EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005309 (Gene tree)
Gene ID: 101591972
Gene Symbol: PRDM10
Alias: -
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 63216 bases
Position: chrJH651651.1:6989851-7053066
Accession: 101591972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007114	zf-C2H2	PF00096.26	1.1e-27	1	4
ENSODEP00000007114	zf-C2H2	PF00096.26	1.1e-27	2	4
ENSODEP00000007114	zf-C2H2	PF00096.26	1.1e-27	3	4
ENSODEP00000007114	zf-C2H2	PF00096.26	1.1e-27	4	4
ENSODEP00000007113	zf-C2H2	PF00096.26	2.7e-27	1	4
ENSODEP00000007113	zf-C2H2	PF00096.26	2.7e-27	2	4
ENSODEP00000007113	zf-C2H2	PF00096.26	2.7e-27	3	4
ENSODEP00000007113	zf-C2H2	PF00096.26	2.7e-27	4	4
ENSODEP00000007114	zf-met	PF12874.7	3.8e-06	1	2
ENSODEP00000007114	zf-met	PF12874.7	3.8e-06	2	2
ENSODEP00000007113	zf-met	PF12874.7	5.8e-06	1	2
ENSODEP00000007113	zf-met	PF12874.7	5.8e-06	2	2
ENSODEP00000007114	zf-C2H2_jaz	PF12171.8	8.2e-14	1	1
ENSODEP00000007113	zf-C2H2_jaz	PF12171.8	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007221	PRDM10-202	3270	-	ENSODEP00000007114	1089 (aa)	-	-
ENSODET00000007220	PRDM10-201	3507	XM_004641420	ENSODEP00000007113	1168 (aa)	-	-
ENSODET00000007222	PRDM10-203	984	-	ENSODEP00000007115	327 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005309	PRDM10	59	32.984	ENSODEG00000009133	PRDM5	75	36.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005309	PRDM10	99	94.805	ENSG00000170325	PRDM10	100	90.508	Homo_sapiens
ENSODEG00000005309	PRDM10	99	94.737	ENSAMEG00000002425	PRDM10	97	90.927	Ailuropoda_melanoleuca
ENSODEG00000005309	PRDM10	99	84.028	ENSAPLG00000004858	PRDM10	100	81.387	Anas_platyrhynchos
ENSODEG00000005309	PRDM10	99	94.805	ENSANAG00000022064	PRDM10	91	94.805	Aotus_nancymaae
ENSODEG00000005309	PRDM10	99	93.506	ENSBTAG00000019001	PRDM10	100	89.031	Bos_taurus
ENSODEG00000005309	PRDM10	97	98.214	ENSCJAG00000009235	PRDM10	100	90.670	Callithrix_jacchus
ENSODEG00000005309	PRDM10	99	93.671	ENSCAFG00000010164	PRDM10	100	90.363	Canis_familiaris
ENSODEG00000005309	PRDM10	100	90.894	ENSCAFG00020010152	PRDM10	100	90.894	Canis_lupus_dingo
ENSODEG00000005309	PRDM10	99	93.506	ENSCHIG00000026530	PRDM10	100	89.201	Capra_hircus
ENSODEG00000005309	PRDM10	99	94.805	ENSTSYG00000000544	PRDM10	100	91.610	Carlito_syrichta
ENSODEG00000005309	PRDM10	100	87.596	ENSCAPG00000017296	PRDM10	99	89.631	Cavia_aperea
ENSODEG00000005309	PRDM10	99	88.123	ENSCPOG00000000389	PRDM10	98	88.123	Cavia_porcellus
ENSODEG00000005309	PRDM10	99	94.805	ENSCCAG00000024567	PRDM10	100	90.925	Cebus_capucinus
ENSODEG00000005309	PRDM10	97	96.429	ENSCATG00000040031	PRDM10	100	91.171	Cercocebus_atys
ENSODEG00000005309	PRDM10	100	95.799	ENSCLAG00000014605	PRDM10	100	95.799	Chinchilla_lanigera
ENSODEG00000005309	PRDM10	99	93.506	ENSCSAG00000002202	PRDM10	100	91.426	Chlorocebus_sabaeus
ENSODEG00000005309	PRDM10	99	83.829	ENSCPBG00000026880	PRDM10	99	78.805	Chrysemys_picta_bellii
