EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005378 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 578 bases
Position: chrJH651637.1:543374-543951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007205	SUI1	PF01253.22	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007315	-	546	-	ENSODEP00000007205	181 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005378	-	98	83.163	ENSODEG00000009408	-	98	78.283
ENSODEG00000005378	-	100	63.402	ENSODEG00000006563	-	100	62.371

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005378	-	100	82.828	ENSG00000139726	DENR	100	78.788	Homo_sapiens
ENSODEG00000005378	-	84	81.290	ENSAPOG00000021065	denr	81	77.419	Acanthochromis_polyacanthus
ENSODEG00000005378	-	100	77.833	ENSAMEG00000014851	DENR	99	74.877	Ailuropoda_melanoleuca
ENSODEG00000005378	-	86	79.245	ENSACIG00000007705	denr	81	75.472	Amphilophus_citrinellus
ENSODEG00000005378	-	84	81.290	ENSAOCG00000004767	denr	81	77.419	Amphiprion_ocellaris
ENSODEG00000005378	-	84	81.290	ENSAPEG00000006323	denr	81	77.419	Amphiprion_percula
ENSODEG00000005378	-	86	78.616	ENSATEG00000004198	denr	81	74.843	Anabas_testudineus
ENSODEG00000005378	-	100	77.273	ENSAPLG00000003750	DENR	99	73.232	Anas_platyrhynchos
ENSODEG00000005378	-	97	78.238	ENSACAG00000016012	DENR	98	74.093	Anolis_carolinensis
ENSODEG00000005378	-	100	82.323	ENSANAG00000033479	-	100	78.283	Aotus_nancymaae
ENSODEG00000005378	-	100	70.681	ENSANAG00000011753	-	99	70.681	Aotus_nancymaae
ENSODEG00000005378	-	86	79.245	ENSACLG00000024786	denr	82	75.472	Astatotilapia_calliptera
ENSODEG00000005378	-	87	75.301	ENSAMXG00000019387	denr	87	78.182	Astyanax_mexicanus
ENSODEG00000005378	-	100	80.303	ENSBTAG00000049723	DENR	100	76.263	Bos_taurus
ENSODEG00000005378	-	100	80.303	ENSBTAG00000032433	DENR	100	76.263	Bos_taurus
ENSODEG00000005378	-	85	41.250	WBGene00012932	Y47D3A.21	82	41.772	Caenorhabditis_elegans
ENSODEG00000005378	-	100	87.097	ENSCJAG00000020488	DENR	100	82.796	Callithrix_jacchus
ENSODEG00000005378	-	76	68.387	ENSCJAG00000042372	-	95	63.226	Callithrix_jacchus
ENSODEG00000005378	-	100	81.313	ENSCAFG00000032380	DENR	72	81.313	Canis_familiaris
ENSODEG00000005378	-	100	81.313	ENSCAFG00020016334	DENR	100	77.273	Canis_lupus_dingo
ENSODEG00000005378	-	100	80.303	ENSCHIG00000025489	DENR	100	76.263	Capra_hircus
ENSODEG00000005378	-	100	83.333	ENSTSYG00000028003	-	100	79.293	Carlito_syrichta
ENSODEG00000005378	-	100	80.303	ENSTSYG00000035451	-	100	76.263	Carlito_syrichta
ENSODEG00000005378	-	87	89.441	ENSCAPG00000002873	DENR	99	84.472	Cavia_aperea
ENSODEG00000005378	-	100	84.343	ENSCPOG00000031356	DENR	100	80.303	Cavia_porcellus
ENSODEG00000005378	-	100	76.064	ENSCCAG00000026516	-	100	71.809	Cebus_capucinus
