EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005373 (Gene tree)
Gene ID: 101574704
Gene Symbol: ARID4B
Alias: BCAA|BRCAA1|RBP1L1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 185871 bases
Position: chrJH651642.1:4692004-4877874
Accession: 101574704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007199	Tudor-knot	PF11717.8	5.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007310	ARID4B-202	3684	-	ENSODEP00000007200	1227 (aa)	XP_023556617	UPI000C9FB49C
ENSODET00000007309	ARID4B-201	5859	XM_004640833	ENSODEP00000007199	1313 (aa)	XP_004640890	UPI000333E758

Gene Model

Click here to download ENSODEG00000005373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005373	ARID4B	100	93.303	ENSG00000054267	ARID4B	100	96.894	Homo_sapiens
ENSODEG00000005373	ARID4B	99	53.015	ENSAPOG00000010823	tomm20a	100	51.722	Acanthochromis_polyacanthus
ENSODEG00000005373	ARID4B	99	92.003	ENSAMEG00000008801	ARID4B	100	92.003	Ailuropoda_melanoleuca
ENSODEG00000005373	ARID4B	87	73.544	ENSACIG00000006313	tomm20a	98	72.816	Amphilophus_citrinellus
ENSODEG00000005373	ARID4B	99	52.993	ENSAOCG00000003330	tomm20a	100	51.900	Amphiprion_ocellaris
ENSODEG00000005373	ARID4B	99	53.182	ENSAPEG00000024018	tomm20a	100	51.892	Amphiprion_percula
ENSODEG00000005373	ARID4B	100	76.564	ENSAPLG00000004422	ARID4B	100	76.714	Anas_platyrhynchos
ENSODEG00000005373	ARID4B	99	71.927	ENSACAG00000001289	ARID4B	100	72.838	Anolis_carolinensis
ENSODEG00000005373	ARID4B	100	92.624	ENSANAG00000038088	ARID4B	100	92.624	Aotus_nancymaae
ENSODEG00000005373	ARID4B	87	64.634	ENSACLG00000023521	tomm20a	98	64.634	Astatotilapia_calliptera
ENSODEG00000005373	ARID4B	72	89.333	ENSAMXG00000003657	tomm20a	87	66.667	Astyanax_mexicanus
ENSODEG00000005373	ARID4B	100	90.335	ENSBTAG00000000222	ARID4B	100	90.411	Bos_taurus
ENSODEG00000005373	ARID4B	100	92.161	ENSCJAG00000018055	ARID4B	100	91.857	Callithrix_jacchus
ENSODEG00000005373	ARID4B	100	91.933	ENSCAFG00000011439	ARID4B	100	92.085	Canis_familiaris
ENSODEG00000005373	ARID4B	99	91.577	ENSCAFG00020027130	ARID4B	99	91.730	Canis_lupus_dingo
ENSODEG00000005373	ARID4B	99	87.988	ENSCHIG00000020742	ARID4B	100	87.988	Capra_hircus
ENSODEG00000005373	ARID4B	100	93.151	ENSTSYG00000010028	ARID4B	100	92.466	Carlito_syrichta
ENSODEG00000005373	ARID4B	99	92.841	ENSCPOG00000034766	ARID4B	100	93.450	Cavia_porcellus
ENSODEG00000005373	ARID4B	100	92.548	ENSCCAG00000021520	ARID4B	100	92.548	Cebus_capucinus
ENSODEG00000005373	ARID4B	100	93.156	ENSCATG00000042166	ARID4B	100	92.928	Cercocebus_atys
ENSODEG00000005373	ARID4B	100	96.040	ENSCLAG00000003255	ARID4B	100	95.963	Chinchilla_lanigera
ENSODEG00000005373	ARID4B	100	93.080	ENSCSAG00000010069	ARID4B	100	93.156	Chlorocebus_sabaeus
