EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005500 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 2384 bases
Position: chrJH651575.1:998231-1000614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007373	Nop	PF01798.18	1.5e-17	1	1
ENSODEP00000007373	NOP5NT	PF08156.13	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007485	-	786	-	ENSODEP00000007373	262 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005500	-	97	97.628	ENSG00000101361	NOP56	100	87.544	Homo_sapiens
ENSODEG00000005500	-	84	40.541	ENSACAG00000005194	NOP58	50	41.096	Anolis_carolinensis
ENSODEG00000005500	-	95	51.587	WBGene00010627	K07C5.4	52	50.000	Caenorhabditis_elegans
ENSODEG00000005500	-	73	96.875	ENSCAPG00000009320	-	100	96.875	Cavia_aperea
ENSODEG00000005500	-	100	98.092	ENSCPOG00000015315	NOP56	100	98.092	Cavia_porcellus
ENSODEG00000005500	-	99	97.692	ENSCGRG00000013341	-	97	97.692	Cricetulus_griseus_crigri
ENSODEG00000005500	-	82	38.532	ENSDARG00000104353	nop58	63	47.656	Danio_rerio
ENSODEG00000005500	-	97	77.559	ENSDARG00000012820	nop56	82	71.552	Danio_rerio
ENSODEG00000005500	-	97	97.244	ENSDORG00000013918	-	97	97.244	Dipodomys_ordii
ENSODEG00000005500	-	82	38.073	ENSEBUG00000010545	nop58	78	38.073	Eptatretus_burgeri
ENSODEG00000005500	-	97	77.647	ENSIPUG00000011024	nop56	50	77.647	Ictalurus_punctatus
ENSODEG00000005500	-	65	85.294	ENSMGAG00000007493	-	74	85.294	Meleagris_gallopavo
ENSODEG00000005500	-	97	97.628	ENSMICG00000016553	NOP56	53	97.628	Microcebus_murinus
ENSODEG00000005500	-	98	97.276	ENSMOCG00000004225	-	98	97.276	Microtus_ochrogaster
ENSODEG00000005500	-	96	73.016	ENSMMOG00000012293	nop56	77	65.714	Mola_mola
ENSODEG00000005500	-	99	96.911	MGP_CAROLIEiJ_G0024295	Nop56	99	96.911	Mus_caroli
ENSODEG00000005500	-	82	40.179	MGP_CAROLIEiJ_G0014181	Nop58	93	44.366	Mus_caroli
ENSODEG00000005500	-	82	40.179	ENSMUSG00000026020	Nop58	92	44.366	Mus_musculus
ENSODEG00000005500	-	99	96.911	ENSMUSG00000027405	Nop56	99	96.911	Mus_musculus
ENSODEG00000005500	-	82	40.179	MGP_PahariEiJ_G0027419	Nop58	93	44.366	Mus_pahari
ENSODEG00000005500	-	99	96.911	MGP_PahariEiJ_G0025740	Nop56	99	96.911	Mus_pahari
ENSODEG00000005500	-	99	96.911	MGP_SPRETEiJ_G0025215	Nop56	99	96.911	Mus_spretus
ENSODEG00000005500	-	82	40.179	MGP_SPRETEiJ_G0014988	Nop58	93	44.366	Mus_spretus
ENSODEG00000005500	-	97	98.824	ENSNGAG00000020493	-	98	98.824	Nannospalax_galili
ENSODEG00000005500	-	86	39.744	ENSPANG00000005211	NOP58	53	38.839	Papio_anubis
ENSODEG00000005500	-	55	30.719	ENSPCOG00000006096	-	50	30.719	Propithecus_coquereli
ENSODEG00000005500	-	95	47.266	YLR197W	NOP56	51	46.875	Saccharomyces_cerevisiae
ENSODEG00000005500	-	96	79.365	ENSXETG00000014962	nop56	59	79.365	Xenopus_tropicalis
ENSODEG00000005500	-	90	75.424	ENSXCOG00000009216	nop56	52	75.424	Xiphophorus_couchianus