EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005429 (Gene tree)
Gene ID: 101563300
Gene Symbol: GATB
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 84301 bases
Position: chrJH651616.1:4250656-4334956
Accession: 101563300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007270	GatB_Yqey	PF02637.18	1.7e-40	1	1
ENSODEP00000007271	GatB_Yqey	PF02637.18	4.5e-29	1	1
ENSODEP00000007272	GatB_Yqey	PF02637.18	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007382	GATB-202	1638	-	ENSODEP00000007271	545 (aa)	-	-
ENSODET00000007383	GATB-203	1419	-	ENSODEP00000007272	472 (aa)	-	-
ENSODET00000007381	GATB-201	1671	XM_004638720	ENSODEP00000007270	556 (aa)	XP_004638777	UPI000333F9D8

Gene Model

Click here to download ENSODEG00000005429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005429	GATB	99	86.383	ENSG00000059691	GATB	96	88.235	Homo_sapiens
ENSODEG00000005429	GATB	88	68.825	ENSAPOG00000022676	gatb	92	63.817	Acanthochromis_polyacanthus
ENSODEG00000005429	GATB	99	82.241	ENSAMEG00000018434	GATB	99	80.935	Ailuropoda_melanoleuca
ENSODEG00000005429	GATB	74	68.946	ENSACIG00000015827	gatb	100	62.471	Amphilophus_citrinellus
ENSODEG00000005429	GATB	87	69.830	ENSAOCG00000009635	gatb	95	64.588	Amphiprion_ocellaris
ENSODEG00000005429	GATB	87	66.667	ENSAPEG00000023666	gatb	94	61.972	Amphiprion_percula
ENSODEG00000005429	GATB	93	66.213	ENSATEG00000011821	gatb	94	64.009	Anabas_testudineus
ENSODEG00000005429	GATB	86	78.186	ENSAPLG00000003933	GATB	99	73.931	Anas_platyrhynchos
ENSODEG00000005429	GATB	99	70.064	ENSACAG00000002772	GATB	100	67.325	Anolis_carolinensis
ENSODEG00000005429	GATB	99	84.894	ENSANAG00000020953	GATB	99	83.906	Aotus_nancymaae
ENSODEG00000005429	GATB	78	68.022	ENSACLG00000026091	gatb	92	62.582	Astatotilapia_calliptera
ENSODEG00000005429	GATB	83	67.005	ENSAMXG00000021662	gatb	89	59.920	Astyanax_mexicanus
ENSODEG00000005429	GATB	99	82.979	ENSBTAG00000013914	GATB	99	81.555	Bos_taurus
ENSODEG00000005429	GATB	99	85.745	ENSCJAG00000002147	GATB	99	84.629	Callithrix_jacchus
ENSODEG00000005429	GATB	99	82.128	ENSCAFG00000008088	GATB	99	80.651	Canis_familiaris
ENSODEG00000005429	GATB	99	81.702	ENSCAFG00020026686	GATB	98	81.741	Canis_lupus_dingo
ENSODEG00000005429	GATB	99	83.617	ENSCHIG00000020111	GATB	99	82.098	Capra_hircus
ENSODEG00000005429	GATB	99	87.021	ENSTSYG00000009976	GATB	99	85.533	Carlito_syrichta
ENSODEG00000005429	GATB	100	77.158	ENSCAPG00000010977	GATB	100	77.158	Cavia_aperea
ENSODEG00000005429	GATB	100	87.950	ENSCPOG00000005023	GATB	100	87.950	Cavia_porcellus
ENSODEG00000005429	GATB	99	85.532	ENSCCAG00000021445	GATB	95	85.563	Cebus_capucinus
