EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000005556 (Gene tree)
Gene ID: 101571505
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 10847 bases
Position: chrJH651625.1:9273985-9284831
Accession: 101571505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000007449	zf-C2H2	PF00096.26	1.3e-14	1	4
ENSODEP00000007449	zf-C2H2	PF00096.26	1.3e-14	2	4
ENSODEP00000007449	zf-C2H2	PF00096.26	1.3e-14	3	4
ENSODEP00000007449	zf-C2H2	PF00096.26	1.3e-14	4	4
ENSODEP00000007448	zf-C2H2	PF00096.26	8.2e-14	1	4
ENSODEP00000007448	zf-C2H2	PF00096.26	8.2e-14	2	4
ENSODEP00000007448	zf-C2H2	PF00096.26	8.2e-14	3	4
ENSODEP00000007448	zf-C2H2	PF00096.26	8.2e-14	4	4
ENSODEP00000007448	zf-met	PF12874.7	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000007562	ZIC3-202	1401	XM_004639347	ENSODEP00000007449	466 (aa)	XP_004639404	UPI0003336D36
ENSODET00000007561	ZIC3-201	1946	XM_004639348	ENSODEP00000007448	456 (aa)	XP_004639405	UPI000333B30A

Gene Model

Click here to download ENSODEG00000005556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000005556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000005556	ZIC3	61	36.413	ENSODEG00000008889	MYNN	54	39.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000005556	ZIC3	100	98.287	ENSG00000156925	ZIC3	100	98.287	Homo_sapiens
ENSODEG00000005556	ZIC3	100	98.501	ENSANAG00000019614	ZIC3	100	98.501	Aotus_nancymaae
ENSODEG00000005556	ZIC3	100	98.073	ENSCJAG00000013792	ZIC3	100	98.073	Callithrix_jacchus
ENSODEG00000005556	ZIC3	100	98.287	ENSCAFG00000018979	ZIC3	100	98.287	Canis_familiaris
ENSODEG00000005556	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.503	Carlito_syrichta
ENSODEG00000005556	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSODEG00000005556	ZIC3	100	98.287	ENSCCAG00000025983	ZIC3	100	98.287	Cebus_capucinus
ENSODEG00000005556	ZIC3	100	98.287	ENSCATG00000036569	ZIC3	100	98.287	Cercocebus_atys
ENSODEG00000005556	ZIC3	100	99.785	ENSCLAG00000001934	ZIC3	100	99.785	Chinchilla_lanigera
ENSODEG00000005556	ZIC3	93	86.468	ENSCPBG00000026115	ZIC3	100	86.468	Chrysemys_picta_bellii
ENSODEG00000005556	ZIC3	100	98.287	ENSCANG00000017505	ZIC3	100	98.287	Colobus_angolensis_palliatus
ENSODEG00000005556	ZIC3	100	98.712	ENSCGRG00001024527	Zic3	100	98.712	Cricetulus_griseus_chok1gshd
ENSODEG00000005556	ZIC3	100	98.498	ENSDORG00000025481	Zic3	100	98.498	Dipodomys_ordii
ENSODEG00000005556	ZIC3	100	98.287	ENSFCAG00000025684	ZIC3	100	98.287	Felis_catus
ENSODEG00000005556	ZIC3	80	98.922	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSODEG00000005556	ZIC3	94	81.093	ENSGAGG00000004149	ZIC3	92	81.093	Gopherus_agassizii
ENSODEG00000005556	ZIC3	100	98.287	ENSGGOG00000011914	ZIC3	100	98.287	Gorilla_gorilla
ENSODEG00000005556	ZIC3	100	98.069	ENSHGLG00000006298	ZIC3	100	98.069	Heterocephalus_glaber_female
ENSODEG00000005556	ZIC3	67	69.408	ENSHGLG00100002829	ZIC3	100	77.070	Heterocephalus_glaber_male
