EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005475 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 41289 bases
Position: chrJH651642.1:1749505-1790793
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007341	Translin	PF01997.16	2.5e-55	1	1
ENSODEP00000007340	Translin	PF01997.16	8.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007452	-	504	-	ENSODEP00000007340	168 (aa)	-	-
ENSODET00000007453	-	795	-	ENSODEP00000007341	264 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005475	-	98	67.037	ENSODEG00000000115	-	94	67.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005475	-	98	97.576	ENSG00000116918	TSNAX	100	93.865	Homo_sapiens
ENSODEG00000005475	-	95	65.769	ENSAPOG00000011188	tsnax	90	65.769	Acanthochromis_polyacanthus
ENSODEG00000005475	-	98	98.182	ENSAMEG00000002637	-	95	93.116	Ailuropoda_melanoleuca
ENSODEG00000005475	-	94	67.460	ENSACIG00000005910	tsnax	91	67.460	Amphilophus_citrinellus
ENSODEG00000005475	-	94	66.667	ENSAOCG00000012857	tsnax	92	66.667	Amphiprion_ocellaris
ENSODEG00000005475	-	94	66.154	ENSAPEG00000024161	tsnax	98	66.154	Amphiprion_percula
ENSODEG00000005475	-	94	66.279	ENSATEG00000014674	tsnax	91	66.279	Anabas_testudineus
ENSODEG00000005475	-	100	75.451	ENSAPLG00000013433	-	95	75.451	Anas_platyrhynchos
ENSODEG00000005475	-	100	76.173	ENSACAG00000002787	-	95	76.534	Anolis_carolinensis
ENSODEG00000005475	-	98	97.576	ENSANAG00000023733	-	95	92.754	Aotus_nancymaae
ENSODEG00000005475	-	75	65.657	ENSACLG00000023252	tsnax	86	65.657	Astatotilapia_calliptera
ENSODEG00000005475	-	95	63.359	ENSAMXG00000024558	tsnax	93	63.359	Astyanax_mexicanus
ENSODEG00000005475	-	98	96.970	ENSBTAG00000047434	TSNAX	99	95.968	Bos_taurus
ENSODEG00000005475	-	98	97.576	ENSCJAG00000039956	-	97	94.531	Callithrix_jacchus
ENSODEG00000005475	-	98	98.182	ENSCAFG00000030982	-	95	92.754	Canis_familiaris
ENSODEG00000005475	-	98	98.182	ENSCAFG00020027186	-	95	92.754	Canis_lupus_dingo
ENSODEG00000005475	-	98	96.970	ENSCHIG00000012051	-	95	92.391	Capra_hircus
ENSODEG00000005475	-	98	98.788	ENSTSYG00000026820	-	95	93.116	Carlito_syrichta
ENSODEG00000005475	-	90	93.173	ENSTSYG00000014070	-	99	93.173	Carlito_syrichta
ENSODEG00000005475	-	89	93.927	ENSCAPG00000007224	-	95	93.927	Cavia_aperea
ENSODEG00000005475	-	98	98.788	ENSCPOG00000036257	-	95	94.203	Cavia_porcellus
ENSODEG00000005475	-	98	97.576	ENSCCAG00000025312	-	96	95.276	Cebus_capucinus
ENSODEG00000005475	-	98	96.970	ENSCATG00000037048	TSNAX	93	97.541	Cercocebus_atys
ENSODEG00000005475	-	98	98.788	ENSCLAG00000004894	-	95	93.841	Chinchilla_lanigera