ENSODEG00000005373	ARID4B	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
ENSODEG00000005373	ARID4B	100	76.795	ENSCPBG00000004501	ARID4B	100	77.022	Chrysemys_picta_bellii
ENSODEG00000005373	ARID4B	100	89.734	ENSCANG00000027498	ARID4B	100	84.401	Colobus_angolensis_palliatus
ENSODEG00000005373	ARID4B	100	89.362	ENSCGRG00001014397	Arid4b	100	89.894	Cricetulus_griseus_chok1gshd
ENSODEG00000005373	ARID4B	99	89.346	ENSCGRG00000004910	Arid4b	100	89.878	Cricetulus_griseus_crigri
ENSODEG00000005373	ARID4B	54	61.367	ENSCVAG00000003244	tomm20a	100	51.652	Cyprinodon_variegatus
ENSODEG00000005373	ARID4B	56	90.983	ENSDNOG00000005711	ARID4B	100	90.983	Dasypus_novemcinctus
ENSODEG00000005373	ARID4B	99	90.404	ENSDORG00000006422	Arid4b	100	90.632	Dipodomys_ordii
ENSODEG00000005373	ARID4B	90	89.453	ENSETEG00000005596	ARID4B	92	88.889	Echinops_telfairi
ENSODEG00000005373	ARID4B	99	91.159	ENSEASG00005000677	ARID4B	99	90.625	Equus_asinus_asinus
ENSODEG00000005373	ARID4B	99	92.454	ENSECAG00000017836	ARID4B	99	92.302	Equus_caballus
ENSODEG00000005373	ARID4B	83	91.667	ENSEEUG00000005378	ARID4B	86	91.667	Erinaceus_europaeus
ENSODEG00000005373	ARID4B	100	90.715	ENSFCAG00000030096	ARID4B	100	90.715	Felis_catus
ENSODEG00000005373	ARID4B	100	77.929	ENSFALG00000013548	ARID4B	98	79.063	Ficedula_albicollis
ENSODEG00000005373	ARID4B	99	94.432	ENSFDAG00000014194	ARID4B	100	94.050	Fukomys_damarensis
ENSODEG00000005373	ARID4B	99	51.994	ENSFHEG00000003798	tomm20a	100	51.702	Fundulus_heteroclitus
ENSODEG00000005373	ARID4B	90	54.545	ENSGMOG00000018747	tomm20a	92	52.308	Gadus_morhua
ENSODEG00000005373	ARID4B	99	52.932	ENSGACG00000004298	tomm20a	100	51.906	Gasterosteus_aculeatus
ENSODEG00000005373	ARID4B	100	75.359	ENSGAGG00000020544	ARID4B	94	81.197	Gopherus_agassizii
ENSODEG00000005373	ARID4B	100	93.531	ENSGGOG00000022080	ARID4B	100	92.998	Gorilla_gorilla
ENSODEG00000005373	ARID4B	100	94.068	ENSHGLG00000012546	ARID4B	100	94.144	Heterocephalus_glaber_female
ENSODEG00000005373	ARID4B	100	94.068	ENSHGLG00100015436	ARID4B	100	94.144	Heterocephalus_glaber_male
ENSODEG00000005373	ARID4B	87	73.850	ENSHCOG00000010376	tomm20a	95	74.029	Hippocampus_comes
ENSODEG00000005373	ARID4B	100	91.793	ENSSTOG00000002810	ARID4B	100	92.401	Ictidomys_tridecemlineatus
ENSODEG00000005373	ARID4B	100	86.225	ENSJJAG00000021368	Arid4b	100	86.606	Jaculus_jaculus
ENSODEG00000005373	ARID4B	87	54.265	ENSKMAG00000010987	tomm20a	98	52.370	Kryptolebias_marmoratus
ENSODEG00000005373	ARID4B	99	91.311	ENSLAFG00000014295	ARID4B	100	91.616	Loxodonta_africana
ENSODEG00000005373	ARID4B	100	93.004	ENSMFAG00000044016	ARID4B	100	93.080	Macaca_fascicularis