ENSODEG00000005556	ZIC3	100	99.142	ENSJJAG00000022714	Zic3	100	99.142	Jaculus_jaculus
ENSODEG00000005556	ZIC3	100	76.445	ENSLACG00000014597	ZIC3	100	76.445	Latimeria_chalumnae
ENSODEG00000005556	ZIC3	88	93.917	ENSLAFG00000007048	ZIC3	100	92.965	Loxodonta_africana
ENSODEG00000005556	ZIC3	100	98.287	ENSMFAG00000027018	ZIC3	100	98.287	Macaca_fascicularis
ENSODEG00000005556	ZIC3	100	98.031	ENSMMUG00000002023	ZIC3	100	98.031	Macaca_mulatta
ENSODEG00000005556	ZIC3	100	98.287	ENSMNEG00000040682	ZIC3	100	98.287	Macaca_nemestrina
ENSODEG00000005556	ZIC3	100	98.287	ENSMLEG00000004378	ZIC3	100	98.287	Mandrillus_leucophaeus
ENSODEG00000005556	ZIC3	100	98.498	ENSMAUG00000009402	Zic3	100	98.498	Mesocricetus_auratus
ENSODEG00000005556	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSODEG00000005556	ZIC3	100	98.283	ENSMOCG00000020544	Zic3	100	98.283	Microtus_ochrogaster
ENSODEG00000005556	ZIC3	100	98.283	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSODEG00000005556	ZIC3	100	98.283	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSODEG00000005556	ZIC3	100	98.283	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSODEG00000005556	ZIC3	100	98.283	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSODEG00000005556	ZIC3	100	98.069	ENSNGAG00000023346	Zic3	100	98.069	Nannospalax_galili
ENSODEG00000005556	ZIC3	79	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSODEG00000005556	ZIC3	100	98.287	ENSPPAG00000030013	ZIC3	100	98.287	Pan_paniscus
ENSODEG00000005556	ZIC3	100	98.287	ENSPPRG00000010839	ZIC3	100	98.287	Panthera_pardus
ENSODEG00000005556	ZIC3	100	98.287	ENSPTRG00000043849	ZIC3	100	98.287	Pan_troglodytes
ENSODEG00000005556	ZIC3	100	98.287	ENSPANG00000011357	ZIC3	100	98.287	Papio_anubis
ENSODEG00000005556	ZIC3	100	73.718	ENSPKIG00000017705	zic3	100	73.718	Paramormyrops_kingsleyae
ENSODEG00000005556	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSODEG00000005556	ZIC3	100	98.498	ENSPEMG00000022168	Zic3	100	98.498	Peromyscus_maniculatus_bairdii
ENSODEG00000005556	ZIC3	100	98.501	ENSPCOG00000021557	ZIC3	100	98.501	Propithecus_coquereli
ENSODEG00000005556	ZIC3	100	97.854	ENSRNOG00000000861	Zic3	100	97.854	Rattus_norvegicus
ENSODEG00000005556	ZIC3	100	98.287	ENSRBIG00000030660	ZIC3	100	98.287	Rhinopithecus_bieti
ENSODEG00000005556	ZIC3	100	98.287	ENSRROG00000028410	ZIC3	100	98.287	Rhinopithecus_roxellana
ENSODEG00000005556	ZIC3	100	98.287	ENSSBOG00000024684	ZIC3	100	98.287	Saimiri_boliviensis_boliviensis
ENSODEG00000005556	ZIC3	99	68.884	ENSSFOG00015008079	zic3	100	68.884	Scleropages_formosus
ENSODEG00000005556	ZIC3	99	74.893	ENSSFOG00015011731	zic3	100	74.893	Scleropages_formosus
ENSODEG00000005556	ZIC3	83	83.503	ENSTGUG00000002155	ZIC3	100	83.503	Taeniopygia_guttata
ENSODEG00000005556	ZIC3	100	98.287	ENSVVUG00000021378	ZIC3	100	98.287	Vulpes_vulpes
ENSODEG00000005556	ZIC3	100	76.759	ENSXETG00000024458	zic3	100	76.759	Xenopus_tropicalis