ENSODEG00000005309	PRDM10	99	93.506	ENSCANG00000032669	PRDM10	100	90.925	Colobus_angolensis_palliatus
ENSODEG00000005309	PRDM10	100	90.094	ENSCGRG00001021647	Prdm10	99	90.425	Cricetulus_griseus_chok1gshd
ENSODEG00000005309	PRDM10	100	90.094	ENSCGRG00000006562	Prdm10	99	90.425	Cricetulus_griseus_crigri
ENSODEG00000005309	PRDM10	82	91.381	ENSDNOG00000001366	PRDM10	95	91.381	Dasypus_novemcinctus
ENSODEG00000005309	PRDM10	100	91.275	ENSDORG00000014292	Prdm10	100	91.189	Dipodomys_ordii
ENSODEG00000005309	PRDM10	97	100.000	ENSEASG00005022914	PRDM10	100	91.249	Equus_asinus_asinus
ENSODEG00000005309	PRDM10	97	100.000	ENSECAG00000011499	PRDM10	100	91.164	Equus_caballus
ENSODEG00000005309	PRDM10	99	94.872	ENSFCAG00000004111	PRDM10	96	90.216	Felis_catus
ENSODEG00000005309	PRDM10	99	83.881	ENSFALG00000004873	PRDM10	100	78.115	Ficedula_albicollis
ENSODEG00000005309	PRDM10	100	90.985	ENSFDAG00000017311	PRDM10	100	90.735	Fukomys_damarensis
ENSODEG00000005309	PRDM10	99	84.325	ENSGALG00000033660	PRDM10	99	82.234	Gallus_gallus
ENSODEG00000005309	PRDM10	99	64.829	ENSGACG00000012293	prdm10	100	63.430	Gasterosteus_aculeatus
ENSODEG00000005309	PRDM10	99	82.458	ENSGAGG00000012523	PRDM10	99	79.949	Gopherus_agassizii
ENSODEG00000005309	PRDM10	99	94.805	ENSGGOG00000015359	PRDM10	100	91.475	Gorilla_gorilla
ENSODEG00000005309	PRDM10	100	93.057	ENSHGLG00000001106	PRDM10	99	93.057	Heterocephalus_glaber_female
ENSODEG00000005309	PRDM10	100	93.057	ENSHGLG00100002350	PRDM10	99	93.057	Heterocephalus_glaber_male
ENSODEG00000005309	PRDM10	99	94.805	ENSSTOG00000002015	PRDM10	100	91.773	Ictidomys_tridecemlineatus
ENSODEG00000005309	PRDM10	99	82.471	ENSJJAG00000021493	Prdm10	90	92.982	Jaculus_jaculus
ENSODEG00000005309	PRDM10	99	94.805	ENSLAFG00000031867	PRDM10	100	87.447	Loxodonta_africana
ENSODEG00000005309	PRDM10	97	96.429	ENSMFAG00000031008	PRDM10	100	91.256	Macaca_fascicularis
ENSODEG00000005309	PRDM10	97	96.429	ENSMMUG00000017555	PRDM10	100	91.256	Macaca_mulatta
ENSODEG00000005309	PRDM10	97	96.429	ENSMNEG00000036493	PRDM10	100	91.171	Macaca_nemestrina
ENSODEG00000005309	PRDM10	93	100.000	ENSMLEG00000042028	PRDM10	98	93.333	Mandrillus_leucophaeus
ENSODEG00000005309	PRDM10	99	84.179	ENSMGAG00000001112	PRDM10	100	78.671	Meleagris_gallopavo
ENSODEG00000005309	PRDM10	99	96.104	ENSMICG00000013888	PRDM10	100	91.002	Microcebus_murinus
ENSODEG00000005309	PRDM10	100	89.754	ENSMOCG00000021853	Prdm10	100	89.900	Microtus_ochrogaster
ENSODEG00000005309	PRDM10	82	83.554	ENSMODG00000004979	PRDM10	99	84.106	Monodelphis_domestica
ENSODEG00000005309	PRDM10	100	90.601	ENSMUSG00000042496	Prdm10	100	90.601	Mus_musculus
ENSODEG00000005309	PRDM10	100	90.545	MGP_SPRETEiJ_G0033061	-	100	90.545	Mus_spretus
ENSODEG00000005309	PRDM10	99	96.104	ENSMPUG00000008711	PRDM10	99	89.975	Mustela_putorius_furo
