EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005485 (Gene tree)
Gene ID: 101569794
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 9189 bases
Position: chrJH651645.1:2950276-2959464
Accession: 101569794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007352	RRM_1	PF00076.22	1.2e-30	1	2
ENSODEP00000007352	RRM_1	PF00076.22	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007464	SFPQ-201	1494	XM_012516864	ENSODEP00000007352	498 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005485	SFPQ	56	63.701	ENSODEG00000019012	-	76	53.102
ENSODEG00000005485	SFPQ	52	53.242	ENSODEG00000002994	-	66	54.969
ENSODEG00000005485	SFPQ	51	61.246	ENSODEG00000002224	-	68	59.021
ENSODEG00000005485	SFPQ	57	51.411	ENSODEG00000011878	-	78	50.456
ENSODEG00000005485	SFPQ	57	44.138	ENSODEG00000000530	-	61	44.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005485	SFPQ	86	87.021	ENSG00000116560	SFPQ	97	74.074	Homo_sapiens
ENSODEG00000005485	SFPQ	76	64.200	ENSAPOG00000024257	sfpq	60	64.169	Acanthochromis_polyacanthus
ENSODEG00000005485	SFPQ	77	86.150	ENSAMEG00000000815	SFPQ	97	86.854	Ailuropoda_melanoleuca
ENSODEG00000005485	SFPQ	87	57.895	ENSACIG00000000905	sfpq	69	63.158	Amphilophus_citrinellus
ENSODEG00000005485	SFPQ	75	64.678	ENSAOCG00000002889	sfpq	59	64.169	Amphiprion_ocellaris
ENSODEG00000005485	SFPQ	75	64.678	ENSAPEG00000016556	sfpq	59	64.169	Amphiprion_percula
ENSODEG00000005485	SFPQ	87	60.879	ENSATEG00000002981	sfpq	65	66.118	Anabas_testudineus
ENSODEG00000005485	SFPQ	59	65.455	ENSANAG00000037798	-	95	65.152	Aotus_nancymaae
ENSODEG00000005485	SFPQ	91	71.550	ENSANAG00000027438	-	65	77.037	Aotus_nancymaae
ENSODEG00000005485	SFPQ	59	75.082	ENSANAG00000021268	-	95	76.066	Aotus_nancymaae
ENSODEG00000005485	SFPQ	78	63.023	ENSACLG00000022332	sfpq	61	64.066	Astatotilapia_calliptera
ENSODEG00000005485	SFPQ	68	65.952	ENSAMXG00000011538	sfpq	63	63.466	Astyanax_mexicanus
ENSODEG00000005485	SFPQ	86	87.021	ENSBTAG00000016328	SFPQ	65	87.879	Bos_taurus
ENSODEG00000005485	SFPQ	54	45.725	WBGene00017778	nono-1	60	50.893	Caenorhabditis_elegans
ENSODEG00000005485	SFPQ	86	86.809	ENSCJAG00000001431	SFPQ	65	87.662	Callithrix_jacchus
ENSODEG00000005485	SFPQ	77	79.577	ENSCAFG00000017608	-	63	81.499	Canis_familiaris
ENSODEG00000005485	SFPQ	86	77.311	ENSCAFG00000018271	-	64	81.265	Canis_familiaris
ENSODEG00000005485	SFPQ	86	86.809	ENSCAFG00000003595	-	70	87.662	Canis_familiaris
ENSODEG00000005485	SFPQ	86	77.149	ENSCAFG00020004881	-	64	81.265	Canis_lupus_dingo
ENSODEG00000005485	SFPQ	59	78.916	ENSCAFG00020010702	-	96	78.313	Canis_lupus_dingo