ENSODEG00000005429	GATB	99	87.021	ENSCATG00000034281	GATB	99	85.353	Cercocebus_atys
ENSODEG00000005429	GATB	100	91.949	ENSCLAG00000005772	GATB	100	91.949	Chinchilla_lanigera
ENSODEG00000005429	GATB	99	87.021	ENSCSAG00000003318	GATB	99	85.533	Chlorocebus_sabaeus
ENSODEG00000005429	GATB	99	82.766	ENSCHOG00000008476	GATB	99	80.289	Choloepus_hoffmanni
ENSODEG00000005429	GATB	99	69.767	ENSCPBG00000025824	GATB	99	67.626	Chrysemys_picta_bellii
ENSODEG00000005429	GATB	99	87.234	ENSCANG00000029227	GATB	99	85.533	Colobus_angolensis_palliatus
ENSODEG00000005429	GATB	100	85.169	ENSCGRG00001024051	GATB	100	85.169	Cricetulus_griseus_chok1gshd
ENSODEG00000005429	GATB	100	85.169	ENSCGRG00000012974	GATB	100	85.169	Cricetulus_griseus_crigri
ENSODEG00000005429	GATB	92	66.743	ENSCSEG00000004009	gatb	100	59.954	Cynoglossus_semilaevis
ENSODEG00000005429	GATB	87	69.830	ENSCVAG00000017180	gatb	99	64.990	Cyprinodon_variegatus
ENSODEG00000005429	GATB	87	71.951	ENSDARG00000037309	gatb	89	65.992	Danio_rerio
ENSODEG00000005429	GATB	99	81.780	ENSDNOG00000012683	GATB	99	80.180	Dasypus_novemcinctus
ENSODEG00000005429	GATB	99	84.289	ENSDORG00000010241	Gatb	99	83.993	Dipodomys_ordii
ENSODEG00000005429	GATB	87	50.971	FBgn0039153	GatB	95	45.547	Drosophila_melanogaster
ENSODEG00000005429	GATB	99	61.413	ENSETEG00000002356	GATB	99	61.413	Echinops_telfairi
ENSODEG00000005429	GATB	99	84.468	ENSEASG00005015868	GATB	99	83.363	Equus_asinus_asinus
ENSODEG00000005429	GATB	99	82.553	ENSECAG00000003539	GATB	99	81.736	Equus_caballus
ENSODEG00000005429	GATB	85	70.256	ENSEEUG00000002311	GATB	85	70.256	Erinaceus_europaeus
ENSODEG00000005429	GATB	93	66.210	ENSELUG00000013584	gatb	100	61.641	Esox_lucius
ENSODEG00000005429	GATB	99	83.404	ENSFCAG00000003207	GATB	99	81.555	Felis_catus
ENSODEG00000005429	GATB	76	75.900	ENSFALG00000002209	GATB	99	70.495	Ficedula_albicollis
ENSODEG00000005429	GATB	100	87.712	ENSFDAG00000006426	GATB	100	87.712	Fukomys_damarensis
ENSODEG00000005429	GATB	87	70.073	ENSFHEG00000008643	GATB	91	64.386	Fundulus_heteroclitus
ENSODEG00000005429	GATB	86	70.690	ENSGMOG00000001575	gatb	100	64.837	Gadus_morhua
ENSODEG00000005429	GATB	98	69.631	ENSGALG00000010097	GATB	99	68.015	Gallus_gallus
ENSODEG00000005429	GATB	90	68.075	ENSGAFG00000014422	gatb	92	64.407	Gambusia_affinis
ENSODEG00000005429	GATB	86	68.719	ENSGACG00000017143	gatb	99	63.730	Gasterosteus_aculeatus
ENSODEG00000005429	GATB	99	70.190	ENSGAGG00000007826	GATB	99	67.986	Gopherus_agassizii
ENSODEG00000005429	GATB	99	86.596	ENSGGOG00000011099	GATB	99	84.629	Gorilla_gorilla