ENSODEG00000005378	-	99	65.625	ENSCCAG00000033248	-	99	65.104	Cebus_capucinus
ENSODEG00000005378	-	100	82.323	ENSCATG00000032375	-	100	78.283	Cercocebus_atys
ENSODEG00000005378	-	100	81.818	ENSCLAG00000014586	DENR	100	77.778	Chinchilla_lanigera
ENSODEG00000005378	-	82	92.105	ENSCSAG00000002095	DENR	100	86.842	Chlorocebus_sabaeus
ENSODEG00000005378	-	100	69.849	ENSCHOG00000011505	DENR	100	69.849	Choloepus_hoffmanni
ENSODEG00000005378	-	100	78.283	ENSCPBG00000026018	DENR	100	74.242	Chrysemys_picta_bellii
ENSODEG00000005378	-	87	50.314	ENSCING00000022096	-	80	50.314	Ciona_intestinalis
ENSODEG00000005378	-	87	46.541	ENSCSAVG00000008066	-	80	46.541	Ciona_savignyi
ENSODEG00000005378	-	100	79.293	ENSCGRG00001022427	Denr	100	75.253	Cricetulus_griseus_chok1gshd
ENSODEG00000005378	-	100	79.293	ENSCGRG00000014376	Denr	100	75.253	Cricetulus_griseus_crigri
ENSODEG00000005378	-	96	72.376	ENSCSEG00000012090	denr	93	69.061	Cynoglossus_semilaevis
ENSODEG00000005378	-	97	70.879	ENSCVAG00000006732	denr	94	72.527	Cyprinodon_variegatus
ENSODEG00000005378	-	87	72.254	ENSDARG00000037229	denr	83	73.410	Danio_rerio
ENSODEG00000005378	-	82	91.447	ENSDNOG00000001447	DENR	100	86.184	Dasypus_novemcinctus
ENSODEG00000005378	-	100	78.788	ENSDNOG00000036413	-	100	75.253	Dasypus_novemcinctus
ENSODEG00000005378	-	83	46.296	FBgn0030802	DENR	79	46.104	Drosophila_melanogaster
ENSODEG00000005378	-	100	68.367	ENSETEG00000013029	DENR	100	64.286	Echinops_telfairi
ENSODEG00000005378	-	100	81.313	ENSEASG00005012513	DENR	100	77.273	Equus_asinus_asinus
ENSODEG00000005378	-	100	81.313	ENSECAG00000021824	DENR	72	81.313	Equus_caballus
ENSODEG00000005378	-	97	66.667	ENSELUG00000002656	denr	97	66.667	Esox_lucius
ENSODEG00000005378	-	100	80.303	ENSFCAG00000006126	DENR	100	76.263	Felis_catus
ENSODEG00000005378	-	100	74.000	ENSFALG00000009235	DENR	100	75.500	Ficedula_albicollis
ENSODEG00000005378	-	100	78.378	ENSFDAG00000018403	-	100	74.586	Fukomys_damarensis
ENSODEG00000005378	-	100	84.343	ENSFDAG00000016899	-	100	80.303	Fukomys_damarensis
ENSODEG00000005378	-	87	78.125	ENSFHEG00000007729	denr	83	75.460	Fundulus_heteroclitus
ENSODEG00000005378	-	87	74.847	ENSGMOG00000017892	denr	82	71.166	Gadus_morhua
ENSODEG00000005378	-	100	77.273	ENSGALG00000003795	DENR	100	73.232	Gallus_gallus
ENSODEG00000005378	-	86	81.646	ENSGAFG00000004297	denr	80	81.646	Gambusia_affinis
ENSODEG00000005378	-	87	73.006	ENSGACG00000015614	denr	82	71.166	Gasterosteus_aculeatus
ENSODEG00000005378	-	100	78.283	ENSGAGG00000023819	DENR	100	74.242	Gopherus_agassizii
ENSODEG00000005378	-	100	82.828	ENSGGOG00000005562	DENR	100	78.788	Gorilla_gorilla
ENSODEG00000005378	-	86	79.245	ENSHBUG00000011606	denr	82	75.472	Haplochromis_burtoni
