EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005445 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2123 bases
Position: chrJH651529.1:5398584-5400706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007291	RRM_1	PF00076.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007402	-	1434	-	ENSODEP00000007291	477 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005445	-	56	40.000	ENSODEG00000000735	-	63	40.136
ENSODEG00000005445	-	56	39.527	ENSODEG00000018002	-	58	39.527
ENSODEG00000005445	-	73	35.749	ENSODEG00000004873	RBM47	53	39.048
ENSODEG00000005445	-	90	58.964	ENSODEG00000004900	-	86	57.738
ENSODEG00000005445	-	81	61.818	ENSODEG00000008768	SYNCRIP	91	53.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005445	-	91	48.093	ENSCHIG00000025862	-	79	49.785	Capra_hircus
ENSODEG00000005445	-	88	37.826	FBgn0038826	Syp	58	45.806	Drosophila_melanogaster
ENSODEG00000005445	-	73	82.258	ENSGMOG00000002822	-	63	81.481	Gadus_morhua
ENSODEG00000005445	-	63	50.464	ENSGGOG00000036671	-	98	52.016	Gorilla_gorilla
ENSODEG00000005445	-	73	83.607	ENSMAMG00000004406	-	84	52.652	Mastacembelus_armatus
ENSODEG00000005445	-	90	47.908	ENSPTRG00000043439	-	99	50.731	Pan_troglodytes
ENSODEG00000005445	-	61	49.533	ENSPCOG00000014665	-	81	52.510	Propithecus_coquereli
ENSODEG00000005445	-	67	68.280	ENSTGUG00000012478	-	79	55.190	Taeniopygia_guttata
ENSODEG00000005445	-	90	79.054	ENSTBEG00000002251	-	84	58.912	Tupaia_belangeri
ENSODEG00000005445	-	84	79.054	ENSTTRG00000007752	-	69	80.405	Tursiops_truncatus
ENSODEG00000005445	-	70	66.332	ENSTTRG00000004471	-	65	54.768	Tursiops_truncatus
ENSODEG00000005445	-	72	94.231	ENSVPAG00000006411	-	64	94.231	Vicugna_pacos