ENSODEG00000005429	GATB	88	69.378	ENSHBUG00000009656	gatb	90	65.253	Haplochromis_burtoni
ENSODEG00000005429	GATB	99	88.723	ENSHGLG00000001316	GATB	100	88.559	Heterocephalus_glaber_female
ENSODEG00000005429	GATB	100	88.559	ENSHGLG00100004289	GATB	100	88.559	Heterocephalus_glaber_male
ENSODEG00000005429	GATB	87	68.293	ENSHCOG00000006270	gatb	89	63.618	Hippocampus_comes
ENSODEG00000005429	GATB	87	69.976	ENSIPUG00000013560	gatb	90	65.121	Ictalurus_punctatus
ENSODEG00000005429	GATB	99	84.468	ENSSTOG00000005689	GATB	99	83.183	Ictidomys_tridecemlineatus
ENSODEG00000005429	GATB	99	82.979	ENSJJAG00000016979	Gatb	99	82.979	Jaculus_jaculus
ENSODEG00000005429	GATB	88	70.264	ENSKMAG00000004727	gatb	92	65.408	Kryptolebias_marmoratus
ENSODEG00000005429	GATB	87	70.073	ENSLBEG00000019511	gatb	91	64.588	Labrus_bergylta
ENSODEG00000005429	GATB	87	66.259	ENSLACG00000004352	GATB	96	64.155	Latimeria_chalumnae
ENSODEG00000005429	GATB	86	62.530	ENSLOCG00000008564	gatb	89	59.036	Lepisosteus_oculatus
ENSODEG00000005429	GATB	100	82.226	ENSLAFG00000022607	GATB	100	82.226	Loxodonta_africana
ENSODEG00000005429	GATB	99	87.447	ENSMMUG00000011048	GATB	99	85.895	Macaca_mulatta
ENSODEG00000005429	GATB	99	87.447	ENSMNEG00000040147	GATB	99	85.895	Macaca_nemestrina
ENSODEG00000005429	GATB	99	87.234	ENSMLEG00000042135	GATB	99	85.714	Mandrillus_leucophaeus
ENSODEG00000005429	GATB	92	67.206	ENSMAMG00000013256	gatb	95	62.620	Mastacembelus_armatus
ENSODEG00000005429	GATB	88	69.378	ENSMZEG00005008495	gatb	92	64.484	Maylandia_zebra
ENSODEG00000005429	GATB	86	77.451	ENSMGAG00000004276	GATB	97	74.134	Meleagris_gallopavo
ENSODEG00000005429	GATB	100	84.958	ENSMAUG00000019099	Gatb	100	84.958	Mesocricetus_auratus
ENSODEG00000005429	GATB	99	84.681	ENSMICG00000004311	GATB	98	83.725	Microcebus_murinus
ENSODEG00000005429	GATB	100	84.958	ENSMOCG00000017566	Gatb	100	84.958	Microtus_ochrogaster
ENSODEG00000005429	GATB	94	53.113	ENSMMOG00000005376	gatb	87	55.936	Mola_mola
ENSODEG00000005429	GATB	99	75.157	ENSMODG00000001031	GATB	99	72.242	Monodelphis_domestica
ENSODEG00000005429	GATB	87	69.830	ENSMALG00000003418	gatb	90	65.870	Monopterus_albus
ENSODEG00000005429	GATB	100	84.958	MGP_CAROLIEiJ_G0025120	Gatb	100	84.958	Mus_caroli
ENSODEG00000005429	GATB	100	85.169	ENSMUSG00000028085	Gatb	100	85.169	Mus_musculus
ENSODEG00000005429	GATB	100	85.381	MGP_PahariEiJ_G0026563	Gatb	100	85.381	Mus_pahari
ENSODEG00000005429	GATB	99	84.894	MGP_SPRETEiJ_G0026062	Gatb	99	83.725	Mus_spretus
ENSODEG00000005429	GATB	99	82.340	ENSMPUG00000007394	GATB	99	81.555	Mustela_putorius_furo