ENSODEG00000005378	-	100	84.343	ENSHGLG00000009606	DENR	100	80.303	Heterocephalus_glaber_female
ENSODEG00000005378	-	100	84.343	ENSHGLG00100019201	DENR	100	80.303	Heterocephalus_glaber_male
ENSODEG00000005378	-	84	80.000	ENSHCOG00000003310	denr	84	76.074	Hippocampus_comes
ENSODEG00000005378	-	90	75.926	ENSIPUG00000016199	denr	80	78.205	Ictalurus_punctatus
ENSODEG00000005378	-	100	82.143	ENSSTOG00000014128	DENR	100	78.061	Ictidomys_tridecemlineatus
ENSODEG00000005378	-	76	75.159	ENSJJAG00000013822	-	92	75.159	Jaculus_jaculus
ENSODEG00000005378	-	100	79.679	ENSJJAG00000008721	-	100	76.471	Jaculus_jaculus
ENSODEG00000005378	-	100	79.798	ENSJJAG00000012558	-	100	75.758	Jaculus_jaculus
ENSODEG00000005378	-	87	76.398	ENSKMAG00000008452	denr	83	74.534	Kryptolebias_marmoratus
ENSODEG00000005378	-	87	76.687	ENSLBEG00000021674	denr	82	76.687	Labrus_bergylta
ENSODEG00000005378	-	69	80.315	ENSLACG00000022178	DENR	96	80.315	Latimeria_chalumnae
ENSODEG00000005378	-	87	79.375	ENSLOCG00000005501	denr	81	81.250	Lepisosteus_oculatus
ENSODEG00000005378	-	100	78.500	ENSLAFG00000031728	DENR	100	75.500	Loxodonta_africana
ENSODEG00000005378	-	100	82.323	ENSMFAG00000038312	DENR	100	78.283	Macaca_fascicularis
ENSODEG00000005378	-	100	82.323	ENSMMUG00000046801	DENR	100	78.283	Macaca_mulatta
ENSODEG00000005378	-	77	69.333	ENSMNEG00000030944	-	99	62.434	Macaca_nemestrina
ENSODEG00000005378	-	100	82.323	ENSMNEG00000034844	-	100	78.283	Macaca_nemestrina
ENSODEG00000005378	-	100	82.323	ENSMLEG00000032214	DENR	100	78.283	Mandrillus_leucophaeus
ENSODEG00000005378	-	86	79.245	ENSMAMG00000011386	denr	81	75.472	Mastacembelus_armatus
ENSODEG00000005378	-	86	79.245	ENSMZEG00005007982	denr	82	75.472	Maylandia_zebra
ENSODEG00000005378	-	100	77.273	ENSMGAG00000003720	DENR	99	73.232	Meleagris_gallopavo
ENSODEG00000005378	-	100	75.269	ENSMAUG00000020940	Denr	100	74.731	Mesocricetus_auratus
ENSODEG00000005378	-	100	81.818	ENSMICG00000046263	DENR	100	77.778	Microcebus_murinus
ENSODEG00000005378	-	100	81.818	ENSMOCG00000019231	Denr	100	77.778	Microtus_ochrogaster
ENSODEG00000005378	-	86	79.874	ENSMMOG00000009357	denr	87	79.874	Mola_mola
ENSODEG00000005378	-	100	78.283	ENSMODG00000012302	DENR	100	74.242	Monodelphis_domestica
ENSODEG00000005378	-	87	78.750	ENSMALG00000018416	denr	82	75.000	Monopterus_albus
ENSODEG00000005378	-	100	81.313	MGP_CAROLIEiJ_G0027737	Denr	100	80.808	Mus_caroli
ENSODEG00000005378	-	100	81.313	ENSMUSG00000023106	Denr	100	80.808	Mus_musculus
ENSODEG00000005378	-	100	81.818	MGP_PahariEiJ_G0024317	Denr	100	81.313	Mus_pahari
ENSODEG00000005378	-	100	81.313	MGP_SPRETEiJ_G0028735	Denr	100	80.808	Mus_spretus
ENSODEG00000005378	-	100	78.500	ENSMPUG00000001826	DENR	73	77.500	Mustela_putorius_furo