ENSODEG00000005475	-	98	96.970	ENSCSAG00000010285	TSNAX	95	91.304	Chlorocebus_sabaeus
ENSODEG00000005475	-	90	89.960	ENSCHOG00000009515	-	100	89.960	Choloepus_hoffmanni
ENSODEG00000005475	-	100	77.617	ENSCPBG00000006086	-	95	77.617	Chrysemys_picta_bellii
ENSODEG00000005475	-	98	96.970	ENSCANG00000018814	TSNAX	96	95.276	Colobus_angolensis_palliatus
ENSODEG00000005475	-	95	94.340	ENSCGRG00001011132	Tsnax	95	89.130	Cricetulus_griseus_chok1gshd
ENSODEG00000005475	-	95	94.340	ENSCGRG00000017310	Tsnax	95	89.130	Cricetulus_griseus_crigri
ENSODEG00000005475	-	94	68.110	ENSCSEG00000013110	tsnax	92	68.110	Cynoglossus_semilaevis
ENSODEG00000005475	-	94	58.661	ENSCVAG00000003427	tsnax	90	58.661	Cyprinodon_variegatus
ENSODEG00000005475	-	99	62.651	ENSDARG00000115282	tsnax	91	64.591	Danio_rerio
ENSODEG00000005475	-	100	96.450	ENSDNOG00000049219	-	95	92.754	Dasypus_novemcinctus
ENSODEG00000005475	-	97	87.266	ENSDORG00000013537	Tsnax	99	87.266	Dipodomys_ordii
ENSODEG00000005475	-	91	34.831	FBgn0038327	Trax	90	34.831	Drosophila_melanogaster
ENSODEG00000005475	-	69	96.154	ENSETEG00000005204	-	67	96.154	Echinops_telfairi
ENSODEG00000005475	-	86	57.328	ENSEBUG00000013286	tsnax	94	57.328	Eptatretus_burgeri
ENSODEG00000005475	-	98	98.788	ENSEASG00005012828	-	95	92.391	Equus_asinus_asinus
ENSODEG00000005475	-	100	71.377	ENSEEUG00000001465	-	95	71.377	Erinaceus_europaeus
ENSODEG00000005475	-	95	67.308	ENSELUG00000018955	tsnax	90	67.308	Esox_lucius
ENSODEG00000005475	-	98	97.576	ENSFCAG00000028088	-	95	92.391	Felis_catus
ENSODEG00000005475	-	74	72.000	ENSFCAG00000039622	-	99	72.000	Felis_catus
ENSODEG00000005475	-	99	75.362	ENSFALG00000003260	-	96	75.362	Ficedula_albicollis
ENSODEG00000005475	-	96	97.516	ENSFDAG00000015968	-	99	97.516	Fukomys_damarensis
ENSODEG00000005475	-	97	63.077	ENSFHEG00000005717	tsnax	99	63.077	Fundulus_heteroclitus
ENSODEG00000005475	-	97	65.169	ENSGMOG00000018552	tsnax	99	65.169	Gadus_morhua
ENSODEG00000005475	-	100	75.812	ENSGALG00000037177	TSNAX	95	75.812	Gallus_gallus
ENSODEG00000005475	-	97	64.286	ENSGAFG00000005000	tsnax	94	64.286	Gambusia_affinis
ENSODEG00000005475	-	94	66.797	ENSGACG00000004171	tsnax	91	66.797	Gasterosteus_aculeatus
ENSODEG00000005475	-	100	77.256	ENSGAGG00000012851	-	95	77.256	Gopherus_agassizii
ENSODEG00000005475	-	98	97.576	ENSGGOG00000039786	TSNAX	95	92.754	Gorilla_gorilla
ENSODEG00000005475	-	94	65.891	ENSHBUG00000020612	tsnax	91	65.891	Haplochromis_burtoni
ENSODEG00000005475	-	98	98.182	ENSHGLG00000012839	TSNAX	95	93.116	Heterocephalus_glaber_female