ENSODEG00000005485	SFPQ	86	87.021	ENSCHIG00000023097	SFPQ	65	87.879	Capra_hircus
ENSODEG00000005485	SFPQ	59	82.493	ENSTSYG00000037120	-	96	83.383	Carlito_syrichta
ENSODEG00000005485	SFPQ	59	69.527	ENSTSYG00000035106	-	94	70.414	Carlito_syrichta
ENSODEG00000005485	SFPQ	59	78.116	ENSCPOG00000015018	-	96	79.331	Cavia_porcellus
ENSODEG00000005485	SFPQ	86	86.752	ENSCCAG00000029361	-	65	87.446	Cebus_capucinus
ENSODEG00000005485	SFPQ	86	68.008	ENSCATG00000032664	-	65	69.565	Cercocebus_atys
ENSODEG00000005485	SFPQ	69	91.153	ENSCATG00000036179	-	61	87.685	Cercocebus_atys
ENSODEG00000005485	SFPQ	59	82.493	ENSCLAG00000009583	-	96	83.383	Chinchilla_lanigera
ENSODEG00000005485	SFPQ	86	87.021	ENSCSAG00000001082	SFPQ	65	87.879	Chlorocebus_sabaeus
ENSODEG00000005485	SFPQ	65	78.962	ENSCHOG00000009131	SFPQ	96	79.781	Choloepus_hoffmanni
ENSODEG00000005485	SFPQ	78	80.460	ENSCPBG00000018674	SFPQ	66	80.465	Chrysemys_picta_bellii
ENSODEG00000005485	SFPQ	59	82.493	ENSCANG00000028087	-	96	83.383	Colobus_angolensis_palliatus
ENSODEG00000005485	SFPQ	85	86.422	ENSCGRG00001011698	Sfpq	66	87.013	Cricetulus_griseus_chok1gshd
ENSODEG00000005485	SFPQ	75	85.542	ENSCGRG00000010128	Sfpq	92	86.331	Cricetulus_griseus_crigri
ENSODEG00000005485	SFPQ	96	58.382	ENSCSEG00000007852	sfpq	64	64.303	Cynoglossus_semilaevis
ENSODEG00000005485	SFPQ	74	61.765	ENSCVAG00000019538	sfpq	62	59.662	Cyprinodon_variegatus
ENSODEG00000005485	SFPQ	72	65.404	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSODEG00000005485	SFPQ	86	86.596	ENSDNOG00000049454	SFPQ	65	87.662	Dasypus_novemcinctus
ENSODEG00000005485	SFPQ	86	87.021	ENSDORG00000008109	Sfpq	66	87.879	Dipodomys_ordii
ENSODEG00000005485	SFPQ	76	81.731	ENSETEG00000001095	SFPQ	59	81.731	Echinops_telfairi
ENSODEG00000005485	SFPQ	86	87.021	ENSEASG00005012012	SFPQ	65	87.879	Equus_asinus_asinus
ENSODEG00000005485	SFPQ	86	87.021	ENSECAG00000000642	SFPQ	65	87.879	Equus_caballus
ENSODEG00000005485	SFPQ	75	64.251	ENSELUG00000023145	sfpq	63	64.407	Esox_lucius
ENSODEG00000005485	SFPQ	86	87.021	ENSFCAG00000042862	SFPQ	66	87.879	Felis_catus
ENSODEG00000005485	SFPQ	59	79.525	ENSFALG00000000731	SFPQ	96	79.525	Ficedula_albicollis
ENSODEG00000005485	SFPQ	59	77.469	ENSFDAG00000017723	-	96	81.173	Fukomys_damarensis
ENSODEG00000005485	SFPQ	76	60.766	ENSFHEG00000015200	sfpq	54	61.244	Fundulus_heteroclitus
ENSODEG00000005485	SFPQ	76	65.476	ENSGMOG00000011950	SFPQ	72	65.468	Gadus_morhua
ENSODEG00000005485	SFPQ	82	60.976	ENSGMOG00000011957	sfpq	63	64.337	Gadus_morhua
