EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005452 (Gene tree)
Gene ID: 101569764
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 173340 bases
Position: chrJH651602.1:7503311-7676650
Accession: 101569764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007311	ResIII	PF04851.15	2e-08	1	1
ENSODEP00000007310	ResIII	PF04851.15	2.1e-08	1	1
ENSODEP00000007311	BRK	PF07533.16	1.8e-17	1	1
ENSODEP00000007310	BRK	PF07533.16	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007425	SMARCA2-205	753	-	ENSODEP00000007314	251 (aa)	-	-
ENSODET00000007424	SMARCA2-204	204	-	ENSODEP00000007313	68 (aa)	-	UPI0007699FBA
ENSODET00000007423	SMARCA2-203	807	XM_023721879	ENSODEP00000007312	269 (aa)	XP_023577647	-
ENSODET00000007422	SMARCA2-202	4761	-	ENSODEP00000007311	1586 (aa)	-	-
ENSODET00000007421	SMARCA2-201	4833	XM_004637219	ENSODEP00000007310	1610 (aa)	XP_023577652	UPI000C9EF515

Gene Model

Click here to download ENSODEG00000005452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005452	SMARCA2	96	75.972	ENSODEG00000017127	SMARCA4	97	75.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005452	SMARCA2	99	96.350	ENSG00000080503	SMARCA2	100	99.329	Homo_sapiens
ENSODEG00000005452	SMARCA2	98	80.253	ENSAPOG00000002641	SMARCA2	97	79.023	Acanthochromis_polyacanthus
ENSODEG00000005452	SMARCA2	90	88.361	ENSAMEG00000012325	SMARCA2	99	98.976	Ailuropoda_melanoleuca
ENSODEG00000005452	SMARCA2	98	78.788	ENSACIG00000015607	SMARCA2	97	78.489	Amphilophus_citrinellus
ENSODEG00000005452	SMARCA2	98	80.025	ENSAOCG00000009647	-	81	84.548	Amphiprion_ocellaris
ENSODEG00000005452	SMARCA2	98	80.063	ENSAPEG00000007646	SMARCA2	96	78.966	Amphiprion_percula
ENSODEG00000005452	SMARCA2	99	80.692	ENSATEG00000006916	SMARCA2	81	85.494	Anabas_testudineus
ENSODEG00000005452	SMARCA2	89	89.044	ENSAPLG00000013873	SMARCA2	94	88.338	Anas_platyrhynchos
ENSODEG00000005452	SMARCA2	98	89.194	ENSACAG00000002423	SMARCA2	99	88.557	Anolis_carolinensis
ENSODEG00000005452	SMARCA2	99	96.728	ENSANAG00000026498	SMARCA2	99	96.728	Aotus_nancymaae
ENSODEG00000005452	SMARCA2	98	79.949	ENSACLG00000004248	SMARCA2	97	79.844	Astatotilapia_calliptera
ENSODEG00000005452	SMARCA2	99	80.393	ENSAMXG00000012404	smarca2	96	79.780	Astyanax_mexicanus
ENSODEG00000005452	SMARCA2	99	95.165	ENSBTAG00000007494	SMARCA2	99	94.607	Bos_taurus
ENSODEG00000005452	SMARCA2	99	96.127	ENSCJAG00000010710	SMARCA2	99	96.813	Callithrix_jacchus
ENSODEG00000005452	SMARCA2	99	95.409	ENSCAFG00000002013	SMARCA2	99	94.981	Canis_familiaris
ENSODEG00000005452	SMARCA2	77	94.422	ENSCAFG00020026802	SMARCA2	98	94.422	Canis_lupus_dingo
ENSODEG00000005452	SMARCA2	99	96.101	ENSCHIG00000025863	SMARCA2	99	96.101	Capra_hircus