ENSODEG00000005475	-	98	95.152	ENSHGLG00100000780	-	95	91.304	Heterocephalus_glaber_male
ENSODEG00000005475	-	93	67.589	ENSHCOG00000009732	tsnax	90	67.589	Hippocampus_comes
ENSODEG00000005475	-	94	62.791	ENSIPUG00000018757	tsnax	96	62.257	Ictalurus_punctatus
ENSODEG00000005475	-	100	95.833	ENSSTOG00000024989	-	100	95.833	Ictidomys_tridecemlineatus
ENSODEG00000005475	-	100	88.043	ENSJJAG00000000228	-	95	88.043	Jaculus_jaculus
ENSODEG00000005475	-	95	69.697	ENSJJAG00000012285	-	94	69.697	Jaculus_jaculus
ENSODEG00000005475	-	95	64.615	ENSKMAG00000010607	tsnax	92	64.615	Kryptolebias_marmoratus
ENSODEG00000005475	-	97	67.669	ENSLBEG00000023264	tsnax	94	67.669	Labrus_bergylta
ENSODEG00000005475	-	97	67.669	ENSLBEG00000002951	-	93	67.669	Labrus_bergylta
ENSODEG00000005475	-	100	72.043	ENSLACG00000006294	tsnax	95	72.043	Latimeria_chalumnae
ENSODEG00000005475	-	98	66.052	ENSLOCG00000015831	tsnax	93	65.693	Lepisosteus_oculatus
ENSODEG00000005475	-	100	81.071	ENSLAFG00000006692	-	95	81.071	Loxodonta_africana
ENSODEG00000005475	-	98	96.970	ENSMFAG00000038495	TSNAX	93	97.541	Macaca_fascicularis
ENSODEG00000005475	-	98	96.970	ENSMMUG00000016204	TSNAX	89	96.970	Macaca_mulatta
ENSODEG00000005475	-	98	96.970	ENSMNEG00000038898	TSNAX	93	97.541	Macaca_nemestrina
ENSODEG00000005475	-	98	96.970	ENSMLEG00000004157	TSNAX	96	95.276	Mandrillus_leucophaeus
ENSODEG00000005475	-	99	63.370	ENSMAMG00000016932	tsnax	96	63.370	Mastacembelus_armatus
ENSODEG00000005475	-	94	65.891	ENSMZEG00005010018	tsnax	91	65.891	Maylandia_zebra
ENSODEG00000005475	-	100	75.090	ENSMGAG00000011981	-	100	77.707	Meleagris_gallopavo
ENSODEG00000005475	-	99	95.210	ENSMAUG00000019962	Tsnax	99	95.210	Mesocricetus_auratus
ENSODEG00000005475	-	98	97.576	ENSMICG00000043895	-	95	92.391	Microcebus_murinus
ENSODEG00000005475	-	98	95.152	ENSMOCG00000007651	Tsnax	95	90.580	Microtus_ochrogaster
ENSODEG00000005475	-	92	65.613	ENSMMOG00000008821	tsnax	91	65.613	Mola_mola
ENSODEG00000005475	-	92	81.176	ENSMODG00000008812	-	100	81.176	Monodelphis_domestica
ENSODEG00000005475	-	96	64.639	ENSMALG00000005640	tsnax	95	64.639	Monopterus_albus
ENSODEG00000005475	-	98	91.515	MGP_CAROLIEiJ_G0031718	Tsnax	95	88.043	Mus_caroli
ENSODEG00000005475	-	99	92.814	ENSMUSG00000056820	Tsnax	99	92.814	Mus_musculus
ENSODEG00000005475	-	98	91.515	MGP_PahariEiJ_G0023316	Tsnax	95	88.768	Mus_pahari
ENSODEG00000005475	-	98	92.121	MGP_SPRETEiJ_G0032836	Tsnax	95	88.768	Mus_spretus
ENSODEG00000005475	-	98	98.182	ENSMPUG00000005572	-	95	93.116	Mustela_putorius_furo
ENSODEG00000005475	-	100	87.410	ENSMLUG00000015591	-	95	87.410	Myotis_lucifugus