ENSODEG00000005485	SFPQ	77	81.840	ENSGALG00000002514	SFPQ	65	81.840	Gallus_gallus
ENSODEG00000005485	SFPQ	90	54.016	ENSGAFG00000014571	sfpq	63	64.187	Gambusia_affinis
ENSODEG00000005485	SFPQ	94	58.712	ENSGACG00000002034	sfpq	66	65.083	Gasterosteus_aculeatus
ENSODEG00000005485	SFPQ	76	85.442	ENSGGOG00000026354	SFPQ	96	83.383	Gorilla_gorilla
ENSODEG00000005485	SFPQ	78	63.023	ENSHBUG00000016818	sfpq	61	64.066	Haplochromis_burtoni
ENSODEG00000005485	SFPQ	85	86.510	ENSHGLG00000012001	SFPQ	64	86.517	Heterocephalus_glaber_female
ENSODEG00000005485	SFPQ	59	82.493	ENSHGLG00100004136	-	96	83.383	Heterocephalus_glaber_male
ENSODEG00000005485	SFPQ	78	63.636	ENSHCOG00000008612	sfpq	59	68.807	Hippocampus_comes
ENSODEG00000005485	SFPQ	59	82.493	ENSSTOG00000014004	-	96	83.383	Ictidomys_tridecemlineatus
ENSODEG00000005485	SFPQ	86	87.021	ENSJJAG00000015633	Sfpq	65	87.879	Jaculus_jaculus
ENSODEG00000005485	SFPQ	76	60.952	ENSKMAG00000000238	sfpq	52	62.381	Kryptolebias_marmoratus
ENSODEG00000005485	SFPQ	76	66.908	ENSLBEG00000003163	sfpq	57	66.425	Labrus_bergylta
ENSODEG00000005485	SFPQ	77	63.972	ENSLACG00000014728	SFPQ	68	69.928	Latimeria_chalumnae
ENSODEG00000005485	SFPQ	66	65.753	ENSLOCG00000001067	sfpq	61	68.852	Lepisosteus_oculatus
ENSODEG00000005485	SFPQ	86	87.021	ENSLAFG00000015951	SFPQ	69	87.215	Loxodonta_africana
ENSODEG00000005485	SFPQ	86	86.809	ENSMFAG00000000797	SFPQ	65	87.662	Macaca_fascicularis
ENSODEG00000005485	SFPQ	86	86.809	ENSMMUG00000019154	SFPQ	65	87.662	Macaca_mulatta
ENSODEG00000005485	SFPQ	86	87.021	ENSMNEG00000038895	SFPQ	65	87.879	Macaca_nemestrina
ENSODEG00000005485	SFPQ	59	79.228	ENSMLEG00000010643	-	96	80.119	Mandrillus_leucophaeus
ENSODEG00000005485	SFPQ	54	79.208	ENSMLEG00000035352	-	95	80.198	Mandrillus_leucophaeus
ENSODEG00000005485	SFPQ	96	59.211	ENSMAMG00000007875	sfpq	63	68.434	Mastacembelus_armatus
ENSODEG00000005485	SFPQ	78	63.023	ENSMZEG00005026091	sfpq	62	64.066	Maylandia_zebra
ENSODEG00000005485	SFPQ	65	75.397	ENSMGAG00000004237	SFPQ	96	76.923	Meleagris_gallopavo
ENSODEG00000005485	SFPQ	85	86.207	ENSMAUG00000006402	Sfpq	66	86.797	Mesocricetus_auratus
ENSODEG00000005485	SFPQ	86	87.021	ENSMICG00000027265	SFPQ	66	87.879	Microcebus_murinus
ENSODEG00000005485	SFPQ	86	82.729	ENSMOCG00000019075	Sfpq	96	83.117	Microtus_ochrogaster
ENSODEG00000005485	SFPQ	96	58.148	ENSMMOG00000001074	sfpq	63	65.947	Mola_mola
ENSODEG00000005485	SFPQ	79	83.565	ENSMODG00000017937	SFPQ	63	83.841	Monodelphis_domestica
ENSODEG00000005485	SFPQ	75	66.667	ENSMALG00000010381	sfpq	64	67.895	Monopterus_albus
ENSODEG00000005485	SFPQ	85	86.422	MGP_CAROLIEiJ_G0026487	Sfpq	66	87.013	Mus_caroli