ENSODEG00000005373	ARID4B	100	93.004	ENSMMUG00000007141	ARID4B	100	93.080	Macaca_mulatta
ENSODEG00000005373	ARID4B	100	93.836	ENSMNEG00000014840	ARID4B	100	93.379	Macaca_nemestrina
ENSODEG00000005373	ARID4B	99	92.966	ENSMLEG00000033583	ARID4B	100	93.043	Mandrillus_leucophaeus
ENSODEG00000005373	ARID4B	94	50.389	ENSMAMG00000017134	tomm20a	99	50.582	Mastacembelus_armatus
ENSODEG00000005373	ARID4B	100	78.156	ENSMGAG00000011896	ARID4B	100	78.231	Meleagris_gallopavo
ENSODEG00000005373	ARID4B	100	92.711	ENSMICG00000016358	ARID4B	100	93.014	Microcebus_murinus
ENSODEG00000005373	ARID4B	87	75.787	ENSMMOG00000000561	tomm20a	95	74.757	Mola_mola
ENSODEG00000005373	ARID4B	100	82.903	ENSMODG00000008417	ARID4B	100	83.359	Monodelphis_domestica
ENSODEG00000005373	ARID4B	100	88.289	MGP_CAROLIEiJ_G0018236	Arid4b	100	88.745	Mus_caroli
ENSODEG00000005373	ARID4B	100	87.833	ENSMUSG00000039219	Arid4b	100	88.289	Mus_musculus
ENSODEG00000005373	ARID4B	100	88.441	MGP_PahariEiJ_G0019286	Arid4b	100	88.897	Mus_pahari
ENSODEG00000005373	ARID4B	100	87.681	MGP_SPRETEiJ_G0019094	Arid4b	100	88.137	Mus_spretus
ENSODEG00000005373	ARID4B	100	91.096	ENSMPUG00000002906	ARID4B	100	91.096	Mustela_putorius_furo
ENSODEG00000005373	ARID4B	99	90.038	ENSMLUG00000016232	ARID4B	100	89.734	Myotis_lucifugus
ENSODEG00000005373	ARID4B	100	88.502	ENSNGAG00000014629	Arid4b	100	88.427	Nannospalax_galili
ENSODEG00000005373	ARID4B	87	73.966	ENSNBRG00000019684	tomm20a	98	73.966	Neolamprologus_brichardi
ENSODEG00000005373	ARID4B	100	92.852	ENSNLEG00000002665	ARID4B	100	93.080	Nomascus_leucogenys
ENSODEG00000005373	ARID4B	99	92.460	ENSOCUG00000006605	ARID4B	100	92.079	Oryctolagus_cuniculus
ENSODEG00000005373	ARID4B	100	52.357	ENSORLG00000012510	tomm20a	100	51.988	Oryzias_latipes
ENSODEG00000005373	ARID4B	88	74.760	ENSORLG00020013988	tomm20a	72	74.458	Oryzias_latipes_hni
ENSODEG00000005373	ARID4B	88	75.362	ENSORLG00015022835	tomm20a	99	75.061	Oryzias_latipes_hsok
ENSODEG00000005373	ARID4B	100	52.475	ENSOMEG00000000521	tomm20a	54	61.202	Oryzias_melastigma
ENSODEG00000005373	ARID4B	99	82.602	ENSOGAG00000012476	ARID4B	100	81.338	Otolemur_garnettii
ENSODEG00000005373	ARID4B	99	89.169	ENSOARG00000003481	ARID4B	97	89.169	Ovis_aries
ENSODEG00000005373	ARID4B	100	93.836	ENSPPAG00000031651	ARID4B	100	93.379	Pan_paniscus
ENSODEG00000005373	ARID4B	100	90.868	ENSPPRG00000013739	ARID4B	100	90.868	Panthera_pardus
ENSODEG00000005373	ARID4B	100	88.813	ENSPTIG00000012520	ARID4B	100	88.813	Panthera_tigris_altaica
ENSODEG00000005373	ARID4B	85	92.986	ENSPTRG00000048786	-	95	92.446	Pan_troglodytes
ENSODEG00000005373	ARID4B	100	93.912	ENSPTRG00000002129	ARID4B	100	93.455	Pan_troglodytes