ENSODEG00000005452	SMARCA2	99	96.178	ENSTSYG00000003858	SMARCA2	99	95.938	Carlito_syrichta
ENSODEG00000005452	SMARCA2	99	93.774	ENSCAPG00000002890	SMARCA2	100	92.516	Cavia_aperea
ENSODEG00000005452	SMARCA2	99	96.985	ENSCPOG00000005475	SMARCA2	99	96.985	Cavia_porcellus
ENSODEG00000005452	SMARCA2	99	96.728	ENSCCAG00000030636	SMARCA2	99	96.728	Cebus_capucinus
ENSODEG00000005452	SMARCA2	99	95.972	ENSCATG00000031470	SMARCA2	99	95.972	Cercocebus_atys
ENSODEG00000005452	SMARCA2	99	97.772	ENSCLAG00000014484	SMARCA2	99	97.772	Chinchilla_lanigera
ENSODEG00000005452	SMARCA2	93	95.876	ENSCSAG00000008650	SMARCA2	99	95.538	Chlorocebus_sabaeus
ENSODEG00000005452	SMARCA2	85	90.256	ENSCHOG00000004316	SMARCA2	86	90.244	Choloepus_hoffmanni
ENSODEG00000005452	SMARCA2	98	90.455	ENSCPBG00000025463	SMARCA2	99	94.279	Chrysemys_picta_bellii
ENSODEG00000005452	SMARCA2	99	96.741	ENSCANG00000039597	SMARCA2	99	96.741	Colobus_angolensis_palliatus
ENSODEG00000005452	SMARCA2	99	88.805	ENSCGRG00001002323	Smarca2	99	88.040	Cricetulus_griseus_chok1gshd
ENSODEG00000005452	SMARCA2	99	76.304	ENSCSEG00000019311	SMARCA2	97	76.448	Cynoglossus_semilaevis
ENSODEG00000005452	SMARCA2	84	78.672	ENSCVAG00000016571	SMARCA2	77	85.143	Cyprinodon_variegatus
ENSODEG00000005452	SMARCA2	98	81.512	ENSDARG00000008904	smarca2	82	86.472	Danio_rerio
ENSODEG00000005452	SMARCA2	99	93.612	ENSDNOG00000006402	SMARCA2	99	92.597	Dasypus_novemcinctus
ENSODEG00000005452	SMARCA2	99	96.426	ENSDORG00000014832	Smarca2	99	96.426	Dipodomys_ordii
ENSODEG00000005452	SMARCA2	79	58.819	FBgn0000212	brm	71	62.932	Drosophila_melanogaster
ENSODEG00000005452	SMARCA2	94	70.093	ENSEBUG00000011442	-	81	75.606	Eptatretus_burgeri
ENSODEG00000005452	SMARCA2	86	61.769	ENSEBUG00000002449	-	84	68.465	Eptatretus_burgeri
ENSODEG00000005452	SMARCA2	99	95.293	ENSEASG00005010312	SMARCA2	99	94.860	Equus_asinus_asinus
ENSODEG00000005452	SMARCA2	66	97.222	ENSEEUG00000015540	-	69	97.222	Erinaceus_europaeus
ENSODEG00000005452	SMARCA2	92	80.623	ENSELUG00000010318	smarca2	93	78.912	Esox_lucius
ENSODEG00000005452	SMARCA2	98	94.877	ENSFCAG00000001568	SMARCA2	99	94.479	Felis_catus
ENSODEG00000005452	SMARCA2	98	90.364	ENSFALG00000010416	SMARCA2	88	95.046	Ficedula_albicollis
ENSODEG00000005452	SMARCA2	99	96.306	ENSFDAG00000010502	SMARCA2	99	95.982	Fukomys_damarensis
ENSODEG00000005452	SMARCA2	98	80.063	ENSFHEG00000021250	SMARCA2	97	78.732	Fundulus_heteroclitus
ENSODEG00000005452	SMARCA2	97	77.081	ENSGMOG00000014229	SMARCA2	83	82.154	Gadus_morhua
ENSODEG00000005452	SMARCA2	98	90.874	ENSGALG00000010164	SMARCA2	83	94.892	Gallus_gallus
ENSODEG00000005452	SMARCA2	94	76.008	ENSGAFG00000001164	SMARCA2	93	75.625	Gambusia_affinis