ENSODEG00000005429	GATB	99	83.830	ENSMLUG00000008194	GATB	99	82.821	Myotis_lucifugus
ENSODEG00000005429	GATB	100	84.746	ENSNGAG00000002152	Gatb	100	84.746	Nannospalax_galili
ENSODEG00000005429	GATB	74	68.376	ENSNBRG00000005947	gatb	100	62.642	Neolamprologus_brichardi
ENSODEG00000005429	GATB	99	86.596	ENSNLEG00000005836	GATB	99	84.448	Nomascus_leucogenys
ENSODEG00000005429	GATB	87	79.805	ENSMEUG00000001479	GATB	99	75.506	Notamacropus_eugenii
ENSODEG00000005429	GATB	99	82.766	ENSOPRG00000011496	GATB	99	81.193	Ochotona_princeps
ENSODEG00000005429	GATB	88	69.617	ENSONIG00000010059	gatb	92	64.484	Oreochromis_niloticus
ENSODEG00000005429	GATB	74	79.714	ENSOANG00000005282	GATB	99	75.058	Ornithorhynchus_anatinus
ENSODEG00000005429	GATB	99	82.766	ENSOCUG00000016875	GATB	99	81.374	Oryctolagus_cuniculus
ENSODEG00000005429	GATB	87	67.640	ENSORLG00000007740	gatb	99	63.692	Oryzias_latipes
ENSODEG00000005429	GATB	89	68.000	ENSORLG00020016385	gatb	93	63.725	Oryzias_latipes_hni
ENSODEG00000005429	GATB	87	69.343	ENSOMEG00000003089	gatb	91	64.516	Oryzias_melastigma
ENSODEG00000005429	GATB	99	82.979	ENSOGAG00000014181	GATB	99	82.098	Otolemur_garnettii
ENSODEG00000005429	GATB	99	82.979	ENSOARG00000004355	GATB	99	80.755	Ovis_aries
ENSODEG00000005429	GATB	99	86.596	ENSPPAG00000041690	GATB	99	84.810	Pan_paniscus
ENSODEG00000005429	GATB	99	82.766	ENSPPRG00000004993	GATB	99	80.832	Panthera_pardus
ENSODEG00000005429	GATB	99	83.191	ENSPTIG00000021433	GATB	99	81.555	Panthera_tigris_altaica
ENSODEG00000005429	GATB	99	82.378	ENSPTRG00000016513	GATB	99	81.227	Pan_troglodytes
ENSODEG00000005429	GATB	99	84.255	ENSPANG00000024036	GATB	99	83.183	Papio_anubis
ENSODEG00000005429	GATB	88	70.024	ENSPKIG00000017076	gatb	98	64.567	Paramormyrops_kingsleyae
ENSODEG00000005429	GATB	97	69.717	ENSPSIG00000017832	GATB	97	67.159	Pelodiscus_sinensis
ENSODEG00000005429	GATB	87	59.124	ENSPMGG00000016497	gatb	89	55.936	Periophthalmus_magnuspinnatus
ENSODEG00000005429	GATB	100	83.263	ENSPEMG00000011096	Gatb	100	83.263	Peromyscus_maniculatus_bairdii
ENSODEG00000005429	GATB	99	76.170	ENSPCIG00000015213	GATB	99	72.694	Phascolarctos_cinereus
ENSODEG00000005429	GATB	87	69.807	ENSPFOG00000009933	gatb	91	65.000	Poecilia_formosa
ENSODEG00000005429	GATB	87	70.560	ENSPLAG00000015569	gatb	94	63.581	Poecilia_latipinna
ENSODEG00000005429	GATB	87	69.586	ENSPMEG00000006100	gatb	94	62.374	Poecilia_mexicana
ENSODEG00000005429	GATB	87	69.830	ENSPREG00000000128	gatb	94	62.325	Poecilia_reticulata
ENSODEG00000005429	GATB	99	86.809	ENSPPYG00000015121	GATB	99	84.810	Pongo_abelii
