EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000005554 (Gene tree)
Gene ID: 101589299
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 32805 bases
Position: chrJH651596.1:1367117-1399921
Accession: 101589299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007445	AARP2CN	PF08142.12	8.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007558	BMS1-201	3868	XM_004636565	ENSODEP00000007445	1275 (aa)	XP_004636622	UPI000333A1D6

Gene Model

Click here to download ENSODEG00000005554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005554	BMS1	99	84.844	ENSG00000165733	BMS1	99	85.625	Homo_sapiens
ENSODEG00000005554	BMS1	71	71.626	ENSAPOG00000002296	bms1	99	59.722	Acanthochromis_polyacanthus
ENSODEG00000005554	BMS1	99	84.059	ENSAMEG00000016834	BMS1	99	84.370	Ailuropoda_melanoleuca
ENSODEG00000005554	BMS1	97	62.220	ENSACIG00000002588	bms1	85	78.250	Amphilophus_citrinellus
ENSODEG00000005554	BMS1	84	69.851	ENSAOCG00000018088	bms1	99	61.813	Amphiprion_ocellaris
ENSODEG00000005554	BMS1	81	71.106	ENSAPEG00000014673	bms1	99	61.414	Amphiprion_percula
ENSODEG00000005554	BMS1	88	67.897	ENSATEG00000023465	bms1	99	61.124	Anabas_testudineus
ENSODEG00000005554	BMS1	96	71.878	ENSAPLG00000003759	BMS1	100	71.948	Anas_platyrhynchos
ENSODEG00000005554	BMS1	99	69.091	ENSACAG00000004537	-	99	70.385	Anolis_carolinensis
ENSODEG00000005554	BMS1	99	84.934	ENSANAG00000023432	BMS1	99	84.934	Aotus_nancymaae
ENSODEG00000005554	BMS1	93	66.342	ENSACLG00000001294	bms1	99	65.981	Astatotilapia_calliptera
ENSODEG00000005554	BMS1	99	86.094	ENSBTAG00000012878	BMS1	99	86.172	Bos_taurus
ENSODEG00000005554	BMS1	82	52.174	WBGene00022021	Y61A9LA.10	99	51.765	Caenorhabditis_elegans
ENSODEG00000005554	BMS1	99	85.246	ENSCJAG00000021705	BMS1	99	85.870	Callithrix_jacchus
ENSODEG00000005554	BMS1	99	84.555	ENSCAFG00000007114	BMS1	99	84.789	Canis_familiaris
ENSODEG00000005554	BMS1	99	84.555	ENSCAFG00020025282	BMS1	99	84.789	Canis_lupus_dingo
ENSODEG00000005554	BMS1	99	85.469	ENSCHIG00000023251	BMS1	99	85.547	Capra_hircus
ENSODEG00000005554	BMS1	100	88.811	ENSCAPG00000008652	BMS1	100	87.784	Cavia_aperea
ENSODEG00000005554	BMS1	100	93.036	ENSCPOG00000000502	BMS1	100	92.013	Cavia_porcellus
ENSODEG00000005554	BMS1	99	70.281	ENSCCAG00000024969	-	99	70.593	Cebus_capucinus
ENSODEG00000005554	BMS1	99	85.402	ENSCATG00000030625	-	99	85.558	Cercocebus_atys
ENSODEG00000005554	BMS1	90	63.692	ENSCATG00000008695	-	97	63.889	Cercocebus_atys
ENSODEG00000005554	BMS1	100	93.354	ENSCLAG00000002446	BMS1	100	93.589	Chinchilla_lanigera
ENSODEG00000005554	BMS1	99	85.714	ENSCSAG00000011118	BMS1	99	85.870	Chlorocebus_sabaeus
ENSODEG00000005554	BMS1	99	82.802	ENSCHOG00000011055	BMS1	99	83.100	Choloepus_hoffmanni
ENSODEG00000005554	BMS1	99	72.398	ENSCPBG00000025581	BMS1	99	72.303	Chrysemys_picta_bellii
ENSODEG00000005554	BMS1	79	59.322	ENSCING00000003181	-	99	59.322	Ciona_intestinalis
ENSODEG00000005554	BMS1	68	55.181	ENSCSAVG00000004113	-	84	60.896	Ciona_savignyi