ENSODEG00000005485	SFPQ	85	86.422	ENSMUSG00000028820	Sfpq	66	87.013	Mus_musculus
ENSODEG00000005485	SFPQ	85	86.422	MGP_PahariEiJ_G0028818	Sfpq	66	87.013	Mus_pahari
ENSODEG00000005485	SFPQ	85	86.422	MGP_SPRETEiJ_G0027466	Sfpq	66	87.013	Mus_spretus
ENSODEG00000005485	SFPQ	53	80.392	ENSMPUG00000014931	-	98	81.373	Mustela_putorius_furo
ENSODEG00000005485	SFPQ	79	83.486	ENSMLUG00000027090	SFPQ	94	85.273	Myotis_lucifugus
ENSODEG00000005485	SFPQ	86	85.775	ENSNGAG00000000888	Sfpq	61	86.543	Nannospalax_galili
ENSODEG00000005485	SFPQ	78	63.256	ENSNBRG00000017479	sfpq	62	64.303	Neolamprologus_brichardi
ENSODEG00000005485	SFPQ	59	82.493	ENSNLEG00000035521	-	96	83.383	Nomascus_leucogenys
ENSODEG00000005485	SFPQ	77	83.255	ENSMEUG00000014082	SFPQ	61	83.333	Notamacropus_eugenii
ENSODEG00000005485	SFPQ	91	81.818	ENSOPRG00000013696	SFPQ	60	86.557	Ochotona_princeps
ENSODEG00000005485	SFPQ	91	57.746	ENSONIG00000017737	sfpq	53	73.077	Oreochromis_niloticus
ENSODEG00000005485	SFPQ	59	80.119	ENSOANG00000008789	-	96	81.009	Ornithorhynchus_anatinus
ENSODEG00000005485	SFPQ	92	77.778	ENSOCUG00000001877	SFPQ	84	86.824	Oryctolagus_cuniculus
ENSODEG00000005485	SFPQ	91	57.545	ENSORLG00000007459	sfpq	55	63.158	Oryzias_latipes
ENSODEG00000005485	SFPQ	91	57.143	ENSORLG00015002131	sfpq	56	62.322	Oryzias_latipes_hsok
ENSODEG00000005485	SFPQ	91	55.469	ENSOMEG00000018020	sfpq	55	62.919	Oryzias_melastigma
ENSODEG00000005485	SFPQ	86	87.234	ENSOGAG00000027710	SFPQ	87	87.446	Otolemur_garnettii
ENSODEG00000005485	SFPQ	76	85.646	ENSOARG00000019439	SFPQ	64	86.364	Ovis_aries
ENSODEG00000005485	SFPQ	59	81.471	ENSPPRG00000015478	-	96	82.544	Panthera_pardus
ENSODEG00000005485	SFPQ	59	82.493	ENSPTIG00000007710	-	96	83.383	Panthera_tigris_altaica
ENSODEG00000005485	SFPQ	86	80.638	ENSPTRG00000000518	SFPQ	64	81.385	Pan_troglodytes
ENSODEG00000005485	SFPQ	86	87.021	ENSPANG00000005380	SFPQ	69	87.879	Papio_anubis
ENSODEG00000005485	SFPQ	81	62.921	ENSPKIG00000023035	sfpq	70	69.471	Paramormyrops_kingsleyae
ENSODEG00000005485	SFPQ	76	82.254	ENSPSIG00000011494	SFPQ	97	82.014	Pelodiscus_sinensis
ENSODEG00000005485	SFPQ	74	62.162	ENSPMGG00000023883	sfpq	60	70.303	Periophthalmus_magnuspinnatus
ENSODEG00000005485	SFPQ	81	85.520	ENSPEMG00000009794	Sfpq	91	86.199	Peromyscus_maniculatus_bairdii
ENSODEG00000005485	SFPQ	79	83.527	ENSPCIG00000000923	SFPQ	61	83.568	Phascolarctos_cinereus
ENSODEG00000005485	SFPQ	91	54.949	ENSPFOG00000003127	sfpq	68	60.671	Poecilia_formosa
ENSODEG00000005485	SFPQ	86	87.021	ENSPPYG00000001560	SFPQ	65	87.879	Pongo_abelii