ENSODEG00000005429	GATB	99	64.376	ENSPCAG00000005950	GATB	99	64.376	Procavia_capensis
ENSODEG00000005429	GATB	96	86.813	ENSPCOG00000021777	GATB	98	85.316	Propithecus_coquereli
ENSODEG00000005429	GATB	99	82.979	ENSPVAG00000006891	GATB	99	82.278	Pteropus_vampyrus
ENSODEG00000005429	GATB	88	69.378	ENSPNYG00000013884	gatb	92	64.484	Pundamilia_nyererei
ENSODEG00000005429	GATB	86	68.395	ENSPNAG00000020150	gatb	89	63.618	Pygocentrus_nattereri
ENSODEG00000005429	GATB	99	83.191	ENSRNOG00000037655	Gatb	99	81.917	Rattus_norvegicus
ENSODEG00000005429	GATB	99	87.872	ENSRBIG00000006453	GATB	99	86.257	Rhinopithecus_bieti
ENSODEG00000005429	GATB	99	87.872	ENSRROG00000041575	GATB	99	86.257	Rhinopithecus_roxellana
ENSODEG00000005429	GATB	86	32.644	YBL080C	-	69	33.417	Saccharomyces_cerevisiae
ENSODEG00000005429	GATB	99	84.894	ENSSBOG00000022495	GATB	99	83.725	Saimiri_boliviensis_boliviensis
ENSODEG00000005429	GATB	99	74.788	ENSSHAG00000011763	GATB	99	71.892	Sarcophilus_harrisii
ENSODEG00000005429	GATB	90	69.860	ENSSFOG00015015565	gatb	92	66.145	Scleropages_formosus
ENSODEG00000005429	GATB	93	66.366	ENSSMAG00000003609	gatb	73	61.626	Scophthalmus_maximus
ENSODEG00000005429	GATB	93	68.337	ENSSDUG00000019847	gatb	93	63.532	Seriola_dumerili
ENSODEG00000005429	GATB	87	70.316	ENSSLDG00000010253	gatb	95	65.112	Seriola_lalandi_dorsalis
ENSODEG00000005429	GATB	75	70.448	ENSSARG00000003212	GATB	75	70.448	Sorex_araneus
ENSODEG00000005429	GATB	86	75.490	ENSSPUG00000014453	GATB	98	70.276	Sphenodon_punctatus
ENSODEG00000005429	GATB	87	69.830	ENSSPAG00000014465	gatb	99	64.789	Stegastes_partitus
ENSODEG00000005429	GATB	99	82.128	ENSSSCG00000009015	GATB	99	81.293	Sus_scrofa
ENSODEG00000005429	GATB	86	78.922	ENSTGUG00000004986	GATB	99	73.523	Taeniopygia_guttata
ENSODEG00000005429	GATB	83	66.158	ENSTRUG00000015238	gatb	92	58.777	Takifugu_rubripes
ENSODEG00000005429	GATB	73	61.425	ENSTNIG00000003378	gatb	99	61.425	Tetraodon_nigroviridis
ENSODEG00000005429	GATB	87	63.504	ENSTBEG00000009804	GATB	88	62.818	Tupaia_belangeri
ENSODEG00000005429	GATB	99	82.766	ENSTTRG00000010679	GATB	99	81.555	Tursiops_truncatus
ENSODEG00000005429	GATB	99	83.617	ENSUAMG00000021441	GATB	99	81.736	Ursus_americanus
ENSODEG00000005429	GATB	99	83.617	ENSUMAG00000016157	GATB	99	81.374	Ursus_maritimus
ENSODEG00000005429	GATB	80	73.731	ENSVPAG00000010844	GATB	80	73.731	Vicugna_pacos
ENSODEG00000005429	GATB	99	82.766	ENSVVUG00000025083	GATB	99	81.193	Vulpes_vulpes
ENSODEG00000005429	GATB	85	72.886	ENSXETG00000034167	GATB	97	69.043	Xenopus_tropicalis
ENSODEG00000005429	GATB	89	69.121	ENSXMAG00000008071	gatb	92	75.460	Xiphophorus_maculatus