ENSODEG00000005554	BMS1	99	85.870	ENSCANG00000011609	BMS1	99	86.094	Colobus_angolensis_palliatus
ENSODEG00000005554	BMS1	100	82.788	ENSCGRG00001019461	Bms1	100	82.944	Cricetulus_griseus_chok1gshd
ENSODEG00000005554	BMS1	100	82.788	ENSCGRG00000009016	Bms1	99	82.944	Cricetulus_griseus_crigri
ENSODEG00000005554	BMS1	85	68.944	ENSCVAG00000008371	bms1	96	68.008	Cyprinodon_variegatus
ENSODEG00000005554	BMS1	99	84.538	ENSDNOG00000015761	BMS1	99	84.305	Dasypus_novemcinctus
ENSODEG00000005554	BMS1	99	83.737	ENSDORG00000002982	Bms1	99	83.725	Dipodomys_ordii
ENSODEG00000005554	BMS1	79	58.477	FBgn0036686	CG7728	91	58.924	Drosophila_melanogaster
ENSODEG00000005554	BMS1	85	82.143	ENSETEG00000009554	BMS1	91	82.143	Echinops_telfairi
ENSODEG00000005554	BMS1	99	85.090	ENSEASG00005006894	BMS1	99	85.558	Equus_asinus_asinus
ENSODEG00000005554	BMS1	99	85.324	ENSECAG00000001358	BMS1	99	85.636	Equus_caballus
ENSODEG00000005554	BMS1	89	66.541	ENSELUG00000001756	bms1	96	66.318	Esox_lucius
ENSODEG00000005554	BMS1	99	85.191	ENSFCAG00000011220	BMS1	99	85.347	Felis_catus
ENSODEG00000005554	BMS1	99	70.122	ENSFALG00000006882	BMS1	99	70.526	Ficedula_albicollis
ENSODEG00000005554	BMS1	100	90.596	ENSFDAG00000001422	BMS1	100	90.596	Fukomys_damarensis
ENSODEG00000005554	BMS1	92	67.423	ENSFHEG00000003367	bms1	99	64.907	Fundulus_heteroclitus
ENSODEG00000005554	BMS1	87	65.538	ENSGMOG00000000718	bms1	96	64.887	Gadus_morhua
ENSODEG00000005554	BMS1	99	71.089	ENSGALG00000002624	BMS1	99	71.834	Gallus_gallus
ENSODEG00000005554	BMS1	89	65.434	ENSGACG00000015334	bms1	88	64.875	Gasterosteus_aculeatus
ENSODEG00000005554	BMS1	99	72.118	ENSGAGG00000003467	BMS1	99	72.077	Gopherus_agassizii
ENSODEG00000005554	BMS1	93	66.406	ENSHBUG00000022628	bms1	99	65.794	Haplochromis_burtoni
ENSODEG00000005554	BMS1	100	91.151	ENSHGLG00000000477	BMS1	100	89.804	Heterocephalus_glaber_female
ENSODEG00000005554	BMS1	100	91.229	ENSHGLG00100002176	BMS1	100	89.882	Heterocephalus_glaber_male
ENSODEG00000005554	BMS1	89	67.235	ENSHCOG00000017604	bms1	99	60.532	Hippocampus_comes
ENSODEG00000005554	BMS1	97	72.398	ENSIPUG00000017855	bms1	99	61.128	Ictalurus_punctatus
ENSODEG00000005554	BMS1	99	85.692	ENSSTOG00000015063	BMS1	99	85.792	Ictidomys_tridecemlineatus
ENSODEG00000005554	BMS1	100	84.087	ENSJJAG00000017328	Bms1	100	84.789	Jaculus_jaculus
ENSODEG00000005554	BMS1	57	65.977	ENSKMAG00000021982	bms1	90	65.769	Kryptolebias_marmoratus
ENSODEG00000005554	BMS1	82	71.526	ENSLBEG00000028208	bms1	99	60.108	Labrus_bergylta
ENSODEG00000005554	BMS1	99	61.668	ENSLACG00000001600	BMS1	100	62.375	Latimeria_chalumnae
ENSODEG00000005554	BMS1	84	73.874	ENSLOCG00000012914	bms1	99	62.684	Lepisosteus_oculatus
ENSODEG00000005554	BMS1	99	82.399	ENSLAFG00000006250	BMS1	99	82.087	Loxodonta_africana
ENSODEG00000005554	BMS1	81	89.883	ENSMFAG00000037771	BMS1	97	89.147	Macaca_fascicularis
ENSODEG00000005554	BMS1	90	72.399	ENSMMUG00000007426	-	99	72.571	Macaca_mulatta
