EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005443 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 50300 bases
Position: chrJH651626.1:3761407-3811706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007288	TUDOR	PF00567.24	1.9e-48	1	3
ENSODEP00000007288	TUDOR	PF00567.24	1.9e-48	2	3
ENSODEP00000007288	TUDOR	PF00567.24	1.9e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007399	-	1749	-	ENSODEP00000007288	582 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005443	-	100	74.132	ENSG00000132972	RNF17	100	74.132	Homo_sapiens
ENSODEG00000005443	-	100	70.326	ENSAMEG00000017340	RNF17	54	69.881	Ailuropoda_melanoleuca
ENSODEG00000005443	-	100	44.196	ENSAPLG00000003969	RNF17	56	44.196	Anas_platyrhynchos
ENSODEG00000005443	-	99	41.729	ENSACAG00000001418	RNF17	51	41.729	Anolis_carolinensis
ENSODEG00000005443	-	95	66.047	ENSANAG00000029969	RNF17	95	66.214	Aotus_nancymaae
ENSODEG00000005443	-	100	75.633	ENSBTAG00000000278	RNF17	100	75.633	Bos_taurus
ENSODEG00000005443	-	100	73.101	ENSCJAG00000018937	RNF17	100	73.460	Callithrix_jacchus
ENSODEG00000005443	-	95	85.294	ENSCAFG00000007418	RNF17	51	85.294	Canis_familiaris
ENSODEG00000005443	-	100	76.737	ENSCAFG00020002919	-	100	77.221	Canis_lupus_dingo
ENSODEG00000005443	-	100	74.724	ENSCHIG00000026716	RNF17	100	74.724	Capra_hircus
ENSODEG00000005443	-	100	72.881	ENSTSYG00000000365	RNF17	99	69.764	Carlito_syrichta
ENSODEG00000005443	-	100	60.932	ENSCAPG00000012908	RNF17	59	60.932	Cavia_aperea
ENSODEG00000005443	-	100	74.132	ENSCCAG00000026725	RNF17	99	74.132	Cebus_capucinus
ENSODEG00000005443	-	100	75.641	ENSCATG00000040352	RNF17	100	74.448	Cercocebus_atys
ENSODEG00000005443	-	100	76.084	ENSCLAG00000004127	RNF17	53	76.084	Chinchilla_lanigera
ENSODEG00000005443	-	100	81.780	ENSCSAG00000018019	RNF17	50	81.780	Chlorocebus_sabaeus
ENSODEG00000005443	-	100	65.532	ENSCPBG00000020920	RNF17	53	65.532	Chrysemys_picta_bellii
ENSODEG00000005443	-	99	75.602	ENSCANG00000032927	RNF17	99	74.367	Colobus_angolensis_palliatus
ENSODEG00000005443	-	100	70.553	ENSCGRG00001022658	Rnf17	51	70.553	Cricetulus_griseus_chok1gshd
ENSODEG00000005443	-	100	70.553	ENSCGRG00000009924	Rnf17	51	70.553	Cricetulus_griseus_crigri
ENSODEG00000005443	-	100	76.252	ENSEASG00005001421	-	100	76.252	Equus_asinus_asinus
ENSODEG00000005443	-	100	83.898	ENSECAG00000017152	RNF17	50	83.898	Equus_caballus
ENSODEG00000005443	-	100	86.017	ENSFCAG00000004914	RNF17	100	76.545	Felis_catus
ENSODEG00000005443	-	100	44.785	ENSFALG00000008766	RNF17	53	44.785	Ficedula_albicollis
ENSODEG00000005443	-	100	43.930	ENSGALG00000045414	-	100	44.462	Gallus_gallus
ENSODEG00000005443	-	100	74.606	ENSGGOG00000014491	RNF17	100	74.606	Gorilla_gorilla
ENSODEG00000005443	-	100	70.840	ENSSTOG00000011255	-	100	70.840	Ictidomys_tridecemlineatus
ENSODEG00000005443	-	99	46.094	ENSLACG00000000323	RNF17	58	46.094	Latimeria_chalumnae
ENSODEG00000005443	-	100	75.641	ENSMFAG00000032388	RNF17	100	74.448	Macaca_fascicularis
ENSODEG00000005443	-	100	74.290	ENSMMUG00000014610	RNF17	100	74.290	Macaca_mulatta
ENSODEG00000005443	-	100	75.481	ENSMNEG00000011234	RNF17	100	75.481	Macaca_nemestrina
ENSODEG00000005443	-	100	75.641	ENSMLEG00000030227	RNF17	56	75.641	Mandrillus_leucophaeus