ENSODEG00000005452	SMARCA2	98	78.828	ENSGACG00000014488	SMARCA2	82	83.991	Gasterosteus_aculeatus
ENSODEG00000005452	SMARCA2	98	90.647	ENSGAGG00000024412	SMARCA2	99	88.605	Gopherus_agassizii
ENSODEG00000005452	SMARCA2	99	92.008	ENSGGOG00000000513	SMARCA2	99	96.411	Gorilla_gorilla
ENSODEG00000005452	SMARCA2	99	79.349	ENSHBUG00000006691	SMARCA2	96	79.268	Haplochromis_burtoni
ENSODEG00000005452	SMARCA2	99	96.817	ENSHGLG00000005215	SMARCA2	100	95.529	Heterocephalus_glaber_female
ENSODEG00000005452	SMARCA2	99	95.535	ENSHGLG00100010496	SMARCA2	99	95.535	Heterocephalus_glaber_male
ENSODEG00000005452	SMARCA2	64	86.647	ENSHCOG00000015348	-	74	86.634	Hippocampus_comes
ENSODEG00000005452	SMARCA2	98	80.711	ENSIPUG00000011060	smarca2	94	80.525	Ictalurus_punctatus
ENSODEG00000005452	SMARCA2	99	97.194	ENSSTOG00000006812	SMARCA2	99	97.194	Ictidomys_tridecemlineatus
ENSODEG00000005452	SMARCA2	99	95.423	ENSJJAG00000010867	Smarca2	99	94.737	Jaculus_jaculus
ENSODEG00000005452	SMARCA2	98	79.787	ENSKMAG00000015844	-	97	78.558	Kryptolebias_marmoratus
ENSODEG00000005452	SMARCA2	96	83.666	ENSLOCG00000011499	smarca2	82	88.003	Lepisosteus_oculatus
ENSODEG00000005452	SMARCA2	99	93.304	ENSLAFG00000014061	SMARCA2	82	96.713	Loxodonta_africana
ENSODEG00000005452	SMARCA2	99	95.535	ENSMFAG00000003814	SMARCA2	99	95.535	Macaca_fascicularis
ENSODEG00000005452	SMARCA2	99	96.813	ENSMMUG00000015279	SMARCA2	99	96.813	Macaca_mulatta
ENSODEG00000005452	SMARCA2	99	95.469	ENSMNEG00000041069	SMARCA2	99	95.286	Macaca_nemestrina
ENSODEG00000005452	SMARCA2	99	94.147	ENSMLEG00000027418	SMARCA2	99	94.185	Mandrillus_leucophaeus
ENSODEG00000005452	SMARCA2	98	80.263	ENSMAMG00000003056	SMARCA2	97	81.146	Mastacembelus_armatus
ENSODEG00000005452	SMARCA2	99	79.498	ENSMZEG00005020709	SMARCA2	96	79.421	Maylandia_zebra
ENSODEG00000005452	SMARCA2	76	77.822	ENSMGAG00000005160	-	100	76.760	Meleagris_gallopavo
ENSODEG00000005452	SMARCA2	99	96.352	ENSMICG00000005162	SMARCA2	99	96.352	Microcebus_murinus
ENSODEG00000005452	SMARCA2	99	95.990	ENSMOCG00000001611	Smarca2	99	95.990	Microtus_ochrogaster
ENSODEG00000005452	SMARCA2	99	78.030	ENSMMOG00000014196	SMARCA2	97	78.238	Mola_mola
ENSODEG00000005452	SMARCA2	99	90.467	ENSMODG00000003578	SMARCA2	99	89.969	Monodelphis_domestica
ENSODEG00000005452	SMARCA2	99	79.722	ENSMALG00000009611	SMARCA2	97	79.585	Monopterus_albus
ENSODEG00000005452	SMARCA2	99	95.295	MGP_CAROLIEiJ_G0022841	Smarca2	99	95.304	Mus_caroli
ENSODEG00000005452	SMARCA2	99	95.355	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSODEG00000005452	SMARCA2	99	95.412	MGP_PahariEiJ_G0014334	Smarca2	99	95.412	Mus_pahari