ENSODEG00000005554	BMS1	85	67.218	ENSMLEG00000029084	-	97	67.401	Mandrillus_leucophaeus
ENSODEG00000005554	BMS1	99	59.133	ENSMAMG00000020855	bms1	89	70.203	Mastacembelus_armatus
ENSODEG00000005554	BMS1	93	66.148	ENSMZEG00005005663	bms1	99	65.794	Maylandia_zebra
ENSODEG00000005554	BMS1	95	70.626	ENSMGAG00000001170	BMS1	99	70.730	Meleagris_gallopavo
ENSODEG00000005554	BMS1	100	83.178	ENSMAUG00000002195	Bms1	100	83.048	Mesocricetus_auratus
ENSODEG00000005554	BMS1	99	84.034	ENSMICG00000009977	BMS1	99	84.268	Microcebus_murinus
ENSODEG00000005554	BMS1	99	83.073	ENSMOCG00000002038	Bms1	99	83.229	Microtus_ochrogaster
ENSODEG00000005554	BMS1	82	73.223	ENSMMOG00000000977	bms1	99	63.664	Mola_mola
ENSODEG00000005554	BMS1	100	76.475	ENSMODG00000001177	BMS1	99	76.493	Monodelphis_domestica
ENSODEG00000005554	BMS1	89	73.469	ENSMALG00000009680	bms1	99	60.265	Monopterus_albus
ENSODEG00000005554	BMS1	74	95.146	MGP_CAROLIEiJ_G0028785	-	86	95.146	Mus_caroli
ENSODEG00000005554	BMS1	100	83.437	ENSMUSG00000030138	Bms1	100	83.593	Mus_musculus
ENSODEG00000005554	BMS1	100	83.593	MGP_PahariEiJ_G0022539	Bms1	100	83.515	Mus_pahari
ENSODEG00000005554	BMS1	99	83.658	MGP_SPRETEiJ_G0029816	Bms1	99	83.554	Mus_spretus
ENSODEG00000005554	BMS1	99	84.165	ENSMPUG00000017276	BMS1	99	84.243	Mustela_putorius_furo
ENSODEG00000005554	BMS1	99	83.061	ENSMLUG00000003260	BMS1	99	83.632	Myotis_lucifugus
ENSODEG00000005554	BMS1	96	81.772	ENSNGAG00000015258	Bms1	99	75.020	Nannospalax_galili
ENSODEG00000005554	BMS1	99	83.216	ENSNLEG00000015791	BMS1	99	83.997	Nomascus_leucogenys
ENSODEG00000005554	BMS1	81	96.905	ENSOPRG00000005195	BMS1	81	96.905	Ochotona_princeps
ENSODEG00000005554	BMS1	90	68.167	ENSONIG00000007227	bms1	99	65.478	Oreochromis_niloticus
ENSODEG00000005554	BMS1	99	75.875	ENSOANG00000000662	-	99	76.461	Ornithorhynchus_anatinus
ENSODEG00000005554	BMS1	100	85.148	ENSOCUG00000005354	BMS1	99	85.303	Oryctolagus_cuniculus
ENSODEG00000005554	BMS1	83	73.884	ENSORLG00000014655	bms1	98	65.913	Oryzias_latipes
ENSODEG00000005554	BMS1	82	74.194	ENSORLG00020016246	bms1	92	67.915	Oryzias_latipes_hni
ENSODEG00000005554	BMS1	83	74.041	ENSORLG00015014183	bms1	99	61.946	Oryzias_latipes_hsok
ENSODEG00000005554	BMS1	87	68.506	ENSOMEG00000015042	bms1	99	61.285	Oryzias_melastigma
ENSODEG00000005554	BMS1	99	85.303	ENSOGAG00000006511	BMS1	99	85.614	Otolemur_garnettii
ENSODEG00000005554	BMS1	99	85.436	ENSOARG00000003900	BMS1	99	85.514	Ovis_aries
ENSODEG00000005554	BMS1	99	81.109	ENSPPAG00000027837	BMS1	99	81.889	Pan_paniscus
ENSODEG00000005554	BMS1	99	85.269	ENSPPRG00000001311	BMS1	99	85.425	Panthera_pardus
ENSODEG00000005554	BMS1	99	83.476	ENSPTIG00000009652	BMS1	99	83.476	Panthera_tigris_altaica
ENSODEG00000005554	BMS1	99	85.078	ENSPTRG00000002441	BMS1	99	85.859	Pan_troglodytes
ENSODEG00000005554	BMS1	99	70.615	ENSPSIG00000006481	BMS1	99	71.803	Pelodiscus_sinensis
ENSODEG00000005554	BMS1	100	77.025	ENSPEMG00000022467	Bms1	100	76.617	Peromyscus_maniculatus_bairdii
ENSODEG00000005554	BMS1	95	92.617	ENSPCIG00000001339	BMS1	99	92.617	Phascolarctos_cinereus
ENSODEG00000005554	BMS1	86	67.149	ENSPFOG00000015180	bms1	99	59.813	Poecilia_formosa
ENSODEG00000005554	BMS1	85	67.355	ENSPMEG00000023176	bms1	93	66.538	Poecilia_mexicana
ENSODEG00000005554	BMS1	80	73.594	ENSPREG00000002695	bms1	99	63.817	Poecilia_reticulata
ENSODEG00000005554	BMS1	60	81.154	ENSPPYG00000002836	-	99	81.026	Pongo_abelii
ENSODEG00000005554	BMS1	73	93.878	ENSPCAG00000014528	BMS1	73	93.878	Procavia_capensis
ENSODEG00000005554	BMS1	95	80.875	ENSPCOG00000023834	-	99	81.280	Propithecus_coquereli
ENSODEG00000005554	BMS1	99	82.680	ENSPVAG00000000725	BMS1	99	82.353	Pteropus_vampyrus
ENSODEG00000005554	BMS1	87	68.558	ENSPNYG00000018866	bms1	87	66.045	Pundamilia_nyererei
ENSODEG00000005554	BMS1	82	81.629	ENSRNOG00000006576	Bms1	100	82.252	Rattus_norvegicus
ENSODEG00000005554	BMS1	99	83.112	ENSRROG00000040101	BMS1	99	83.984	Rhinopithecus_roxellana
ENSODEG00000005554	BMS1	94	44.045	YPL217C	-	98	46.767	Saccharomyces_cerevisiae
ENSODEG00000005554	BMS1	99	85.803	ENSSBOG00000035778	BMS1	99	86.037	Saimiri_boliviensis_boliviensis
ENSODEG00000005554	BMS1	100	76.529	ENSSHAG00000005062	BMS1	99	76.070	Sarcophilus_harrisii
ENSODEG00000005554	BMS1	99	60.120	ENSSFOG00015022313	bms1	99	61.204	Scleropages_formosus
ENSODEG00000005554	BMS1	89	65.756	ENSSMAG00000019966	bms1	99	60.963	Scophthalmus_maximus
ENSODEG00000005554	BMS1	88	67.799	ENSSDUG00000016875	bms1	99	60.585	Seriola_dumerili
ENSODEG00000005554	BMS1	83	69.807	ENSSLDG00000015199	bms1	99	60.168	Seriola_lalandi_dorsalis
ENSODEG00000005554	BMS1	70	73.163	ENSSARG00000014407	BMS1	100	73.103	Sorex_araneus
ENSODEG00000005554	BMS1	100	71.570	ENSSPUG00000014454	BMS1	99	72.120	Sphenodon_punctatus
ENSODEG00000005554	BMS1	99	85.625	ENSSSCG00000010198	BMS1	99	86.105	Sus_scrofa
ENSODEG00000005554	BMS1	99	69.885	ENSTGUG00000006302	-	99	69.863	Taeniopygia_guttata
ENSODEG00000005554	BMS1	87	63.581	ENSTRUG00000008028	bms1	97	62.246	Takifugu_rubripes
ENSODEG00000005554	BMS1	99	58.385	ENSTNIG00000006216	bms1	89	63.799	Tetraodon_nigroviridis
ENSODEG00000005554	BMS1	61	89.527	ENSTBEG00000001673	-	64	88.562	Tupaia_belangeri
ENSODEG00000005554	BMS1	99	83.490	ENSTTRG00000007983	BMS1	99	83.646	Tursiops_truncatus
ENSODEG00000005554	BMS1	99	84.453	ENSUAMG00000023996	BMS1	99	84.922	Ursus_americanus
ENSODEG00000005554	BMS1	99	84.297	ENSUMAG00000016523	BMS1	99	84.766	Ursus_maritimus
ENSODEG00000005554	BMS1	88	79.682	ENSVPAG00000007477	BMS1	99	79.630	Vicugna_pacos
ENSODEG00000005554	BMS1	99	84.711	ENSVVUG00000021305	BMS1	99	84.945	Vulpes_vulpes
ENSODEG00000005554	BMS1	98	65.114	ENSXETG00000008158	bms1	99	65.888	Xenopus_tropicalis
ENSODEG00000005554	BMS1	85	67.284	ENSXCOG00000000506	bms1	96	76.585	Xiphophorus_couchianus
ENSODEG00000005554	BMS1	85	67.490	ENSXMAG00000014236	bms1	98	65.844	Xiphophorus_maculatus