ENSODEG00000005309	PRDM10	100	89.576	ENSMLUG00000013051	PRDM10	100	89.576	Myotis_lucifugus
ENSODEG00000005309	PRDM10	100	91.438	ENSNGAG00000000580	Prdm10	100	91.610	Nannospalax_galili
ENSODEG00000005309	PRDM10	97	98.214	ENSNLEG00000007488	PRDM10	100	91.087	Nomascus_leucogenys
ENSODEG00000005309	PRDM10	99	79.608	ENSOANG00000000577	-	100	76.003	Ornithorhynchus_anatinus
ENSODEG00000005309	PRDM10	99	94.805	ENSOCUG00000003736	PRDM10	100	90.136	Oryctolagus_cuniculus
ENSODEG00000005309	PRDM10	99	92.208	ENSOGAG00000010723	PRDM10	100	89.594	Otolemur_garnettii
ENSODEG00000005309	PRDM10	99	93.506	ENSOARG00000014507	PRDM10	100	89.286	Ovis_aries
ENSODEG00000005309	PRDM10	97	96.429	ENSPPAG00000042881	PRDM10	100	91.304	Pan_paniscus
ENSODEG00000005309	PRDM10	99	94.805	ENSPPRG00000007002	PRDM10	100	89.805	Panthera_pardus
ENSODEG00000005309	PRDM10	99	94.805	ENSPTIG00000013331	PRDM10	100	89.720	Panthera_tigris_altaica
ENSODEG00000005309	PRDM10	99	93.506	ENSPTRG00000004477	PRDM10	100	91.390	Pan_troglodytes
ENSODEG00000005309	PRDM10	97	96.429	ENSPANG00000017470	PRDM10	100	92.137	Papio_anubis
ENSODEG00000005309	PRDM10	99	93.590	ENSPEMG00000014985	Prdm10	100	90.476	Peromyscus_maniculatus_bairdii
ENSODEG00000005309	PRDM10	99	94.805	ENSPPYG00000004061	PRDM10	100	90.847	Pongo_abelii
ENSODEG00000005309	PRDM10	91	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
ENSODEG00000005309	PRDM10	99	96.104	ENSPCOG00000023406	PRDM10	91	96.104	Propithecus_coquereli
ENSODEG00000005309	PRDM10	99	94.805	ENSPVAG00000012764	PRDM10	100	90.008	Pteropus_vampyrus
ENSODEG00000005309	PRDM10	100	91.197	ENSRNOG00000007853	Prdm10	100	91.197	Rattus_norvegicus
ENSODEG00000005309	PRDM10	97	96.429	ENSRBIG00000030924	PRDM10	100	90.847	Rhinopithecus_bieti
ENSODEG00000005309	PRDM10	99	93.506	ENSRROG00000034334	PRDM10	100	90.847	Rhinopithecus_roxellana
ENSODEG00000005309	PRDM10	97	98.214	ENSSBOG00000008773	PRDM10	100	90.678	Saimiri_boliviensis_boliviensis
ENSODEG00000005309	PRDM10	99	90.909	ENSSHAG00000004503	PRDM10	99	84.473	Sarcophilus_harrisii
ENSODEG00000005309	PRDM10	70	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSODEG00000005309	PRDM10	97	82.937	ENSSPUG00000001178	PRDM10	97	81.852	Sphenodon_punctatus
ENSODEG00000005309	PRDM10	99	94.805	ENSSSCG00000015243	PRDM10	100	91.051	Sus_scrofa
ENSODEG00000005309	PRDM10	99	83.730	ENSTGUG00000000530	PRDM10	100	80.591	Taeniopygia_guttata
ENSODEG00000005309	PRDM10	94	97.826	ENSTBEG00000007221	PRDM10	94	91.814	Tupaia_belangeri
ENSODEG00000005309	PRDM10	99	89.960	ENSTTRG00000009189	PRDM10	100	87.458	Tursiops_truncatus
ENSODEG00000005309	PRDM10	91	92.918	ENSUAMG00000018832	PRDM10	96	92.918	Ursus_americanus
ENSODEG00000005309	PRDM10	100	90.816	ENSUMAG00000003167	PRDM10	100	90.816	Ursus_maritimus
ENSODEG00000005309	PRDM10	97	100.000	ENSVVUG00000019878	PRDM10	100	90.059	Vulpes_vulpes
ENSODEG00000005309	PRDM10	99	71.897	ENSXETG00000032173	PRDM10	89	71.897	Xenopus_tropicalis