ENSODEG00000005378	-	100	79.500	ENSMLUG00000002088	DENR	100	76.500	Myotis_lucifugus
ENSODEG00000005378	-	100	80.303	ENSNGAG00000013775	Denr	100	76.263	Nannospalax_galili
ENSODEG00000005378	-	87	79.375	ENSNBRG00000018898	denr	82	75.625	Neolamprologus_brichardi
ENSODEG00000005378	-	100	82.828	ENSNLEG00000029880	DENR	100	78.788	Nomascus_leucogenys
ENSODEG00000005378	-	87	77.914	ENSONIG00000015319	denr	82	74.233	Oreochromis_niloticus
ENSODEG00000005378	-	100	77.000	ENSOANG00000011417	-	100	74.000	Ornithorhynchus_anatinus
ENSODEG00000005378	-	96	71.429	ENSOCUG00000027291	-	100	67.725	Oryctolagus_cuniculus
ENSODEG00000005378	-	100	80.808	ENSOCUG00000008150	-	100	76.768	Oryctolagus_cuniculus
ENSODEG00000005378	-	96	72.316	ENSORLG00000001495	denr	83	77.419	Oryzias_latipes
ENSODEG00000005378	-	96	72.316	ENSORLG00020015485	denr	83	77.419	Oryzias_latipes_hni
ENSODEG00000005378	-	96	71.910	ENSORLG00015002890	denr	83	76.923	Oryzias_latipes_hsok
ENSODEG00000005378	-	84	79.355	ENSOMEG00000021836	denr	83	77.419	Oryzias_melastigma
ENSODEG00000005378	-	100	82.323	ENSOGAG00000012426	DENR	100	78.283	Otolemur_garnettii
ENSODEG00000005378	-	100	77.340	ENSOARG00000008511	DENR	99	74.384	Ovis_aries
ENSODEG00000005378	-	100	77.184	ENSPPAG00000031425	DENR	100	76.214	Pan_paniscus
ENSODEG00000005378	-	100	80.303	ENSPPRG00000009664	-	100	76.263	Panthera_pardus
ENSODEG00000005378	-	100	62.088	ENSPPRG00000020005	-	100	59.890	Panthera_pardus
ENSODEG00000005378	-	87	74.051	ENSPTIG00000021643	-	87	74.051	Panthera_tigris_altaica
ENSODEG00000005378	-	100	79.798	ENSPTIG00000014761	-	100	75.758	Panthera_tigris_altaica
ENSODEG00000005378	-	100	82.828	ENSPTRG00000005584	DENR	100	78.788	Pan_troglodytes
ENSODEG00000005378	-	87	90.062	ENSPANG00000035364	-	99	85.093	Papio_anubis
ENSODEG00000005378	-	100	82.323	ENSPANG00000030074	-	100	78.283	Papio_anubis
ENSODEG00000005378	-	87	79.375	ENSPKIG00000001107	denr	79	80.645	Paramormyrops_kingsleyae
ENSODEG00000005378	-	100	77.778	ENSPSIG00000008249	DENR	95	73.737	Pelodiscus_sinensis
ENSODEG00000005378	-	93	69.048	ENSPMGG00000017214	denr	72	69.048	Periophthalmus_magnuspinnatus
ENSODEG00000005378	-	100	81.818	ENSPEMG00000006521	-	100	77.778	Peromyscus_maniculatus_bairdii
ENSODEG00000005378	-	80	65.563	ENSPMAG00000008589	denr	79	65.563	Petromyzon_marinus
ENSODEG00000005378	-	100	78.788	ENSPCIG00000022523	DENR	100	74.747	Phascolarctos_cinereus
ENSODEG00000005378	-	87	80.625	ENSPFOG00000023419	denr	82	76.875	Poecilia_formosa
ENSODEG00000005378	-	87	80.625	ENSPLAG00000014807	denr	82	76.875	Poecilia_latipinna
ENSODEG00000005378	-	84	82.581	ENSPMEG00000020699	denr	77	82.581	Poecilia_mexicana
ENSODEG00000005378	-	87	80.625	ENSPREG00000016795	denr	82	76.875	Poecilia_reticulata