ENSODEG00000005475	-	59	86.391	ENSMLUG00000028551	-	100	86.391	Myotis_lucifugus
ENSODEG00000005475	-	98	96.364	ENSNGAG00000014498	Tsnax	95	91.667	Nannospalax_galili
ENSODEG00000005475	-	97	64.981	ENSNBRG00000020060	tsnax	93	64.981	Neolamprologus_brichardi
ENSODEG00000005475	-	98	97.576	ENSNLEG00000035882	TSNAX	93	97.541	Nomascus_leucogenys
ENSODEG00000005475	-	100	76.449	ENSOPRG00000008613	-	95	76.449	Ochotona_princeps
ENSODEG00000005475	-	94	65.759	ENSONIG00000010125	tsnax	91	65.759	Oreochromis_niloticus
ENSODEG00000005475	-	96	80.247	ENSOANG00000013721	-	97	75.451	Ornithorhynchus_anatinus
ENSODEG00000005475	-	98	96.970	ENSOCUG00000029456	-	95	92.391	Oryctolagus_cuniculus
ENSODEG00000005475	-	97	64.906	ENSORLG00000030285	tsnax	94	64.906	Oryzias_latipes
ENSODEG00000005475	-	97	64.906	ENSORLG00020007594	tsnax	94	64.906	Oryzias_latipes_hni
ENSODEG00000005475	-	97	65.283	ENSORLG00015022705	tsnax	94	65.283	Oryzias_latipes_hsok
ENSODEG00000005475	-	94	64.341	ENSOMEG00000019256	tsnax	92	64.341	Oryzias_melastigma
ENSODEG00000005475	-	98	95.732	ENSOGAG00000027793	-	95	91.304	Otolemur_garnettii
ENSODEG00000005475	-	98	95.152	ENSOGAG00000005575	-	95	91.304	Otolemur_garnettii
ENSODEG00000005475	-	98	96.970	ENSOARG00000003276	-	95	92.391	Ovis_aries
ENSODEG00000005475	-	98	97.576	ENSPPAG00000030431	TSNAX	95	92.754	Pan_paniscus
ENSODEG00000005475	-	98	97.576	ENSPPRG00000013142	-	95	92.029	Panthera_pardus
ENSODEG00000005475	-	77	70.769	ENSPPRG00000015159	-	99	70.769	Panthera_pardus
ENSODEG00000005475	-	98	96.970	ENSPTIG00000014357	-	95	92.029	Panthera_tigris_altaica
ENSODEG00000005475	-	98	96.970	ENSPTRG00000002111	TSNAX	95	92.391	Pan_troglodytes
ENSODEG00000005475	-	98	96.970	ENSPANG00000008379	TSNAX	95	91.667	Papio_anubis
ENSODEG00000005475	-	98	66.667	ENSPKIG00000023546	tsnax	94	66.667	Paramormyrops_kingsleyae
ENSODEG00000005475	-	63	76.966	ENSPSIG00000005320	-	100	76.966	Pelodiscus_sinensis
ENSODEG00000005475	-	95	66.412	ENSPMGG00000015045	tsnax	93	66.412	Periophthalmus_magnuspinnatus
ENSODEG00000005475	-	94	65.637	ENSPFOG00000019341	tsnax	92	65.637	Poecilia_formosa
ENSODEG00000005475	-	94	66.929	ENSPLAG00000011565	tsnax	91	66.929	Poecilia_latipinna
ENSODEG00000005475	-	73	57.143	ENSPMEG00000023599	tsnax	95	57.143	Poecilia_mexicana
ENSODEG00000005475	-	94	66.929	ENSPMEG00000023751	tsnax	90	66.929	Poecilia_mexicana
ENSODEG00000005475	-	98	63.258	ENSPREG00000008389	tsnax	92	63.258	Poecilia_reticulata
ENSODEG00000005475	-	98	97.576	ENSPPYG00000000112	TSNAX	95	92.754	Pongo_abelii
