d	79	66.949	Oryzias_melastigma
ENSODEG00000005294	-	100	93.985	ENSOGAG00000014601	POLR1D	100	93.985	Otolemur_garnettii
ENSODEG00000005294	-	94	92.800	ENSOARG00000017005	POLR1D	96	92.800	Ovis_aries
ENSODEG00000005294	-	100	94.737	ENSPPAG00000028138	POLR1D	100	94.737	Pan_paniscus
ENSODEG00000005294	-	99	93.939	ENSPPRG00000003381	POLR1D	99	93.939	Panthera_pardus
ENSODEG00000005294	-	93	93.548	ENSPTIG00000018137	POLR1D	93	93.548	Panthera_tigris_altaica
ENSODEG00000005294	-	100	95.489	ENSPTRG00000005734	POLR1D	100	95.489	Pan_troglodytes
ENSODEG00000005294	-	100	83.459	ENSPANG00000035051	-	100	83.459	Papio_anubis
ENSODEG00000005294	-	100	94.737	ENSPANG00000020259	-	100	94.737	Papio_anubis
ENSODEG00000005294	-	87	61.207	ENSPKIG00000021891	polr1d	90	51.754	Paramormyrops_kingsleyae
ENSODEG00000005294	-	83	74.775	ENSPSIG00000011822	POLR1D	86	74.775	Pelodiscus_sinensis
ENSODEG00000005294	-	88	60.169	ENSPMGG00000012998	POLR1D	87	60.169	Periophthalmus_magnuspinnatus
ENSODEG00000005294	-	79	70.476	ENSPMGG00000010359	polr1d	91	70.476	Periophthalmus_magnuspinnatus
ENSODEG00000005294	-	100	88.722	ENSPEMG00000006336	-	100	88.722	Peromyscus_maniculatus_bairdii
ENSODEG00000005294	-	82	61.468	ENSPMAG00000004228	polr1d	92	61.468	Petromyzon_marinus
ENSODEG00000005294	-	79	82.857	ENSPCIG00000001673	POLR1D	92	82.857	Phascolarctos_cinereus
ENSODEG00000005294	-	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSODEG00000005294	-	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSODEG00000005294	-	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSODEG00000005294	-	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSODEG00000005294	-	100	94.737	ENSPCOG00000028175	POLR1D	100	94.737	Propithecus_coquereli
ENSODEG00000005294	-	80	71.698	ENSPNYG00000000107	polr1d	93	71.698	Pundamilia_nyererei
ENSODEG00000005294	-	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSODEG00000005294	-	100	94.737	ENSRBIG00000036378	-	100	94.737	Rhinopithecus_bieti
ENSODEG00000005294	-	100	90.977	ENSRBIG00000000336	-	100	90.977	Rhinopithecus_bieti
ENSODEG00000005294	-	100	94.737	ENSRROG00000042232	-	100	94.737	Rhinopithecus_roxellana
ENSODEG00000005294	-	100	90.977	ENSRROG00000026751	-	100	90.977	Rhinopithecus_roxellana
ENSODEG00000005294	-	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSODEG00000005294	-	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSODEG00000005294	-	86	91.228	ENSSBOG00000030146	-	84	91.228	Saimiri_boliviensis_boliviensis
ENSODEG00000005294	-	86	75.439	ENSSHAG00000001190	POLR1D	88	75.439	Sarcophilus_harrisii
ENSODEG00000005294	-	83	69.369	ENSSFOG00015011375	polr1d	97	69.369	Scleropages_formosus
ENSODEG00000005294	-	80	68.868	ENSSMAG00000011861	polr1d	93	68.868	Scophthalmus_maximus
ENSODEG00000005294	-	80	67.925	ENSSDUG00000011930	polr1d	93	67.925	Seriola_dumerili
ENSODEG00000005294	-	86	61.739	ENSSLDG00000023871	polr1d	97	61.739	Seriola_lalandi_dorsalis
ENSODEG00000005294	-	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSODEG00000005294	-	79	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSODEG00000005294	-	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSODEG00000005294	-	100	93.233	ENSSSCG00000009310	POLR1D	100	93.233	Sus_scrofa
ENSODEG00000005294	-	71	75.789	ENSTGUG00000005450	POLR1D	99	75.789	Taeniopygia_guttata
ENSODEG00000005294	-	78	67.308	ENSTRUG00000019741	polr1d	91	67.308	Takifugu_rubripes
ENSODEG00000005294	-	93	92.742	ENSTBEG00000007006	POLR1D	100	92.742	Tupaia_belangeri
ENSODEG00000005294	-	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSODEG00000005294	-	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSODEG00000005294	-	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSODEG00000005294	-	74	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSODEG00000005294	-	74	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus