EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 786 bases
Position: chrJH651601.1:4830807-4831592
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007422	SRP19	PF01922.17	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007534	-	345	-	ENSODEP00000007422	114 (aa)	-	-

Gene Model

Click here to download ENSODEG00000005538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005538	-	91	92.308	ENSODEG00000013862	-	79	92.308
ENSODEG00000005538	-	82	94.624	ENSODEG00000019119	-	67	93.814
ENSODEG00000005538	-	66	92.000	ENSODEG00000016828	-	63	92.000
ENSODEG00000005538	-	66	88.000	ENSODEG00000000221	-	68	88.000
ENSODEG00000005538	-	66	94.667	ENSODEG00000005033	-	63	94.667
ENSODEG00000005538	-	66	94.667	ENSODEG00000003165	-	63	94.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005538	-	85	91.753	ENSG00000153037	SRP19	67	91.753	Homo_sapiens
ENSODEG00000005538	-	84	69.792	ENSAPOG00000002199	srp19	67	69.792	Acanthochromis_polyacanthus
ENSODEG00000005538	-	85	90.722	ENSAMEG00000012623	SRP19	66	90.722	Ailuropoda_melanoleuca
ENSODEG00000005538	-	84	67.708	ENSACIG00000005082	srp19	67	67.708	Amphilophus_citrinellus
ENSODEG00000005538	-	84	68.750	ENSAOCG00000002718	srp19	67	68.750	Amphiprion_ocellaris
ENSODEG00000005538	-	84	68.750	ENSAPEG00000022170	srp19	67	68.750	Amphiprion_percula
ENSODEG00000005538	-	84	71.875	ENSATEG00000012472	srp19	67	71.875	Anabas_testudineus
ENSODEG00000005538	-	83	80.000	ENSAPLG00000002624	SRP19	77	80.208	Anas_platyrhynchos
ENSODEG00000005538	-	83	77.895	ENSACAG00000007550	SRP19	66	78.125	Anolis_carolinensis
ENSODEG00000005538	-	86	83.673	ENSANAG00000029862	-	90	83.673	Aotus_nancymaae
ENSODEG00000005538	-	87	68.687	ENSANAG00000030287	-	66	69.149	Aotus_nancymaae
ENSODEG00000005538	-	85	93.814	ENSANAG00000032576	-	67	93.814	Aotus_nancymaae
ENSODEG00000005538	-	89	63.107	ENSACLG00000006259	srp19	92	63.107	Astatotilapia_calliptera
ENSODEG00000005538	-	83	67.368	ENSAMXG00000043011	srp19	67	67.708	Astyanax_mexicanus
ENSODEG00000005538	-	85	90.722	ENSBTAG00000012803	SRP19	67	90.722	Bos_taurus
ENSODEG00000005538	-	73	51.807	WBGene00018159	F37F2.2	58	51.807	Caenorhabditis_elegans
ENSODEG00000005538	-	82	67.742	ENSCJAG00000045531	-	58	67.368	Callithrix_jacchus
ENSODEG00000005538	-	85	92.784	ENSCJAG00000038676	-	63	92.000	Callithrix_jacchus
ENSODEG00000005538	-	85	92.784	ENSCAFG00000031549	SRP19	67	92.784	Canis_familiaris
ENSODEG00000005538	-	82	92.473	ENSCAFG00020022437	-	73	92.784	Canis_lupus_dingo
ENSODEG00000005538	-	88	83.000	ENSCAFG00020004285	-	93	82.857	Canis_lupus_dingo
ENSODEG00000005538	-	85	92.784	ENSCAFG00020014267	-	67	92.784	Canis_lupus_dingo
ENSODEG00000005538	-	85	90.722	ENSCHIG00000017551	SRP19	67	90.722	Capra_hircus
ENSODEG00000005538	-	85	92.784	ENSTSYG00000007875	SRP19	67	92.784	Carlito_syrichta
ENSODEG00000005538	-	60	91.176	ENSCPOG00000036806	SRP19	51	91.176	Cavia_porcellus
ENSODEG00000005538	-	82	70.526	ENSCCAG00000023426	-	60	70.526	Cebus_capucinus
ENSODEG00000005538	-	85	93.814	ENSCCAG00000035651	-	67	93.814	Cebus_capucinus
ENSODEG00000005538	-	85	82.474	ENSCATG00000039250	-	66	82.474	Cercocebus_atys
ENSODEG00000005538	-	82	80.645	ENSCATG00000040513	-	59	81.053	Cercocebus_atys
ENSODEG00000005538	-	93	97.170	ENSCLAG00000004791	-	74	97.170	Chinchilla_lanigera
ENSODEG00000005538	-	93	96.226	ENSCLAG00000016055	-	77	96.226	Chinchilla_lanigera
ENSODEG00000005538	-	85	92.784	ENSCHOG00000013452	SRP19	67	92.784	Choloepus_hoffmanni
ENSODEG00000005538	-	83	77.895	ENSCPBG00000013903	SRP19	67	78.125	Chrysemys_picta_bellii
ENSODEG00000005538	-	85	91.753	ENSCGRG00001020510	Srp19	67	91.753	Cricetulus_griseus_chok1gshd
ENSODEG00000005538	-	85	91.753	ENSCGRG00000008542	-	76	91.753	Cricetulus_griseus_crigri
ENSODEG00000005538	-	86	85.294	ENSCGRG00000010716	-	89	85.294	Cricetulus_griseus_crigri
ENSODEG00000005538	-	84	69.792	ENSCSEG00000010039	srp19	67	69.792	Cynoglossus_semilaevis
ENSODEG00000005538	-	84	70.833	ENSCVAG00000017621	srp19	67	70.833	Cyprinodon_variegatus
ENSODEG00000005538	-	83	70.526	ENSDARG00000035699	srp19	67	70.833	Danio_rerio
ENSODEG00000005538	-	85	92.784	ENSDNOG00000013856	SRP19	67	92.784	Dasypus_novemcinctus
ENSODEG00000005538	-	92	89.524	ENSDORG00000004746	Srp19	82	89.524	Dipodomys_ordii
ENSODEG00000005538	-	75	47.674	FBgn0015298	Srp19	54	48.276	Drosophila_melanogaster
ENSODEG00000005538	-	85	88.660	ENSETEG00000017132	SRP19	67	88.660	Echinops_telfairi
ENSODEG00000005538	-	79	64.444	ENSEBUG00000006613	srp19	69	62.245	Eptatretus_burgeri
ENSODEG00000005538	-	85	89.691	ENSEASG00005015182	SRP19	67	89.691	Equus_asinus_asinus
ENSODEG00000005538	-	85	91.753	ENSEEUG00000007298	SRP19	67	91.753	Erinaceus_europaeus
ENSODEG00000005538	-	84	66.667	ENSELUG00000004594	srp19	67	66.667	Esox_lucius
ENSODEG00000005538	-	83	70.526	ENSELUG00000007958	srp19	67	70.833	Esox_lucius
ENSODEG00000005538	-	85	92.784	ENSFCAG00000025895	SRP19	67	92.784	Felis_catus
ENSODEG00000005538	-	93	96.226	ENSFDAG00000013543	SRP19	74	96.226	Fukomys_damarensis
ENSODEG00000005538	-	71	70.370	ENSFHEG00000000493	srp19	67	69.792	Fundulus_heteroclitus
ENSODEG00000005538	-	84	71.875	ENSGMOG00000003264	srp19	74	71.875	Gadus_morhua
ENSODEG00000005538	-	83	80.000	ENSGALG00000000218	SRP19	67	80.208	Gallus_gallus
ENSODEG00000005538	-	84	69.792	ENSGACG00000001093	srp19	64	69.792	Gasterosteus_aculeatus
ENSODEG00000005538	-	83	78.947	ENSGAGG00000025305	SRP19	67	79.167	Gopherus_agassizii
ENSODEG00000005538	-	84	67.708	ENSHBUG00000006131	srp19	66	67.708	Haplochromis_burtoni
ENSODEG00000005538	-	85	95.876	ENSHGLG00000006075	SRP19	67	95.876	Heterocephalus_glaber_female
ENSODEG00000005538	-	85	95.876	ENSHGLG00100015859	SRP19	67	95.876	Heterocephalus_glaber_male
ENSODEG00000005538	-	84	65.625	ENSHCOG00000013231	srp19	68	65.625	Hippocampus_comes
ENSODEG00000005538	-	83	69.474	ENSIPUG00000025084	srp19	66	71.250	Ictalurus_punctatus
ENSODEG00000005538	-	85	92.784	ENSSTOG00000000348	SRP19	67	92.784	Ictidomys_tridecemlineatus
ENSODEG00000005538	-	85	92.784	ENSJJAG00000017185	Srp19	67	92.784	Jaculus_jaculus
ENSODEG00000005538	-	84	71.875	ENSKMAG00000011155	srp19	67	71.875	Kryptolebias_marmoratus
ENSODEG00000005538	-	84	69.792	ENSLBEG00000026727	srp19	67	69.792	Labrus_bergylta
ENSODEG00000005538	-	83	81.053	ENSLACG00000004459	SRP19	62	81.250	Latimeria_chalumnae
ENSODEG00000005538	-	83	74.737	ENSLOCG00000010302	srp19	67	75.000	Lepisosteus_oculatus
ENSODEG00000005538	-	85	91.753	ENSLAFG00000002564	SRP19	67	91.753	Loxodonta_africana
ENSODEG00000005538	-	82	66.667	ENSMFAG00000040055	-	68	68.085	Macaca_fascicularis
ENSODEG00000005538	-	92	75.238	ENSMFAG00000000554	-	84	79.381	Macaca_fascicularis
ENSODEG00000005538	-	85	79.381	ENSMMUG00000049186	-	65	79.381	Macaca_mulatta
ENSODEG00000005538	-	82	79.570	ENSMMUG00000032515	-	70	80.000	Macaca_mulatta
ENSODEG00000005538	-	82	66.667	ENSMNEG00000040117	-	68	68.085	Macaca_nemestrina
ENSODEG00000005538	-	85	90.722	ENSMNEG00000038714	SRP19	67	90.722	Macaca_nemestrina
ENSODEG00000005538	-	84	70.833	ENSMAMG00000018346	srp19	67	70.833	Mastacembelus_armatus
ENSODEG00000005538	-	84	67.708	ENSMZEG00005001765	srp19	67	67.708	Maylandia_zebra
ENSODEG00000005538	-	83	78.947	ENSMGAG00000006762	SRP19	73	79.167	Meleagris_gallopavo
ENSODEG00000005538	-	88	82.000	ENSMICG00000049202	-	91	81.905	Microcebus_murinus
ENSODEG00000005538	-	85	89.691	ENSMICG00000000399	SRP19	67	89.691	Microcebus_murinus
ENSODEG00000005538	-	85	92.784	ENSMOCG00000006534	Srp19	67	92.784	Microtus_ochrogaster
ENSODEG00000005538	-	86	91.837	ENSMOCG00000010532	-	90	91.837	Microtus_ochrogaster
ENSODEG00000005538	-	84	71.875	ENSMMOG00000010417	srp19	62	71.875	Mola_mola
ENSODEG00000005538	-	83	90.526	ENSMODG00000013278	SRP19	67	90.625	Monodelphis_domestica
ENSODEG00000005538	-	90	66.990	ENSMALG00000003858	srp19	84	66.990	Monopterus_albus
ENSODEG00000005538	-	85	91.753	MGP_CAROLIEiJ_G0022086	Srp19	67	91.753	Mus_caroli
ENSODEG00000005538	-	85	91.753	ENSMUSG00000014504	Srp19	67	91.753	Mus_musculus
ENSODEG00000005538	-	85	91.753	MGP_PahariEiJ_G0018820	Srp19	67	91.753	Mus_pahari
ENSODEG00000005538	-	85	91.753	MGP_SPRETEiJ_G0022998	Srp19	67	91.753	Mus_spretus
ENSODEG00000005538	-	85	91.753	ENSMPUG00000012695	SRP19	66	91.753	Mustela_putorius_furo
ENSODEG00000005538	-	83	87.368	ENSMLUG00000024549	-	69	87.500	Myotis_lucifugus
ENSODEG00000005538	-	85	91.753	ENSMLUG00000014793	-	67	91.753	Myotis_lucifugus
ENSODEG00000005538	-	85	90.722	ENSNGAG00000003440	-	67	90.722	Nannospalax_galili
ENSODEG00000005538	-	81	83.696	ENSNGAG00000014524	-	71	83.696	Nannospalax_galili
ENSODEG00000005538	-	88	82.000	ENSNLEG00000035364	-	92	82.000	Nomascus_leucogenys
ENSODEG00000005538	-	83	91.579	ENSMEUG00000012529	SRP19	74	91.667	Notamacropus_eugenii
ENSODEG00000005538	-	82	92.473	ENSOPRG00000010549	SRP19	74	91.667	Ochotona_princeps
ENSODEG00000005538	-	84	67.708	ENSONIG00000000542	srp19	67	67.708	Oreochromis_niloticus
ENSODEG00000005538	-	83	81.053	ENSOANG00000011139	SRP19	55	81.250	Ornithorhynchus_anatinus
ENSODEG00000005538	-	85	90.722	ENSOCUG00000015639	SRP19	67	90.722	Oryctolagus_cuniculus
ENSODEG00000005538	-	91	70.192	ENSORLG00000028267	srp19	93	70.192	Oryzias_latipes
ENSODEG00000005538	-	91	70.192	ENSORLG00020015201	srp19	93	70.192	Oryzias_latipes_hni
ENSODEG00000005538	-	91	70.192	ENSORLG00015007525	srp19	93	70.192	Oryzias_latipes_hsok
ENSODEG00000005538	-	84	73.958	ENSOMEG00000009178	srp19	68	73.958	Oryzias_melastigma
ENSODEG00000005538	-	85	92.784	ENSOGAG00000008579	SRP19	67	92.784	Otolemur_garnettii
ENSODEG00000005538	-	85	89.691	ENSOARG00000016066	SRP19	67	89.691	Ovis_aries
ENSODEG00000005538	-	85	91.753	ENSPPAG00000037062	SRP19	67	91.753	Pan_paniscus
ENSODEG00000005538	-	85	92.784	ENSPPRG00000015591	SRP19	67	92.784	Panthera_pardus
ENSODEG00000005538	-	85	92.784	ENSPTIG00000021474	SRP19	67	92.784	Panthera_tigris_altaica
ENSODEG00000005538	-	85	91.753	ENSPTRG00000017136	SRP19	67	91.753	Pan_troglodytes
ENSODEG00000005538	-	85	90.722	ENSPANG00000004370	-	67	90.722	Papio_anubis
ENSODEG00000005538	-	85	81.443	ENSPANG00000034740	-	66	81.443	Papio_anubis
ENSODEG00000005538	-	84	69.792	ENSPKIG00000018671	srp19	67	69.792	Paramormyrops_kingsleyae
ENSODEG00000005538	-	83	80.000	ENSPSIG00000013811	SRP19	73	80.208	Pelodiscus_sinensis
ENSODEG00000005538	-	84	69.792	ENSPMGG00000015313	srp19	70	68.750	Periophthalmus_magnuspinnatus
ENSODEG00000005538	-	85	92.784	ENSPEMG00000004412	-	71	92.784	Peromyscus_maniculatus_bairdii
ENSODEG00000005538	-	88	62.000	ENSPMAG00000002685	srp19	70	62.626	Petromyzon_marinus
ENSODEG00000005538	-	83	91.579	ENSPCIG00000010250	SRP19	67	91.667	Phascolarctos_cinereus
ENSODEG00000005538	-	84	69.792	ENSPFOG00000015887	srp19	67	69.792	Poecilia_formosa
ENSODEG00000005538	-	84	69.792	ENSPLAG00000007784	srp19	87	69.474	Poecilia_latipinna
ENSODEG00000005538	-	84	69.792	ENSPMEG00000003056	srp19	87	69.474	Poecilia_mexicana
ENSODEG00000005538	-	84	69.792	ENSPREG00000017307	srp19	67	69.792	Poecilia_reticulata
ENSODEG00000005538	-	85	91.753	ENSPPYG00000029584	SRP19	66	91.753	Pongo_abelii
ENSODEG00000005538	-	84	91.667	ENSPCAG00000000228	SRP19	67	91.667	Procavia_capensis
ENSODEG00000005538	-	85	91.753	ENSPCOG00000023239	SRP19	67	91.753	Propithecus_coquereli
ENSODEG00000005538	-	85	90.722	ENSPVAG00000004895	SRP19	67	90.722	Pteropus_vampyrus
ENSODEG00000005538	-	83	66.316	ENSPNAG00000009392	srp19	70	66.667	Pygocentrus_nattereri
ENSODEG00000005538	-	85	91.753	ENSRNOG00000020204	Srp19	67	91.753	Rattus_norvegicus
ENSODEG00000005538	-	83	82.105	ENSRBIG00000040440	-	90	74.038	Rhinopithecus_bieti
ENSODEG00000005538	-	85	90.722	ENSRBIG00000015627	-	67	90.722	Rhinopithecus_bieti
ENSODEG00000005538	-	83	82.105	ENSRROG00000037054	-	91	74.038	Rhinopithecus_roxellana
ENSODEG00000005538	-	86	69.388	ENSRROG00000037316	-	71	70.833	Rhinopithecus_roxellana
ENSODEG00000005538	-	89	73.529	ENSSBOG00000032685	-	86	76.042	Saimiri_boliviensis_boliviensis
ENSODEG00000005538	-	85	93.814	ENSSBOG00000028071	-	67	93.814	Saimiri_boliviensis_boliviensis
ENSODEG00000005538	-	84	71.875	ENSSFOG00015022139	srp19	67	71.875	Scleropages_formosus
ENSODEG00000005538	-	84	66.667	ENSSMAG00000016803	srp19	67	66.667	Scophthalmus_maximus
ENSODEG00000005538	-	89	69.608	ENSSDUG00000012930	srp19	65	69.608	Seriola_dumerili
ENSODEG00000005538	-	55	68.254	ENSSLDG00000021916	-	51	68.254	Seriola_lalandi_dorsalis
ENSODEG00000005538	-	85	91.753	ENSSARG00000000615	SRP19	67	91.753	Sorex_araneus
ENSODEG00000005538	-	83	85.263	ENSSPUG00000015769	SRP19	66	85.417	Sphenodon_punctatus
ENSODEG00000005538	-	85	91.753	ENSSSCG00000026230	SRP19	67	91.753	Sus_scrofa
ENSODEG00000005538	-	83	80.000	ENSTGUG00000001019	SRP19	66	80.208	Taeniopygia_guttata
ENSODEG00000005538	-	84	72.727	ENSTRUG00000023119	srp19	68	72.727	Takifugu_rubripes
ENSODEG00000005538	-	84	69.792	ENSTNIG00000018880	srp19	67	69.792	Tetraodon_nigroviridis
ENSODEG00000005538	-	84	91.667	ENSTTRG00000001690	SRP19	68	91.667	Tursiops_truncatus
ENSODEG00000005538	-	82	91.398	ENSUAMG00000000111	SRP19	67	91.753	Ursus_americanus
ENSODEG00000005538	-	85	91.753	ENSUMAG00000016997	SRP19	67	91.753	Ursus_maritimus
ENSODEG00000005538	-	85	90.722	ENSVPAG00000006001	SRP19	67	90.722	Vicugna_pacos
ENSODEG00000005538	-	90	87.379	ENSVVUG00000012423	SRP19	88	94.203	Vulpes_vulpes
ENSODEG00000005538	-	84	67.708	ENSXETG00000011993	srp19	68	67.708	Xenopus_tropicalis
ENSODEG00000005538	-	84	70.833	ENSXMAG00000029788	srp19	67	70.833	Xiphophorus_maculatus