ENSODEG00000005475	-	90	91.968	ENSPCAG00000015420	-	100	91.968	Procavia_capensis
ENSODEG00000005475	-	98	97.576	ENSPCOG00000028517	-	95	92.029	Propithecus_coquereli
ENSODEG00000005475	-	98	95.152	ENSPVAG00000008865	-	95	89.130	Pteropus_vampyrus
ENSODEG00000005475	-	94	65.504	ENSPNYG00000013680	tsnax	91	65.504	Pundamilia_nyererei
ENSODEG00000005475	-	95	66.142	ENSPNAG00000014630	tsnax	91	66.142	Pygocentrus_nattereri
ENSODEG00000005475	-	98	90.909	ENSRNOG00000049784	Tsnax	95	87.681	Rattus_norvegicus
ENSODEG00000005475	-	98	96.364	ENSRBIG00000040246	TSNAX	95	91.304	Rhinopithecus_bieti
ENSODEG00000005475	-	98	96.364	ENSRROG00000044480	TSNAX	95	91.304	Rhinopithecus_roxellana
ENSODEG00000005475	-	98	97.576	ENSSBOG00000024783	-	95	92.754	Saimiri_boliviensis_boliviensis
ENSODEG00000005475	-	76	78.774	ENSSHAG00000006139	-	100	78.774	Sarcophilus_harrisii
ENSODEG00000005475	-	99	65.704	ENSSFOG00015008267	tsnax	96	65.704	Scleropages_formosus
ENSODEG00000005475	-	97	66.541	ENSSMAG00000010696	tsnax	94	66.541	Scophthalmus_maximus
ENSODEG00000005475	-	98	64.103	ENSSDUG00000003358	tsnax	96	64.103	Seriola_dumerili
ENSODEG00000005475	-	98	64.469	ENSSLDG00000024597	tsnax	96	64.469	Seriola_lalandi_dorsalis
ENSODEG00000005475	-	96	93.210	ENSSARG00000011348	-	95	88.043	Sorex_araneus
ENSODEG00000005475	-	100	77.256	ENSSPUG00000012541	-	95	77.256	Sphenodon_punctatus
ENSODEG00000005475	-	99	61.131	ENSSPAG00000006951	tsnax	99	61.131	Stegastes_partitus
ENSODEG00000005475	-	98	97.576	ENSSSCG00000010171	TSNAX	100	89.804	Sus_scrofa
ENSODEG00000005475	-	94	82.390	ENSTGUG00000010090	-	95	76.812	Taeniopygia_guttata
ENSODEG00000005475	-	94	61.154	ENSTRUG00000013041	tsnax	91	61.154	Takifugu_rubripes
ENSODEG00000005475	-	94	62.992	ENSTNIG00000002351	tsnax	91	62.992	Tetraodon_nigroviridis
ENSODEG00000005475	-	98	74.545	ENSTBEG00000015973	-	95	64.130	Tupaia_belangeri
ENSODEG00000005475	-	90	91.165	ENSTTRG00000016578	-	100	91.165	Tursiops_truncatus
ENSODEG00000005475	-	51	86.986	ENSUAMG00000002616	-	100	86.986	Ursus_americanus
ENSODEG00000005475	-	99	98.204	ENSUAMG00000013798	-	99	98.204	Ursus_americanus
ENSODEG00000005475	-	100	89.855	ENSUMAG00000005995	-	96	89.855	Ursus_maritimus
ENSODEG00000005475	-	98	97.576	ENSVPAG00000003808	-	94	90.498	Vicugna_pacos
ENSODEG00000005475	-	99	97.605	ENSVVUG00000007083	-	95	97.605	Vulpes_vulpes
ENSODEG00000005475	-	99	61.131	ENSXETG00000026152	tsnax	95	61.131	Xenopus_tropicalis
ENSODEG00000005475	-	94	66.275	ENSXCOG00000006896	tsnax	99	62.257	Xiphophorus_couchianus
ENSODEG00000005475	-	94	64.093	ENSXMAG00000006738	tsnax	92	64.093	Xiphophorus_maculatus