ENSODEG00000005485	SFPQ	74	82.381	ENSPCAG00000006164	SFPQ	58	85.060	Procavia_capensis
ENSODEG00000005485	SFPQ	86	87.021	ENSPCOG00000027127	SFPQ	65	87.879	Propithecus_coquereli
ENSODEG00000005485	SFPQ	86	84.681	ENSPVAG00000001865	SFPQ	66	85.281	Pteropus_vampyrus
ENSODEG00000005485	SFPQ	78	63.023	ENSPNYG00000007494	sfpq	60	64.066	Pundamilia_nyererei
ENSODEG00000005485	SFPQ	89	57.143	ENSPNAG00000002128	sfpq	70	63.972	Pygocentrus_nattereri
ENSODEG00000005485	SFPQ	85	86.422	ENSRNOG00000058461	Sfpq	66	87.013	Rattus_norvegicus
ENSODEG00000005485	SFPQ	89	73.292	ENSRBIG00000035286	SFPQ	96	83.383	Rhinopithecus_bieti
ENSODEG00000005485	SFPQ	81	86.652	ENSRROG00000040992	SFPQ	96	83.383	Rhinopithecus_roxellana
ENSODEG00000005485	SFPQ	58	63.354	ENSSBOG00000033925	-	94	63.208	Saimiri_boliviensis_boliviensis
ENSODEG00000005485	SFPQ	59	82.493	ENSSBOG00000024972	-	96	83.383	Saimiri_boliviensis_boliviensis
ENSODEG00000005485	SFPQ	59	76.786	ENSSHAG00000012312	-	96	76.786	Sarcophilus_harrisii
ENSODEG00000005485	SFPQ	76	78.341	ENSSHAG00000016107	-	94	78.111	Sarcophilus_harrisii
ENSODEG00000005485	SFPQ	95	58.157	ENSSFOG00015009289	sfpq	76	68.545	Scleropages_formosus
ENSODEG00000005485	SFPQ	76	66.746	ENSSMAG00000018201	sfpq	64	65.421	Scophthalmus_maximus
ENSODEG00000005485	SFPQ	76	66.826	ENSSDUG00000008402	sfpq	63	68.345	Seriola_dumerili
ENSODEG00000005485	SFPQ	76	66.826	ENSSLDG00000018917	sfpq	62	69.430	Seriola_lalandi_dorsalis
ENSODEG00000005485	SFPQ	63	83.333	ENSSARG00000006409	SFPQ	96	84.181	Sorex_araneus
ENSODEG00000005485	SFPQ	80	61.693	ENSSPAG00000016550	sfpq	62	65.105	Stegastes_partitus
ENSODEG00000005485	SFPQ	86	86.809	ENSSSCG00000035690	SFPQ	66	87.879	Sus_scrofa
ENSODEG00000005485	SFPQ	76	82.734	ENSTGUG00000001722	SFPQ	97	82.734	Taeniopygia_guttata
ENSODEG00000005485	SFPQ	76	66.106	ENSTRUG00000003783	sfpq	60	68.052	Takifugu_rubripes
ENSODEG00000005485	SFPQ	77	67.139	ENSTNIG00000011331	sfpq	69	66.903	Tetraodon_nigroviridis
ENSODEG00000005485	SFPQ	91	74.890	ENSTBEG00000006238	SFPQ	57	78.442	Tupaia_belangeri
ENSODEG00000005485	SFPQ	86	85.532	ENSTTRG00000013930	SFPQ	62	85.194	Tursiops_truncatus
ENSODEG00000005485	SFPQ	73	100.000	ENSUAMG00000026758	SFPQ	89	100.000	Ursus_americanus
ENSODEG00000005485	SFPQ	59	79.525	ENSUMAG00000008056	-	96	80.415	Ursus_maritimus
ENSODEG00000005485	SFPQ	69	100.000	ENSVPAG00000006960	-	65	77.262	Vicugna_pacos
ENSODEG00000005485	SFPQ	59	77.301	ENSVVUG00000000874	-	96	78.221	Vulpes_vulpes
ENSODEG00000005485	SFPQ	80	70.387	ENSXETG00000009682	sfpq	100	72.360	Xenopus_tropicalis