ENSODEG00000005443	-	100	80.932	ENSMAUG00000004788	Rnf17	51	69.208	Mesocricetus_auratus
ENSODEG00000005443	-	100	76.741	ENSMICG00000010364	RNF17	100	76.899	Microcebus_murinus
ENSODEG00000005443	-	100	68.263	ENSMOCG00000011818	-	77	68.263	Microtus_ochrogaster
ENSODEG00000005443	-	100	70.105	MGP_CAROLIEiJ_G0019337	Rnf17	53	70.105	Mus_caroli
ENSODEG00000005443	-	100	70.105	ENSMUSG00000000365	Rnf17	53	70.105	Mus_musculus
ENSODEG00000005443	-	100	70.852	MGP_PahariEiJ_G0030355	Rnf17	53	70.852	Mus_pahari
ENSODEG00000005443	-	100	69.955	MGP_SPRETEiJ_G0020228	Rnf17	53	69.955	Mus_spretus
ENSODEG00000005443	-	100	85.169	ENSMPUG00000013305	RNF17	54	70.597	Mustela_putorius_furo
ENSODEG00000005443	-	100	68.311	ENSNGAG00000013553	Rnf17	52	68.311	Nannospalax_galili
ENSODEG00000005443	-	97	32.866	ENSNBRG00000012006	rnf17	68	32.087	Neolamprologus_brichardi
ENSODEG00000005443	-	100	74.209	ENSNLEG00000013780	RNF17	100	74.209	Nomascus_leucogenys
ENSODEG00000005443	-	97	31.715	ENSONIG00000015746	rnf17	54	31.515	Oreochromis_niloticus
ENSODEG00000005443	-	97	32.308	ENSORLG00000012818	rnf17	56	32.470	Oryzias_latipes
ENSODEG00000005443	-	97	32.308	ENSORLG00020009879	-	50	32.829	Oryzias_latipes_hni
ENSODEG00000005443	-	97	32.308	ENSORLG00015013027	-	50	32.470	Oryzias_latipes_hsok
ENSODEG00000005443	-	88	30.466	ENSOMEG00000009891	rnf17	66	30.645	Oryzias_melastigma
ENSODEG00000005443	-	100	70.641	ENSOGAG00000014803	RNF17	50	70.641	Otolemur_garnettii
ENSODEG00000005443	-	100	70.448	ENSOARG00000014641	RNF17	51	70.448	Ovis_aries
ENSODEG00000005443	-	100	74.250	ENSPPAG00000028779	RNF17	100	74.250	Pan_paniscus
ENSODEG00000005443	-	100	85.169	ENSPPRG00000009230	RNF17	100	76.387	Panthera_pardus
ENSODEG00000005443	-	100	85.169	ENSPTIG00000001738	RNF17	100	76.545	Panthera_tigris_altaica
ENSODEG00000005443	-	100	74.092	ENSPTRG00000005713	RNF17	100	74.092	Pan_troglodytes
ENSODEG00000005443	-	100	74.448	ENSPANG00000007640	RNF17	100	74.448	Papio_anubis
ENSODEG00000005443	-	100	51.929	ENSPSIG00000011245	RNF17	76	48.299	Pelodiscus_sinensis
ENSODEG00000005443	-	100	70.105	ENSPEMG00000008693	Rnf17	52	70.105	Peromyscus_maniculatus_bairdii
ENSODEG00000005443	-	100	69.185	ENSPPYG00000005215	RNF17	52	69.185	Pongo_abelii
ENSODEG00000005443	-	100	60.855	ENSPCOG00000020211	RNF17	100	61.020	Propithecus_coquereli
ENSODEG00000005443	-	100	71.300	ENSRNOG00000008059	Rnf17	53	71.300	Rattus_norvegicus
ENSODEG00000005443	-	100	74.960	ENSRBIG00000027010	RNF17	56	74.960	Rhinopithecus_bieti
ENSODEG00000005443	-	100	73.776	ENSRROG00000022801	RNF17	100	73.776	Rhinopithecus_roxellana
ENSODEG00000005443	-	100	74.921	ENSSBOG00000021661	RNF17	99	74.921	Saimiri_boliviensis_boliviensis
ENSODEG00000005443	-	98	48.018	ENSSPUG00000008917	RNF17	56	48.018	Sphenodon_punctatus
ENSODEG00000005443	-	100	67.313	ENSSSCG00000009572	RNF17	50	66.766	Sus_scrofa
ENSODEG00000005443	-	66	51.196	ENSTGUG00000011272	-	100	51.196	Taeniopygia_guttata
ENSODEG00000005443	-	98	30.441	ENSTNIG00000015681	rnf17	55	30.289	Tetraodon_nigroviridis
ENSODEG00000005443	-	100	77.868	ENSUMAG00000013953	-	100	77.868	Ursus_maritimus
ENSODEG00000005443	-	100	86.441	ENSVVUG00000006226	RNF17	55	70.896	Vulpes_vulpes
ENSODEG00000005443	-	100	41.615	ENSXETG00000034020	RNF17	100	41.460	Xenopus_tropicalis