ENSODEG00000005373	ARID4B	99	92.460	ENSPANG00000013611	ARID4B	100	92.536	Papio_anubis
ENSODEG00000005373	ARID4B	93	76.275	ENSPSIG00000011632	ARID4B	99	76.418	Pelodiscus_sinensis
ENSODEG00000005373	ARID4B	93	91.863	ENSPCIG00000029756	ARID4B	100	82.903	Phascolarctos_cinereus
ENSODEG00000005373	ARID4B	99	51.683	ENSPFOG00000019430	tomm20a	100	51.804	Poecilia_formosa
ENSODEG00000005373	ARID4B	99	50.950	ENSPLAG00000010554	tomm20a	100	51.692	Poecilia_latipinna
ENSODEG00000005373	ARID4B	99	51.596	ENSPREG00000007996	tomm20a	100	52.792	Poecilia_reticulata
ENSODEG00000005373	ARID4B	100	93.912	ENSPPYG00000000098	ARID4B	100	93.455	Pongo_abelii
ENSODEG00000005373	ARID4B	100	92.553	ENSPCOG00000024328	ARID4B	100	92.553	Propithecus_coquereli
ENSODEG00000005373	ARID4B	100	87.814	ENSPVAG00000015159	ARID4B	100	87.586	Pteropus_vampyrus
ENSODEG00000005373	ARID4B	87	86.870	ENSRNOG00000016391	LOC100912163	97	86.957	Rattus_norvegicus
ENSODEG00000005373	ARID4B	99	85.605	ENSRBIG00000042029	ARID4B	100	85.149	Rhinopithecus_bieti
ENSODEG00000005373	ARID4B	100	92.928	ENSRROG00000045203	ARID4B	100	93.004	Rhinopithecus_roxellana
ENSODEG00000005373	ARID4B	83	91.308	ENSSBOG00000020196	ARID4B	100	91.308	Saimiri_boliviensis_boliviensis
ENSODEG00000005373	ARID4B	100	83.636	ENSSHAG00000015214	ARID4B	100	84.545	Sarcophilus_harrisii
ENSODEG00000005373	ARID4B	54	58.496	ENSSFOG00015000132	arid4b	54	58.356	Scleropages_formosus
ENSODEG00000005373	ARID4B	76	41.522	ENSSFOG00015008923	tomm20a	90	73.913	Scleropages_formosus
ENSODEG00000005373	ARID4B	99	51.655	ENSSMAG00000010430	tomm20a	100	51.682	Scophthalmus_maximus
ENSODEG00000005373	ARID4B	99	53.603	ENSSDUG00000003019	tomm20a	100	52.533	Seriola_dumerili
ENSODEG00000005373	ARID4B	100	76.493	ENSSPUG00000015466	ARID4B	98	76.000	Sphenodon_punctatus
ENSODEG00000005373	ARID4B	99	53.270	ENSSPAG00000007358	tomm20a	100	52.055	Stegastes_partitus
ENSODEG00000005373	ARID4B	100	90.868	ENSSSCG00000010156	ARID4B	100	91.020	Sus_scrofa
ENSODEG00000005373	ARID4B	100	78.191	ENSTGUG00000010246	ARID4B	100	78.875	Taeniopygia_guttata
ENSODEG00000005373	ARID4B	56	46.203	ENSTRUG00000002893	tomm20a	85	45.556	Takifugu_rubripes
ENSODEG00000005373	ARID4B	79	85.653	ENSTBEG00000003961	ARID4B	80	84.154	Tupaia_belangeri
ENSODEG00000005373	ARID4B	100	90.411	ENSTTRG00000002228	ARID4B	100	90.335	Tursiops_truncatus
ENSODEG00000005373	ARID4B	99	90.979	ENSUMAG00000006905	ARID4B	100	90.818	Ursus_maritimus
ENSODEG00000005373	ARID4B	69	93.467	ENSVPAG00000006841	ARID4B	69	93.467	Vicugna_pacos
ENSODEG00000005373	ARID4B	99	91.133	ENSVVUG00000008154	ARID4B	99	91.056	Vulpes_vulpes
ENSODEG00000005373	ARID4B	99	51.808	ENSXMAG00000006538	tomm20a	100	51.225	Xiphophorus_maculatus