ENSODEG00000005452	SMARCA2	98	95.644	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSODEG00000005452	SMARCA2	79	98.821	ENSMPUG00000005171	SMARCA2	94	98.821	Mustela_putorius_furo
ENSODEG00000005452	SMARCA2	99	89.843	ENSMLUG00000002342	SMARCA2	83	92.792	Myotis_lucifugus
ENSODEG00000005452	SMARCA2	99	94.730	ENSNGAG00000000108	Smarca2	99	94.476	Nannospalax_galili
ENSODEG00000005452	SMARCA2	93	67.245	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSODEG00000005452	SMARCA2	99	93.674	ENSNLEG00000008575	SMARCA2	99	93.674	Nomascus_leucogenys
ENSODEG00000005452	SMARCA2	99	84.465	ENSMEUG00000009812	SMARCA2	99	84.277	Notamacropus_eugenii
ENSODEG00000005452	SMARCA2	99	89.377	ENSOPRG00000013474	SMARCA2	99	89.594	Ochotona_princeps
ENSODEG00000005452	SMARCA2	99	80.150	ENSONIG00000014163	SMARCA2	78	86.619	Oreochromis_niloticus
ENSODEG00000005452	SMARCA2	99	95.556	ENSOCUG00000006320	SMARCA2	99	95.114	Oryctolagus_cuniculus
ENSODEG00000005452	SMARCA2	98	79.518	ENSORLG00000020820	SMARCA2	97	77.990	Oryzias_latipes
ENSODEG00000005452	SMARCA2	98	79.721	ENSORLG00015006289	SMARCA2	97	77.990	Oryzias_latipes_hsok
ENSODEG00000005452	SMARCA2	98	80.140	ENSOMEG00000009736	-	97	79.377	Oryzias_melastigma
ENSODEG00000005452	SMARCA2	99	92.719	ENSOGAG00000017053	SMARCA2	99	92.217	Otolemur_garnettii
ENSODEG00000005452	SMARCA2	99	93.837	ENSOARG00000013265	SMARCA2	99	93.283	Ovis_aries
ENSODEG00000005452	SMARCA2	99	92.396	ENSPPAG00000038717	SMARCA2	99	92.544	Pan_paniscus
ENSODEG00000005452	SMARCA2	98	94.940	ENSPPRG00000001879	SMARCA2	99	94.542	Panthera_pardus
ENSODEG00000005452	SMARCA2	99	95.217	ENSPTRG00000051168	SMARCA2	99	95.272	Pan_troglodytes
ENSODEG00000005452	SMARCA2	99	89.579	ENSPANG00000025121	SMARCA2	99	89.014	Papio_anubis
ENSODEG00000005452	SMARCA2	99	82.014	ENSPKIG00000018469	-	97	81.409	Paramormyrops_kingsleyae
ENSODEG00000005452	SMARCA2	98	89.873	ENSPSIG00000006284	SMARCA2	99	89.581	Pelodiscus_sinensis
ENSODEG00000005452	SMARCA2	99	73.358	ENSPMGG00000013696	-	98	73.257	Periophthalmus_magnuspinnatus
ENSODEG00000005452	SMARCA2	99	95.660	ENSPEMG00000019821	Smarca2	99	95.660	Peromyscus_maniculatus_bairdii
ENSODEG00000005452	SMARCA2	94	72.080	ENSPMAG00000005337	-	78	78.348	Petromyzon_marinus
ENSODEG00000005452	SMARCA2	99	92.112	ENSPCIG00000015658	SMARCA2	99	91.603	Phascolarctos_cinereus
ENSODEG00000005452	SMARCA2	98	79.760	ENSPFOG00000001856	SMARCA2	81	83.935	Poecilia_formosa
ENSODEG00000005452	SMARCA2	99	78.178	ENSPLAG00000017829	SMARCA2	82	80.880	Poecilia_latipinna
ENSODEG00000005452	SMARCA2	99	78.226	ENSPMEG00000001815	-	80	84.000	Poecilia_mexicana
ENSODEG00000005452	SMARCA2	98	79.224	ENSPREG00000013800	SMARCA2	97	76.151	Poecilia_reticulata