ENSODEG00000005378	-	100	80.000	ENSPCAG00000012039	DENR	100	75.897	Procavia_capensis
ENSODEG00000005378	-	100	81.818	ENSPCOG00000015933	DENR	100	77.778	Propithecus_coquereli
ENSODEG00000005378	-	100	80.402	ENSPVAG00000001291	DENR	100	76.382	Pteropus_vampyrus
ENSODEG00000005378	-	87	79.375	ENSPNYG00000003833	denr	82	75.625	Pundamilia_nyererei
ENSODEG00000005378	-	86	77.301	ENSPNAG00000021662	denr	82	77.301	Pygocentrus_nattereri
ENSODEG00000005378	-	100	78.283	ENSRNOG00000001106	Denr	100	75.253	Rattus_norvegicus
ENSODEG00000005378	-	100	61.856	ENSRBIG00000041357	DENR	100	63.402	Rhinopithecus_bieti
ENSODEG00000005378	-	100	82.323	ENSRROG00000044446	DENR	100	78.283	Rhinopithecus_roxellana
ENSODEG00000005378	-	76	77.273	ENSSBOG00000030149	-	87	72.078	Saimiri_boliviensis_boliviensis
ENSODEG00000005378	-	91	59.538	ENSSBOG00000024171	-	99	57.219	Saimiri_boliviensis_boliviensis
ENSODEG00000005378	-	99	75.879	ENSSHAG00000012064	DENR	100	72.864	Sarcophilus_harrisii
ENSODEG00000005378	-	87	81.250	ENSSFOG00015018494	denr	81	77.500	Scleropages_formosus
ENSODEG00000005378	-	92	75.000	ENSSMAG00000010563	denr	96	67.742	Scophthalmus_maximus
ENSODEG00000005378	-	97	72.626	ENSSDUG00000023551	denr	94	69.274	Seriola_dumerili
ENSODEG00000005378	-	87	76.687	ENSSLDG00000011430	denr	82	73.006	Seriola_lalandi_dorsalis
ENSODEG00000005378	-	84	92.308	ENSSARG00000004446	DENR	100	87.179	Sorex_araneus
ENSODEG00000005378	-	100	78.283	ENSSPUG00000012205	DENR	100	74.242	Sphenodon_punctatus
ENSODEG00000005378	-	97	73.184	ENSSPAG00000019529	denr	94	69.832	Stegastes_partitus
ENSODEG00000005378	-	100	80.808	ENSSSCG00000009788	-	100	76.768	Sus_scrofa
ENSODEG00000005378	-	100	73.737	ENSTGUG00000005674	DENR	100	74.490	Taeniopygia_guttata
ENSODEG00000005378	-	86	80.503	ENSTRUG00000020621	denr	86	80.503	Takifugu_rubripes
ENSODEG00000005378	-	87	78.750	ENSTNIG00000013510	denr	81	78.750	Tetraodon_nigroviridis
ENSODEG00000005378	-	100	65.829	ENSTTRG00000015856	DENR	100	63.317	Tursiops_truncatus
ENSODEG00000005378	-	99	53.191	ENSUAMG00000011200	-	99	50.000	Ursus_americanus
ENSODEG00000005378	-	100	80.808	ENSUAMG00000003667	-	100	76.768	Ursus_americanus
ENSODEG00000005378	-	100	80.808	ENSUMAG00000005166	-	100	76.768	Ursus_maritimus
ENSODEG00000005378	-	99	53.191	ENSUMAG00000023866	-	99	50.000	Ursus_maritimus
ENSODEG00000005378	-	100	68.557	ENSVPAG00000011472	DENR	100	64.433	Vicugna_pacos
ENSODEG00000005378	-	100	81.313	ENSVVUG00000028097	DENR	72	81.313	Vulpes_vulpes
ENSODEG00000005378	-	100	73.737	ENSXETG00000005791	denr	99	69.697	Xenopus_tropicalis
ENSODEG00000005378	-	86	81.761	ENSXCOG00000017611	denr	86	77.987	Xiphophorus_couchianus
ENSODEG00000005378	-	87	81.250	ENSXMAG00000019247	denr	82	77.500	Xiphophorus_maculatus