ENSODEG00000005452	SMARCA2	99	95.672	ENSPPYG00000019258	SMARCA2	99	95.280	Pongo_abelii
ENSODEG00000005452	SMARCA2	78	84.343	ENSPCAG00000016969	SMARCA2	77	84.470	Procavia_capensis
ENSODEG00000005452	SMARCA2	99	94.129	ENSPCOG00000025709	SMARCA2	99	93.581	Propithecus_coquereli
ENSODEG00000005452	SMARCA2	90	96.133	ENSPVAG00000000901	SMARCA2	94	96.133	Pteropus_vampyrus
ENSODEG00000005452	SMARCA2	99	76.408	ENSPNYG00000004533	SMARCA2	96	74.984	Pundamilia_nyererei
ENSODEG00000005452	SMARCA2	98	82.498	ENSPNAG00000014635	smarca2	82	87.443	Pygocentrus_nattereri
ENSODEG00000005452	SMARCA2	99	96.229	ENSRNOG00000011931	Smarca2	99	94.922	Rattus_norvegicus
ENSODEG00000005452	SMARCA2	99	95.080	ENSRBIG00000038618	SMARCA2	99	95.080	Rhinopithecus_bieti
ENSODEG00000005452	SMARCA2	99	95.091	ENSRROG00000019271	SMARCA2	99	96.236	Rhinopithecus_roxellana
ENSODEG00000005452	SMARCA2	99	92.637	ENSSBOG00000034827	SMARCA2	99	92.826	Saimiri_boliviensis_boliviensis
ENSODEG00000005452	SMARCA2	99	90.343	ENSSHAG00000007884	SMARCA2	99	89.782	Sarcophilus_harrisii
ENSODEG00000005452	SMARCA2	90	82.905	ENSSFOG00015014870	SMARCA2	94	84.660	Scleropages_formosus
ENSODEG00000005452	SMARCA2	98	79.520	ENSSMAG00000013707	SMARCA2	97	79.344	Scophthalmus_maximus
ENSODEG00000005452	SMARCA2	98	78.792	ENSSDUG00000008852	-	97	80.025	Seriola_dumerili
ENSODEG00000005452	SMARCA2	99	79.013	ENSSLDG00000025449	SMARCA2	97	79.279	Seriola_lalandi_dorsalis
ENSODEG00000005452	SMARCA2	94	93.939	ENSSARG00000007888	SMARCA2	95	90.270	Sorex_araneus
ENSODEG00000005452	SMARCA2	96	83.152	ENSSPUG00000001629	SMARCA2	97	84.190	Sphenodon_punctatus
ENSODEG00000005452	SMARCA2	98	80.316	ENSSPAG00000020091	-	95	79.851	Stegastes_partitus
ENSODEG00000005452	SMARCA2	99	96.101	ENSSSCG00000005232	SMARCA2	99	96.101	Sus_scrofa
ENSODEG00000005452	SMARCA2	96	90.183	ENSTGUG00000005460	SMARCA2	97	87.101	Taeniopygia_guttata
ENSODEG00000005452	SMARCA2	98	79.621	ENSTRUG00000015619	SMARCA2	97	76.977	Takifugu_rubripes
ENSODEG00000005452	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSODEG00000005452	SMARCA2	94	94.858	ENSTTRG00000002033	SMARCA2	95	94.789	Tursiops_truncatus
ENSODEG00000005452	SMARCA2	88	93.116	ENSUAMG00000024701	SMARCA2	99	93.116	Ursus_americanus
ENSODEG00000005452	SMARCA2	91	87.321	ENSVPAG00000001204	SMARCA2	100	87.321	Vicugna_pacos
ENSODEG00000005452	SMARCA2	75	95.250	ENSVVUG00000004598	SMARCA2	99	95.250	Vulpes_vulpes
ENSODEG00000005452	SMARCA2	99	82.886	ENSXETG00000015299	smarca2	81	87.062	Xenopus_tropicalis
ENSODEG00000005452	SMARCA2	89	78.977	ENSXCOG00000011073	SMARCA2	97	78.823	Xiphophorus_couchianus
ENSODEG00000005452	SMARCA2	99	78.420	ENSXMAG00000015611	SMARCA2	96	77.172	Xiphophorus_maculatus